EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015006302 (Gene tree)
Gene ID
-
Gene Symbol
ythdf1
Alias
-
Full Name
YTH N(6)-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Plus strand
Length
10435 bases
Position
chr7:22250872-22261306
Accession
ZDB-GENE-040426-2786
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015005515YTHPF04146.153.9e-4111
ENSORLP00015025281YTHPF04146.154e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015005818-3640-ENSORLP00015005515609 (aa)--
ENSORLT00015005800-3954-ENSORLP00015025281615 (aa)--
Gene Model
Click here to download ENSORLG00015006302's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006302's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015006302ythdf19973.618ENSORLG00015018321YTHDF19975.323
ENSORLG00015006302ythdf19457.311ENSORLG00015012539ythdf29457.329
ENSORLG00015006302ythdf19756.210ENSORLG00015014880ythdf39757.305
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015006302ythdf19570.377ENSG00000149658YTHDF19670.069Homo_sapiens
ENSORLG00015006302ythdf19974.127ENSAPOG00000010796YTHDF19976.603Acanthochromis_polyacanthus
ENSORLG00015006302ythdf110089.068ENSAPOG00000004358ythdf110090.032Acanthochromis_polyacanthus
ENSORLG00015006302ythdf19580.952ENSACIG00000011264ythdf19681.122Amphilophus_citrinellus
ENSORLG00015006302ythdf19574.530ENSACIG00000020083YTHDF19675.606Amphilophus_citrinellus
ENSORLG00015006302ythdf19974.603ENSAOCG00000012567YTHDF19976.442Amphiprion_ocellaris
ENSORLG00015006302ythdf110089.372ENSAOCG00000022251ythdf110090.499Amphiprion_ocellaris
ENSORLG00015006302ythdf110089.372ENSAPEG00000021878ythdf110090.499Amphiprion_percula
ENSORLG00015006302ythdf19974.762ENSAPEG00000008750YTHDF19976.603Amphiprion_percula
ENSORLG00015006302ythdf110088.799ENSATEG00000023840ythdf110090.260Anabas_testudineus
ENSORLG00015006302ythdf19976.274ENSATEG00000005996YTHDF19976.480Anabas_testudineus
ENSORLG00015006302ythdf19471.875ENSAPLG00000005985YTHDF19571.579Anas_platyrhynchos
ENSORLG00015006302ythdf19570.719ENSACAG00000005560YTHDF19670.568Anolis_carolinensis
ENSORLG00015006302ythdf19570.034ENSANAG00000034786-9670.937Aotus_nancymaae
ENSORLG00015006302ythdf19759.322ENSANAG00000021022-9659.107Aotus_nancymaae
ENSORLG00015006302ythdf19976.726ENSACLG00000025518YTHDF19977.492Astatotilapia_calliptera
ENSORLG00015006302ythdf19569.483ENSBTAG00000010383YTHDF19670.307Bos_taurus
ENSORLG00015006302ythdf19569.863ENSCJAG00000010056YTHDF19670.121Callithrix_jacchus
ENSORLG00015006302ythdf18669.697ENSCAFG00000012772YTHDF19670.307Canis_familiaris
ENSORLG00015006302ythdf18669.697ENSCAFG00020001214YTHDF19670.307Canis_lupus_dingo
ENSORLG00015006302ythdf19568.276ENSCHIG00000026494YTHDF19669.550Capra_hircus
ENSORLG00015006302ythdf19271.530ENSTSYG00000033436YTHDF19471.147Carlito_syrichta
ENSORLG00015006302ythdf19370.599ENSCAPG00000002544YTHDF19071.403Cavia_aperea
ENSORLG00015006302ythdf19569.707ENSCPOG00000010202YTHDF19670.711Cavia_porcellus
