EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015006406 (Gene tree)
Gene ID: -
Gene Symbol: xrcc6
Alias: -
Full Name: X-ray repair complementing defective repair in Chinese hamster cells 6
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6844 bases
Position: chr19:2060247-2067090
Accession: ZDB-GENE-030131-6420
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015005621	SAP	PF02037.27	6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015005626	-	3063	-	ENSORLP00015005621	611 (aa)	-	-

Gene Model

Click here to download ENSORLG00015006406's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006406's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006406	xrcc6	99	55.246	ENSG00000196419	XRCC6	99	54.976	Homo_sapiens
ENSORLG00015006406	xrcc6	99	84.098	ENSAPOG00000012704	xrcc6	100	84.098	Acanthochromis_polyacanthus
ENSORLG00015006406	xrcc6	100	84.615	ENSACIG00000021277	xrcc6	100	84.615	Amphilophus_citrinellus
ENSORLG00015006406	xrcc6	100	84.615	ENSAOCG00000021344	xrcc6	100	84.615	Amphiprion_ocellaris
ENSORLG00015006406	xrcc6	100	84.615	ENSAPEG00000020712	xrcc6	100	84.615	Amphiprion_percula
ENSORLG00015006406	xrcc6	100	83.470	ENSATEG00000007119	xrcc6	100	83.470	Anabas_testudineus
ENSORLG00015006406	xrcc6	89	60.695	ENSAPLG00000004469	XRCC6	98	60.695	Anas_platyrhynchos
ENSORLG00015006406	xrcc6	99	55.082	ENSANAG00000018684	XRCC6	98	55.861	Aotus_nancymaae
ENSORLG00015006406	xrcc6	99	47.869	ENSANAG00000020017	-	99	47.869	Aotus_nancymaae
ENSORLG00015006406	xrcc6	99	48.287	ENSANAG00000035230	-	99	47.961	Aotus_nancymaae
ENSORLG00015006406	xrcc6	99	46.353	ENSANAG00000023445	-	99	45.894	Aotus_nancymaae
ENSORLG00015006406	xrcc6	100	84.615	ENSACLG00000018608	xrcc6	100	84.615	Astatotilapia_calliptera
ENSORLG00015006406	xrcc6	99	76.683	ENSAMXG00000007545	xrcc6	99	76.683	Astyanax_mexicanus
ENSORLG00015006406	xrcc6	99	55.082	ENSCJAG00000045512	XRCC6	99	54.649	Callithrix_jacchus
ENSORLG00015006406	xrcc6	99	53.834	ENSTSYG00000011348	XRCC6	99	53.997	Carlito_syrichta
ENSORLG00015006406	xrcc6	99	46.154	ENSCCAG00000037663	-	97	46.154	Cebus_capucinus
ENSORLG00015006406	xrcc6	93	53.543	ENSCCAG00000030468	-	99	53.543	Cebus_capucinus
ENSORLG00015006406	xrcc6	99	51.713	ENSCCAG00000030041	-	95	51.387	Cebus_capucinus
ENSORLG00015006406	xrcc6	99	44.408	ENSCCAG00000035711	-	99	44.408	Cebus_capucinus
ENSORLG00015006406	xrcc6	99	55.246	ENSCATG00000042366	XRCC6	99	54.976	Cercocebus_atys
ENSORLG00015006406	xrcc6	99	55.556	ENSCLAG00000016669	XRCC6	99	55.556	Chinchilla_lanigera
ENSORLG00015006406	xrcc6	99	55.246	ENSCSAG00000005784	XRCC6	99	54.976	Chlorocebus_sabaeus
ENSORLG00015006406	xrcc6	99	59.442	ENSCPBG00000020535	XRCC6	99	59.606	Chrysemys_picta_bellii
ENSORLG00015006406	xrcc6	98	35.216	ENSCING00000000633	-	95	35.334	Ciona_intestinalis
ENSORLG00015006406	xrcc6	99	55.246	ENSCANG00000031032	XRCC6	99	54.976	Colobus_angolensis_palliatus
ENSORLG00015006406	xrcc6	99	51.480	ENSCGRG00001019029	Xrcc6	99	51.480	Cricetulus_griseus_chok1gshd
ENSORLG00015006406	xrcc6	99	55.921	ENSCGRG00000001528	Xrcc6	99	55.921	Cricetulus_griseus_crigri
ENSORLG00015006406	xrcc6	100	79.051	ENSCSEG00000020434	xrcc6	100	79.051	Cynoglossus_semilaevis
ENSORLG00015006406	xrcc6	100	82.979	ENSCVAG00000002189	xrcc6	100	82.979	Cyprinodon_variegatus
ENSORLG00015006406	xrcc6	99	74.877	ENSDARG00000071551	xrcc6	99	75.205	Danio_rerio
