EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015006289 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA2
Alias: -
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 42090 bases
Position: chr9:915905-957994
Accession: 101161713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015025226	ResIII	PF04851.15	1.8e-07	1	1
ENSORLP00015005427	ResIII	PF04851.15	3.1e-07	1	1
ENSORLP00015025226	BRK	PF07533.16	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015005910	SMARCA2-201	6731	XM_023958129	ENSORLP00015025226	1580 (aa)	XP_023813897	-
ENSORLT00015005963	SMARCA2-202	4089	-	ENSORLP00015005427	1362 (aa)	-	-

Gene Model

Click here to download ENSORLG00015006289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015006289	SMARCA2	94	73.191	ENSORLG00015007739	-	97	72.404
ENSORLG00015006289	SMARCA2	95	70.487	ENSORLG00015016560	smarca4a	98	73.997

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006289	SMARCA2	100	78.403	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSORLG00015006289	SMARCA2	100	92.749	ENSAPOG00000002641	SMARCA2	100	92.628	Acanthochromis_polyacanthus
ENSORLG00015006289	SMARCA2	97	86.239	ENSAMEG00000012325	SMARCA2	99	85.301	Ailuropoda_melanoleuca
ENSORLG00015006289	SMARCA2	100	88.534	ENSACIG00000015607	SMARCA2	100	88.312	Amphilophus_citrinellus
ENSORLG00015006289	SMARCA2	100	92.632	ENSAOCG00000009647	-	100	92.506	Amphiprion_ocellaris
ENSORLG00015006289	SMARCA2	100	92.875	ENSAPEG00000007646	SMARCA2	100	92.817	Amphiprion_percula
ENSORLG00015006289	SMARCA2	99	92.327	ENSATEG00000006916	SMARCA2	98	92.061	Anabas_testudineus
ENSORLG00015006289	SMARCA2	99	76.297	ENSAPLG00000013873	SMARCA2	95	77.055	Anas_platyrhynchos
ENSORLG00015006289	SMARCA2	100	79.561	ENSACAG00000002423	SMARCA2	100	79.373	Anolis_carolinensis
ENSORLG00015006289	SMARCA2	97	89.779	ENSANAG00000026498	SMARCA2	100	79.824	Aotus_nancymaae
ENSORLG00015006289	SMARCA2	100	90.221	ENSACLG00000004248	SMARCA2	100	90.032	Astatotilapia_calliptera
ENSORLG00015006289	SMARCA2	99	85.125	ENSAMXG00000012404	smarca2	100	84.040	Astyanax_mexicanus
ENSORLG00015006289	SMARCA2	100	79.112	ENSBTAG00000007494	SMARCA2	100	79.635	Bos_taurus
ENSORLG00015006289	SMARCA2	98	91.008	ENSCJAG00000010710	SMARCA2	99	80.561	Callithrix_jacchus
ENSORLG00015006289	SMARCA2	100	79.188	ENSCAFG00000002013	SMARCA2	100	79.498	Canis_familiaris
ENSORLG00015006289	SMARCA2	76	85.308	ENSCAFG00020026802	SMARCA2	94	86.695	Canis_lupus_dingo
ENSORLG00015006289	SMARCA2	100	79.237	ENSCHIG00000025863	SMARCA2	100	79.635	Capra_hircus
ENSORLG00015006289	SMARCA2	97	91.310	ENSTSYG00000003858	SMARCA2	99	80.127	Carlito_syrichta
ENSORLG00015006289	SMARCA2	97	78.063	ENSCAPG00000002890	SMARCA2	99	77.827	Cavia_aperea