ENSORLG00015006302ythdf19769.764ENSCCAG00000024650YTHDF19670.242Cebus_capucinus
ENSORLG00015006302ythdf19570.377ENSCATG00000033272YTHDF19670.761Cercocebus_atys
ENSORLG00015006302ythdf19570.890ENSCLAG00000005989YTHDF19670.415Chinchilla_lanigera
ENSORLG00015006302ythdf19570.377ENSCSAG00000016266YTHDF19670.761Chlorocebus_sabaeus
ENSORLG00015006302ythdf19572.089ENSCPBG00000027183YTHDF19671.799Chrysemys_picta_bellii
ENSORLG00015006302ythdf19470.312ENSCANG00000029082YTHDF19570.526Colobus_angolensis_palliatus
ENSORLG00015006302ythdf19770.826ENSCGRG00001016568Ythdf19670.069Cricetulus_griseus_chok1gshd
ENSORLG00015006302ythdf19470.979ENSCGRG00000009207Ythdf19670.070Cricetulus_griseus_crigri
ENSORLG00015006302ythdf19582.759ENSCSEG00000020623YTHDF19781.897Cynoglossus_semilaevis
ENSORLG00015006302ythdf19976.083ENSCVAG00000014378YTHDF19976.849Cyprinodon_variegatus
ENSORLG00015006302ythdf110087.013ENSCVAG00000017940ythdf110087.987Cyprinodon_variegatus
ENSORLG00015006302ythdf19979.058ENSDARG00000016447ythdf19980.583Danio_rerio
ENSORLG00015006302ythdf19569.863ENSDNOG00000043590YTHDF19670.761Dasypus_novemcinctus
ENSORLG00015006302ythdf19269.039ENSDORG00000002879Ythdf19169.643Dipodomys_ordii
ENSORLG00015006302ythdf18056.863ENSETEG00000017860-9654.902Echinops_telfairi
ENSORLG00015006302ythdf19868.896ENSEASG00005023186YTHDF19669.896Equus_asinus_asinus
ENSORLG00015006302ythdf19769.374ENSECAG00000019475YTHDF19670.498Equus_caballus
ENSORLG00015006302ythdf18771.186ENSEEUG00000007461YTHDF19670.209Erinaceus_europaeus
ENSORLG00015006302ythdf19981.981ENSELUG00000022768ythdf19983.657Esox_lucius
ENSORLG00015006302ythdf19970.923ENSELUG00000001906YTHDF19673.469Esox_lucius
ENSORLG00015006302ythdf19571.233ENSFALG00000010463YTHDF19671.280Ficedula_albicollis
ENSORLG00015006302ythdf19569.863ENSFDAG00000019602YTHDF19669.707Fukomys_damarensis
ENSORLG00015006302ythdf110087.480ENSFHEG00000023218ythdf110088.293Fundulus_heteroclitus
ENSORLG00015006302ythdf19975.676ENSFHEG00000002540YTHDF19976.320Fundulus_heteroclitus
ENSORLG00015006302ythdf19980.619ENSGMOG00000019610ythdf15583.965Gadus_morhua
ENSORLG00015006302ythdf19571.747ENSGALG00000005745YTHDF19671.648Gallus_gallus
ENSORLG00015006302ythdf19973.817ENSGAFG00000021100YTHDF19976.480Gambusia_affinis
ENSORLG00015006302ythdf19774.593ENSGACG00000002613YTHDF19774.958Gasterosteus_aculeatus
ENSORLG00015006302ythdf19987.685ENSGACG00000012014ythdf19987.685Gasterosteus_aculeatus
ENSORLG00015006302ythdf19572.089ENSGAGG00000003007YTHDF19671.799Gopherus_agassizii
ENSORLG00015006302ythdf19570.890ENSGGOG00000008340YTHDF19670.415Gorilla_gorilla
ENSORLG00015006302ythdf19976.565ENSHBUG00000004875YTHDF19977.331Haplochromis_burtoni
ENSORLG00015006302ythdf19989.525ENSHBUG00000011284ythdf19888.997Haplochromis_burtoni
ENSORLG00015006302ythdf19570.205ENSHGLG00000006585YTHDF19670.121Heterocephalus_glaber_female
ENSORLG00015006302ythdf19570.205ENSHGLG00100004683YTHDF19670.121Heterocephalus_glaber_male
ENSORLG00015006302ythdf19975.281ENSHCOG00000011303YTHDF19975.723Hippocampus_comes
ENSORLG00015006302ythdf19784.667ENSHCOG00000008866ythdf19783.844Hippocampus_comes
ENSORLG00015006302ythdf19978.282ENSIPUG00000000425Ythdf19977.544Ictalurus_punctatus
ENSORLG00015006302ythdf19469.338ENSSTOG00000023001YTHDF19670.526Ictidomys_tridecemlineatus
ENSORLG00015006302ythdf19470.629ENSJJAG00000013589Ythdf19670.599Jaculus_jaculus
ENSORLG00015006302ythdf19976.006ENSKMAG00000017472YTHDF19976.688Kryptolebias_marmoratus
ENSORLG00015006302ythdf110088.235ENSKMAG00000005595ythdf110088.235Kryptolebias_marmoratus
ENSORLG00015006302ythdf19974.525ENSLBEG00000012068YTHDF19976.122Labrus_bergylta
ENSORLG00015006302ythdf110089.431ENSLBEG00000014105ythdf110090.407Labrus_bergylta
ENSORLG00015006302ythdf19371.201ENSLACG00000014195YTHDF19572.072Latimeria_chalumnae
ENSORLG00015006302ythdf19972.787ENSLOCG00000005020ythdf19973.311Lepisosteus_oculatus
ENSORLG00015006302ythdf19570.790ENSLAFG00000008884YTHDF19670.242Loxodonta_africana
ENSORLG00015006302ythdf19570.377ENSMFAG00000042868YTHDF19670.761Macaca_fascicularis
ENSORLG00015006302ythdf19570.377ENSMMUG00000009227YTHDF19670.761Macaca_mulatta
ENSORLG00015006302ythdf19570.377ENSMNEG00000030851YTHDF19670.761Macaca_nemestrina
ENSORLG00015006302ythdf19570.719ENSMLEG00000009252YTHDF19670.775Mandrillus_leucophaeus
ENSORLG00015006302ythdf19976.115ENSMAMG00000011072YTHDF19975.917Mastacembelus_armatus
ENSORLG00015006302ythdf110087.765ENSMAMG00000024255ythdf110087.928Mastacembelus_armatus
ENSORLG00015006302ythdf110089.560ENSMZEG00005026397ythdf110089.886Maylandia_zebra
ENSORLG00015006302ythdf19976.565ENSMZEG00005023596YTHDF19977.331Maylandia_zebra
ENSORLG00015006302ythdf19570.962ENSMGAG00000006139YTHDF19670.660Meleagris_gallopavo
ENSORLG00015006302ythdf19570.962ENSMAUG00000017660Ythdf19670.069Mesocricetus_auratus
ENSORLG00015006302ythdf19569.759ENSMICG00000032266YTHDF19669.550Microcebus_murinus
ENSORLG00015006302ythdf19570.962ENSMOCG00000013573Ythdf19670.069Microtus_ochrogaster
ENSORLG00015006302ythdf19584.848ENSMMOG00000017500ythdf19585.185Mola_mola
ENSORLG00015006302ythdf19974.802ENSMMOG00000020467YTHDF19975.000Mola_mola
ENSORLG00015006302ythdf18672.243ENSMODG00000016842YTHDF19672.222Monodelphis_domestica
ENSORLG00015006302ythdf110087.258ENSMALG00000015672ythdf110088.226Monopterus_albus
ENSORLG00015006302ythdf19975.201ENSMALG00000022209YTHDF19975.806Monopterus_albus
ENSORLG00015006302ythdf19570.377MGP_CAROLIEiJ_G0024790Ythdf19670.415Mus_caroli
ENSORLG00015006302ythdf19570.377ENSMUSG00000038848Ythdf19670.415Mus_musculus
ENSORLG00015006302ythdf19570.377MGP_PahariEiJ_G0026237Ythdf19670.415Mus_pahari
ENSORLG00015006302ythdf19570.377MGP_SPRETEiJ_G0025715Ythdf19670.415Mus_spretus
ENSORLG00015006302ythdf18666.856ENSMPUG00000008111YTHDF19669.157Mustela_putorius_furo
ENSORLG00015006302ythdf19271.480ENSMLUG00000002241YTHDF19370.916Myotis_lucifugus