ENSORLG00015006289	SMARCA2	97	80.299	ENSCPOG00000005475	SMARCA2	100	80.176	Cavia_porcellus
ENSORLG00015006289	SMARCA2	98	89.510	ENSCCAG00000030636	SMARCA2	100	79.825	Cebus_capucinus
ENSORLG00015006289	SMARCA2	98	89.237	ENSCATG00000031470	SMARCA2	100	79.573	Cercocebus_atys
ENSORLG00015006289	SMARCA2	100	79.198	ENSCLAG00000014484	SMARCA2	100	79.912	Chinchilla_lanigera
ENSORLG00015006289	SMARCA2	99	77.817	ENSCSAG00000008650	SMARCA2	99	80.844	Chlorocebus_sabaeus
ENSORLG00015006289	SMARCA2	88	82.430	ENSCHOG00000004316	SMARCA2	86	81.969	Choloepus_hoffmanni
ENSORLG00015006289	SMARCA2	97	91.310	ENSCPBG00000025463	SMARCA2	100	83.024	Chrysemys_picta_bellii
ENSORLG00015006289	SMARCA2	95	90.872	ENSCANG00000039597	SMARCA2	100	79.887	Colobus_angolensis_palliatus
ENSORLG00015006289	SMARCA2	95	83.787	ENSCGRG00001002323	Smarca2	100	74.969	Cricetulus_griseus_chok1gshd
ENSORLG00015006289	SMARCA2	99	85.522	ENSCSEG00000019311	SMARCA2	98	85.138	Cynoglossus_semilaevis
ENSORLG00015006289	SMARCA2	94	88.729	ENSCVAG00000016571	SMARCA2	98	88.729	Cyprinodon_variegatus
ENSORLG00015006289	SMARCA2	100	84.033	ENSDARG00000008904	smarca2	100	83.104	Danio_rerio
ENSORLG00015006289	SMARCA2	97	91.310	ENSDNOG00000006402	SMARCA2	100	79.624	Dasypus_novemcinctus
ENSORLG00015006289	SMARCA2	97	79.015	ENSDORG00000014832	Smarca2	100	80.100	Dipodomys_ordii
ENSORLG00015006289	SMARCA2	75	63.208	FBgn0000212	brm	76	59.657	Drosophila_melanogaster
ENSORLG00015006289	SMARCA2	99	70.636	ENSEBUG00000011442	-	97	68.221	Eptatretus_burgeri
ENSORLG00015006289	SMARCA2	86	60.337	ENSEBUG00000002449	-	96	61.320	Eptatretus_burgeri
ENSORLG00015006289	SMARCA2	100	79.125	ENSEASG00005010312	SMARCA2	100	79.774	Equus_asinus_asinus
ENSORLG00015006289	SMARCA2	61	91.176	ENSEEUG00000015540	-	69	79.730	Erinaceus_europaeus
ENSORLG00015006289	SMARCA2	99	81.865	ENSELUG00000010318	smarca2	99	81.447	Esox_lucius
ENSORLG00015006289	SMARCA2	99	79.822	ENSFCAG00000001568	SMARCA2	100	79.274	Felis_catus
ENSORLG00015006289	SMARCA2	100	78.585	ENSFALG00000010416	SMARCA2	100	81.014	Ficedula_albicollis
ENSORLG00015006289	SMARCA2	97	78.998	ENSFDAG00000010502	SMARCA2	100	78.231	Fukomys_damarensis
ENSORLG00015006289	SMARCA2	100	90.682	ENSFHEG00000021250	SMARCA2	100	90.807	Fundulus_heteroclitus
ENSORLG00015006289	SMARCA2	99	82.435	ENSGMOG00000014229	SMARCA2	99	82.245	Gadus_morhua
ENSORLG00015006289	SMARCA2	100	79.229	ENSGALG00000010164	SMARCA2	100	79.687	Gallus_gallus
ENSORLG00015006289	SMARCA2	94	86.738	ENSGAFG00000001164	SMARCA2	95	82.011	Gambusia_affinis
ENSORLG00015006289	SMARCA2	99	87.556	ENSGACG00000014488	SMARCA2	99	87.111	Gasterosteus_aculeatus