ENSORLG00015006302ythdf19570.205ENSNGAG00000000334Ythdf19670.934Nannospalax_galili
ENSORLG00015006302ythdf19577.104ENSNBRG00000015321YTHDF19777.909Neolamprologus_brichardi
ENSORLG00015006302ythdf19588.547ENSNBRG00000008213ythdf19689.231Neolamprologus_brichardi
ENSORLG00015006302ythdf19265.233ENSOPRG00000001758-9865.045Ochotona_princeps
ENSORLG00015006302ythdf19557.931ENSODEG00000000074-9559.170Octodon_degus
ENSORLG00015006302ythdf19866.288ENSODEG00000004380-9670.069Octodon_degus
ENSORLG00015006302ythdf19587.650ENSONIG00000016799ythdf19990.071Oreochromis_niloticus
ENSORLG00015006302ythdf19572.260ENSOANG00000003723YTHDF19671.626Ornithorhynchus_anatinus
ENSORLG00015006302ythdf19973.934ENSORLG00000009739YTHDF19975.645Oryzias_latipes
ENSORLG00015006302ythdf110099.180ENSORLG00000014665YTHDF110099.180Oryzias_latipes
ENSORLG00015006302ythdf110099.836ENSORLG00020000307ythdf110099.836Oryzias_latipes_hni
ENSORLG00015006302ythdf19975.080ENSORLG00020001332YTHDF19975.606Oryzias_latipes_hni
ENSORLG00015006302ythdf19974.277ENSOMEG00000011843YTHDF19975.968Oryzias_melastigma
ENSORLG00015006302ythdf110097.537ENSOMEG00000002941YTHDF110097.537Oryzias_melastigma
ENSORLG00015006302ythdf19568.900ENSOGAG00000000480YTHDF19670.069Otolemur_garnettii
ENSORLG00015006302ythdf19366.434ENSOARG00000011639YTHDF19467.193Ovis_aries
ENSORLG00015006302ythdf19570.890ENSPPAG00000023277YTHDF19670.351Pan_paniscus
ENSORLG00015006302ythdf17779.372ENSPTIG00000017355YTHDF19666.608Panthera_tigris_altaica
ENSORLG00015006302ythdf19570.890ENSPTRG00000013730YTHDF19670.415Pan_troglodytes
ENSORLG00015006302ythdf19570.377ENSPANG00000021472YTHDF19670.761Papio_anubis
ENSORLG00015006302ythdf19771.812ENSPKIG00000005026YTHDF19671.698Paramormyrops_kingsleyae
ENSORLG00015006302ythdf19572.089ENSPSIG00000005529YTHDF19571.579Pelodiscus_sinensis
ENSORLG00015006302ythdf19178.421ENSPMGG00000009101YTHDF19678.735Periophthalmus_magnuspinnatus
ENSORLG00015006302ythdf19285.968ENSPMGG00000015328ythdf19686.323Periophthalmus_magnuspinnatus
ENSORLG00015006302ythdf19372.105ENSPEMG00000020199Ythdf19671.532Peromyscus_maniculatus_bairdii
ENSORLG00015006302ythdf19772.542ENSPCIG00000017170YTHDF19672.222Phascolarctos_cinereus
ENSORLG00015006302ythdf110087.070ENSPFOG00000005405ythdf110088.216Poecilia_formosa
ENSORLG00015006302ythdf19974.092ENSPLAG00000006298YTHDF19976.282Poecilia_latipinna
ENSORLG00015006302ythdf110087.070ENSPLAG00000006653ythdf110088.216Poecilia_latipinna
ENSORLG00015006302ythdf110086.438ENSPMEG00000023753ythdf110088.235Poecilia_mexicana
ENSORLG00015006302ythdf19974.092ENSPMEG00000020969-9976.282Poecilia_mexicana
ENSORLG00015006302ythdf110087.561ENSPREG00000002173ythdf110088.707Poecilia_reticulata
ENSORLG00015006302ythdf19674.388ENSPREG00000017662YTHDF19876.656Poecilia_reticulata
ENSORLG00015006302ythdf17990.659ENSPPYG00000011226YTHDF19691.011Pongo_abelii
ENSORLG00015006302ythdf18768.302ENSPCAG00000002452YTHDF19868.182Procavia_capensis