ENSORLG00015006289	SMARCA2	97	91.310	ENSGAGG00000024412	SMARCA2	100	79.399	Gopherus_agassizii
ENSORLG00015006289	SMARCA2	91	86.052	ENSGGOG00000000513	SMARCA2	100	77.848	Gorilla_gorilla
ENSORLG00015006289	SMARCA2	100	91.201	ENSHBUG00000006691	SMARCA2	100	91.075	Haplochromis_burtoni
ENSORLG00015006289	SMARCA2	96	77.128	ENSHGLG00000005215	SMARCA2	98	79.936	Heterocephalus_glaber_female
ENSORLG00015006289	SMARCA2	97	79.768	ENSHGLG00100010496	SMARCA2	100	79.987	Heterocephalus_glaber_male
ENSORLG00015006289	SMARCA2	99	82.119	ENSHCOG00000015348	-	95	87.606	Hippocampus_comes
ENSORLG00015006289	SMARCA2	99	83.260	ENSIPUG00000011060	smarca2	100	81.235	Ictalurus_punctatus
ENSORLG00015006289	SMARCA2	97	79.793	ENSSTOG00000006812	SMARCA2	100	79.699	Ictidomys_tridecemlineatus
ENSORLG00015006289	SMARCA2	97	78.708	ENSJJAG00000010867	Smarca2	100	79.598	Jaculus_jaculus
ENSORLG00015006289	SMARCA2	100	91.635	ENSKMAG00000015844	-	100	91.511	Kryptolebias_marmoratus
ENSORLG00015006289	SMARCA2	51	62.357	ENSLACG00000000270	SMARCA2	99	67.769	Latimeria_chalumnae
ENSORLG00015006289	SMARCA2	97	83.227	ENSLOCG00000011499	smarca2	99	82.331	Lepisosteus_oculatus
ENSORLG00015006289	SMARCA2	97	78.978	ENSLAFG00000014061	SMARCA2	100	79.128	Loxodonta_africana
ENSORLG00015006289	SMARCA2	98	90.872	ENSMFAG00000003814	SMARCA2	100	79.547	Macaca_fascicularis
ENSORLG00015006289	SMARCA2	98	90.872	ENSMMUG00000015279	SMARCA2	100	79.887	Macaca_mulatta
ENSORLG00015006289	SMARCA2	98	90.872	ENSMNEG00000041069	SMARCA2	100	79.635	Macaca_nemestrina
ENSORLG00015006289	SMARCA2	98	90.872	ENSMLEG00000027418	SMARCA2	100	79.358	Mandrillus_leucophaeus
ENSORLG00015006289	SMARCA2	100	91.142	ENSMAMG00000003056	SMARCA2	100	91.068	Mastacembelus_armatus
ENSORLG00015006289	SMARCA2	100	91.688	ENSMZEG00005020709	SMARCA2	100	91.499	Maylandia_zebra
ENSORLG00015006289	SMARCA2	85	63.144	ENSMGAG00000005160	-	100	67.635	Meleagris_gallopavo
ENSORLG00015006289	SMARCA2	97	89.669	ENSMICG00000005162	SMARCA2	100	79.774	Microcebus_murinus
ENSORLG00015006289	SMARCA2	97	79.217	ENSMOCG00000001611	Smarca2	100	79.862	Microtus_ochrogaster
ENSORLG00015006289	SMARCA2	99	87.698	ENSMMOG00000014196	SMARCA2	99	85.176	Mola_mola
ENSORLG00015006289	SMARCA2	100	79.167	ENSMODG00000003578	SMARCA2	100	79.762	Monodelphis_domestica
ENSORLG00015006289	SMARCA2	99	90.044	ENSMALG00000009611	SMARCA2	99	89.345	Monopterus_albus
ENSORLG00015006289	SMARCA2	95	90.872	MGP_CAROLIEiJ_G0022841	Smarca2	100	79.513	Mus_caroli
ENSORLG00015006289	SMARCA2	95	90.872	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSORLG00015006289	SMARCA2	96	80.809	MGP_PahariEiJ_G0014334	Smarca2	100	79.612	Mus_pahari
ENSORLG00015006289	SMARCA2	95	90.872	MGP_SPRETEiJ_G0023759	Smarca2	96	90.909	Mus_spretus