ENSORLG00015006302ythdf19570.103ENSPCOG00000025969YTHDF19670.069Propithecus_coquereli
ENSORLG00015006302ythdf19664.966ENSPVAG00000017568YTHDF19765.799Pteropus_vampyrus
ENSORLG00015006302ythdf19976.565ENSPNYG00000002266YTHDF19977.331Pundamilia_nyererei
ENSORLG00015006302ythdf19989.525ENSPNYG00000014007ythdf19888.997Pundamilia_nyererei
ENSORLG00015006302ythdf19980.325ENSPNAG00000012447ythdf19981.626Pygocentrus_nattereri
ENSORLG00015006302ythdf19570.205ENSRNOG00000027015Ythdf19670.242Rattus_norvegicus
ENSORLG00015006302ythdf19569.863ENSRBIG00000044959YTHDF19670.069Rhinopithecus_bieti
ENSORLG00015006302ythdf19569.863ENSRROG00000033014YTHDF19670.242Rhinopithecus_roxellana
ENSORLG00015006302ythdf19270.160ENSSBOG00000027278YTHDF19669.598Saimiri_boliviensis_boliviensis
ENSORLG00015006302ythdf19472.203ENSSHAG00000010430YTHDF18572.183Sarcophilus_harrisii
ENSORLG00015006302ythdf19973.616ENSSFOG00015000284ythdf19975.327Scleropages_formosus
ENSORLG00015006302ythdf19381.433ENSSMAG00000007635YTHDF19876.230Scophthalmus_maximus
ENSORLG00015006302ythdf16994.904ENSSMAG00000013715ythdf19389.098Scophthalmus_maximus
ENSORLG00015006302ythdf110089.015ENSSDUG00000000435ythdf110090.307Seriola_dumerili
ENSORLG00015006302ythdf19973.137ENSSDUG00000015823YTHDF19974.103Seriola_dumerili
ENSORLG00015006302ythdf19989.141ENSSLDG00000024948ythdf19990.276Seriola_lalandi_dorsalis
ENSORLG00015006302ythdf17894.972ENSSLDG00000001054YTHDF19195.480Seriola_lalandi_dorsalis
ENSORLG00015006302ythdf18671.402ENSSPUG00000015143YTHDF19671.648Sphenodon_punctatus
ENSORLG00015006302ythdf110088.640ENSSPAG00000014989ythdf110089.440Stegastes_partitus
ENSORLG00015006302ythdf19974.444ENSSPAG00000003666YTHDF19975.680Stegastes_partitus
ENSORLG00015006302ythdf19471.875ENSTGUG00000007565YTHDF19671.404Taeniopygia_guttata
ENSORLG00015006302ythdf19587.863ENSTRUG00000004288ythdf19786.838Takifugu_rubripes
ENSORLG00015006302ythdf19574.129ENSTRUG00000005049YTHDF19775.966Takifugu_rubripes
ENSORLG00015006302ythdf19579.346ENSTNIG00000012490ythdf19679.690Tetraodon_nigroviridis
ENSORLG00015006302ythdf19573.793ENSTNIG00000003975YTHDF19673.137Tetraodon_nigroviridis
ENSORLG00015006302ythdf19767.905ENSTTRG00000001804YTHDF19767.820Tursiops_truncatus
ENSORLG00015006302ythdf19170.515ENSUAMG00000011021YTHDF19671.073Ursus_americanus
ENSORLG00015006302ythdf18669.508ENSUMAG00000022290YTHDF19670.881Ursus_maritimus
ENSORLG00015006302ythdf18669.697ENSVVUG00000015275YTHDF19670.307Vulpes_vulpes
ENSORLG00015006302ythdf19372.049ENSXETG00000027086ythdf19471.708Xenopus_tropicalis
ENSORLG00015006302ythdf19485.615ENSXCOG00000002490ythdf19385.487Xiphophorus_couchianus
ENSORLG00015006302ythdf19673.573ENSXCOG00000008115YTHDF19976.325Xiphophorus_couchianus
ENSORLG00015006302ythdf19973.659ENSXMAG00000015644YTHDF19976.320Xiphophorus_maculatus
ENSORLG00015006302ythdf110087.725ENSXMAG00000008525ythdf110088.380Xiphophorus_maculatus

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