ENSORLG00015006289	SMARCA2	79	84.867	ENSMPUG00000005171	SMARCA2	94	84.945	Mustela_putorius_furo
ENSORLG00015006289	SMARCA2	97	83.902	ENSMLUG00000002342	SMARCA2	99	76.038	Myotis_lucifugus
ENSORLG00015006289	SMARCA2	95	90.191	ENSNGAG00000000108	Smarca2	99	78.321	Nannospalax_galili
ENSORLG00015006289	SMARCA2	93	79.770	ENSNBRG00000017998	SMARCA2	94	85.623	Neolamprologus_brichardi
ENSORLG00015006289	SMARCA2	98	90.736	ENSNLEG00000008575	SMARCA2	100	78.818	Nomascus_leucogenys
ENSORLG00015006289	SMARCA2	99	72.844	ENSMEUG00000009812	SMARCA2	100	73.118	Notamacropus_eugenii
ENSORLG00015006289	SMARCA2	79	81.013	ENSOPRG00000013474	SMARCA2	100	75.421	Ochotona_princeps
ENSORLG00015006289	SMARCA2	97	77.990	ENSODEG00000005452	SMARCA2	98	79.721	Octodon_degus
ENSORLG00015006289	SMARCA2	99	90.840	ENSONIG00000014163	SMARCA2	99	90.840	Oreochromis_niloticus
ENSORLG00015006289	SMARCA2	79	86.155	ENSOCUG00000006320	SMARCA2	100	79.200	Oryctolagus_cuniculus
ENSORLG00015006289	SMARCA2	100	99.620	ENSORLG00000020820	SMARCA2	100	99.620	Oryzias_latipes
ENSORLG00015006289	SMARCA2	100	96.582	ENSOMEG00000009736	-	100	96.582	Oryzias_melastigma
ENSORLG00015006289	SMARCA2	99	77.909	ENSOGAG00000017053	SMARCA2	99	78.643	Otolemur_garnettii
ENSORLG00015006289	SMARCA2	99	76.815	ENSOARG00000013265	SMARCA2	100	79.057	Ovis_aries
ENSORLG00015006289	SMARCA2	93	85.989	ENSPPAG00000038717	SMARCA2	100	78.855	Pan_paniscus
ENSORLG00015006289	SMARCA2	99	79.886	ENSPPRG00000001879	SMARCA2	100	79.336	Panthera_pardus
ENSORLG00015006289	SMARCA2	98	90.872	ENSPTRG00000051168	SMARCA2	100	79.762	Pan_troglodytes
ENSORLG00015006289	SMARCA2	100	75.109	ENSPANG00000025121	SMARCA2	100	75.830	Papio_anubis
ENSORLG00015006289	SMARCA2	100	84.320	ENSPKIG00000018469	-	100	83.375	Paramormyrops_kingsleyae
ENSORLG00015006289	SMARCA2	100	79.323	ENSPSIG00000006284	SMARCA2	100	79.062	Pelodiscus_sinensis
ENSORLG00015006289	SMARCA2	99	83.035	ENSPMGG00000013696	-	98	81.824	Periophthalmus_magnuspinnatus
ENSORLG00015006289	SMARCA2	97	78.377	ENSPEMG00000019821	Smarca2	100	79.211	Peromyscus_maniculatus_bairdii
ENSORLG00015006289	SMARCA2	97	78.729	ENSPMAG00000005337	-	97	69.853	Petromyzon_marinus
ENSORLG00015006289	SMARCA2	100	79.229	ENSPCIG00000015658	SMARCA2	100	79.887	Phascolarctos_cinereus
ENSORLG00015006289	SMARCA2	100	90.915	ENSPFOG00000001856	SMARCA2	100	90.414	Poecilia_formosa
ENSORLG00015006289	SMARCA2	99	90.576	ENSPLAG00000017829	SMARCA2	96	90.133	Poecilia_latipinna
ENSORLG00015006289	SMARCA2	99	90.506	ENSPMEG00000001815	-	99	89.894	Poecilia_mexicana
ENSORLG00015006289	SMARCA2	100	89.900	ENSPREG00000013800	SMARCA2	100	89.526	Poecilia_reticulata
ENSORLG00015006289	SMARCA2	99	77.730	ENSPPYG00000019258	SMARCA2	100	79.686	Pongo_abelii
ENSORLG00015006289	SMARCA2	76	75.352	ENSPCAG00000016969	SMARCA2	78	75.352	Procavia_capensis
ENSORLG00015006289	SMARCA2	98	86.785	ENSPCOG00000025709	SMARCA2	100	77.764	Propithecus_coquereli
ENSORLG00015006289	SMARCA2	90	81.476	ENSPVAG00000000901	SMARCA2	94	81.280	Pteropus_vampyrus
ENSORLG00015006289	SMARCA2	100	87.814	ENSPNYG00000004533	SMARCA2	100	87.751	Pundamilia_nyererei
ENSORLG00015006289	SMARCA2	99	84.927	ENSPNAG00000014635	smarca2	98	84.737	Pygocentrus_nattereri
ENSORLG00015006289	SMARCA2	94	91.436	ENSRNOG00000011931	Smarca2	100	78.726	Rattus_norvegicus
ENSORLG00015006289	SMARCA2	95	90.996	ENSRBIG00000038618	SMARCA2	95	85.759	Rhinopithecus_bieti
ENSORLG00015006289	SMARCA2	95	90.996	ENSRROG00000019271	SMARCA2	99	80.606	Rhinopithecus_roxellana
ENSORLG00015006289	SMARCA2	93	85.839	ENSSBOG00000034827	SMARCA2	100	78.792	Saimiri_boliviensis_boliviensis
ENSORLG00015006289	SMARCA2	97	79.196	ENSSHAG00000007884	SMARCA2	100	79.687	Sarcophilus_harrisii
ENSORLG00015006289	SMARCA2	99	83.321	ENSSFOG00015014870	SMARCA2	97	84.615	Scleropages_formosus
ENSORLG00015006289	SMARCA2	100	90.218	ENSSMAG00000013707	SMARCA2	100	90.654	Scophthalmus_maximus
ENSORLG00015006289	SMARCA2	100	89.748	ENSSDUG00000008852	-	100	89.626	Seriola_dumerili
ENSORLG00015006289	SMARCA2	99	87.237	ENSSLDG00000025449	SMARCA2	98	86.854	Seriola_lalandi_dorsalis
ENSORLG00015006289	SMARCA2	88	84.859	ENSSARG00000007888	SMARCA2	90	74.207	Sorex_araneus
ENSORLG00015006289	SMARCA2	95	76.933	ENSSPUG00000001629	SMARCA2	98	77.024	Sphenodon_punctatus
ENSORLG00015006289	SMARCA2	100	93.082	ENSSPAG00000020091	-	100	92.830	Stegastes_partitus
ENSORLG00015006289	SMARCA2	97	79.217	ENSSSCG00000005232	SMARCA2	100	79.824	Sus_scrofa
ENSORLG00015006289	SMARCA2	97	78.676	ENSTGUG00000005460	SMARCA2	100	79.373	Taeniopygia_guttata
ENSORLG00015006289	SMARCA2	100	87.547	ENSTRUG00000015619	SMARCA2	100	88.113	Takifugu_rubripes
ENSORLG00015006289	SMARCA2	64	97.619	ENSTBEG00000008767	SMARCA2	68	97.619	Tupaia_belangeri
ENSORLG00015006289	SMARCA2	99	77.145	ENSTTRG00000002033	SMARCA2	95	80.157	Tursiops_truncatus
ENSORLG00015006289	SMARCA2	97	91.436	ENSUAMG00000024701	SMARCA2	99	79.802	Ursus_americanus
ENSORLG00015006289	SMARCA2	90	74.552	ENSVPAG00000001204	SMARCA2	98	73.398	Vicugna_pacos
ENSORLG00015006289	SMARCA2	76	85.133	ENSVVUG00000004598	SMARCA2	96	86.535	Vulpes_vulpes
ENSORLG00015006289	SMARCA2	100	76.420	ENSXETG00000015299	smarca2	100	75.337	Xenopus_tropicalis
ENSORLG00015006289	SMARCA2	99	88.333	ENSXCOG00000011073	SMARCA2	99	88.116	Xiphophorus_couchianus
ENSORLG00015006289	SMARCA2	100	89.608	ENSXMAG00000015611	SMARCA2	100	89.297	Xiphophorus_maculatus