ENSORLG00015006406	xrcc6	78	52.670	ENSETEG00000015333	-	77	52.670	Echinops_telfairi
ENSORLG00015006406	xrcc6	99	53.758	ENSEASG00005001514	XRCC6	99	54.248	Equus_asinus_asinus
ENSORLG00015006406	xrcc6	99	53.922	ENSECAG00000017563	XRCC6	99	54.064	Equus_caballus
ENSORLG00015006406	xrcc6	100	75.450	ENSELUG00000020301	xrcc6	100	75.450	Esox_lucius
ENSORLG00015006406	xrcc6	99	58.958	ENSFALG00000011908	XRCC6	96	59.121	Ficedula_albicollis
ENSORLG00015006406	xrcc6	100	84.288	ENSFHEG00000016833	xrcc6	100	84.288	Fundulus_heteroclitus
ENSORLG00015006406	xrcc6	99	68.293	ENSGMOG00000013524	xrcc6	100	68.293	Gadus_morhua
ENSORLG00015006406	xrcc6	99	58.795	ENSGALG00000011932	XRCC6	99	58.958	Gallus_gallus
ENSORLG00015006406	xrcc6	100	80.851	ENSGAFG00000008130	xrcc6	100	81.178	Gambusia_affinis
ENSORLG00015006406	xrcc6	99	82.248	ENSGACG00000004868	xrcc6	99	82.248	Gasterosteus_aculeatus
ENSORLG00015006406	xrcc6	99	59.278	ENSGAGG00000017518	XRCC6	99	59.442	Gopherus_agassizii
ENSORLG00015006406	xrcc6	99	55.246	ENSGGOG00000015885	XRCC6	99	54.976	Gorilla_gorilla
ENSORLG00015006406	xrcc6	93	84.656	ENSHBUG00000023281	xrcc6	100	84.656	Haplochromis_burtoni
ENSORLG00015006406	xrcc6	99	54.501	ENSHGLG00000018078	XRCC6	99	54.337	Heterocephalus_glaber_female
ENSORLG00015006406	xrcc6	99	54.501	ENSHGLG00100011264	XRCC6	99	54.337	Heterocephalus_glaber_male
ENSORLG00015006406	xrcc6	100	76.268	ENSHCOG00000009821	xrcc6	100	76.268	Hippocampus_comes
ENSORLG00015006406	xrcc6	99	76.683	ENSIPUG00000000767	xrcc6	99	76.683	Ictalurus_punctatus
ENSORLG00015006406	xrcc6	99	54.412	ENSSTOG00000009490	XRCC6	99	54.575	Ictidomys_tridecemlineatus
ENSORLG00015006406	xrcc6	99	51.645	ENSJJAG00000017136	Xrcc6	99	52.138	Jaculus_jaculus
ENSORLG00015006406	xrcc6	99	84.426	ENSKMAG00000002141	xrcc6	99	84.426	Kryptolebias_marmoratus
ENSORLG00015006406	xrcc6	99	82.430	ENSLBEG00000002691	xrcc6	99	82.430	Labrus_bergylta
ENSORLG00015006406	xrcc6	83	71.287	ENSLOCG00000011533	xrcc6	99	71.287	Lepisosteus_oculatus
ENSORLG00015006406	xrcc6	99	55.246	ENSMFAG00000003352	XRCC6	99	54.976	Macaca_fascicularis
ENSORLG00015006406	xrcc6	99	55.246	ENSMMUG00000001856	XRCC6	99	54.976	Macaca_mulatta
ENSORLG00015006406	xrcc6	99	55.246	ENSMNEG00000035076	XRCC6	99	54.976	Macaca_nemestrina
ENSORLG00015006406	xrcc6	99	55.246	ENSMLEG00000019869	XRCC6	99	54.976	Mandrillus_leucophaeus
ENSORLG00015006406	xrcc6	96	80.920	ENSMAMG00000003405	xrcc6	97	80.920	Mastacembelus_armatus
ENSORLG00015006406	xrcc6	100	81.015	ENSMAMG00000003368	xrcc6	100	81.015	Mastacembelus_armatus
ENSORLG00015006406	xrcc6	100	84.452	ENSMZEG00005028080	xrcc6	100	84.452	Maylandia_zebra
ENSORLG00015006406	xrcc6	99	58.632	ENSMGAG00000012146	XRCC6	99	58.632	Meleagris_gallopavo
ENSORLG00015006406	xrcc6	99	56.414	ENSMAUG00000017340	Xrcc6	99	56.414	Mesocricetus_auratus
ENSORLG00015006406	xrcc6	99	56.908	ENSMOCG00000015717	Xrcc6	99	56.908	Microtus_ochrogaster
ENSORLG00015006406	xrcc6	100	80.851	ENSMMOG00000003536	xrcc6	99	80.851	Mola_mola
ENSORLG00015006406	xrcc6	100	83.633	ENSMALG00000013912	xrcc6	95	83.633	Monopterus_albus
ENSORLG00015006406	xrcc6	99	53.682	MGP_CAROLIEiJ_G0020067	Xrcc6	99	53.682	Mus_caroli
ENSORLG00015006406	xrcc6	99	56.956	ENSMUSG00000022471	Xrcc6	99	57.576	Mus_musculus
ENSORLG00015006406	xrcc6	99	57.353	MGP_PahariEiJ_G0020069	Xrcc6	99	56.956	Mus_pahari
ENSORLG00015006406	xrcc6	96	57.265	MGP_SPRETEiJ_G0020967	Xrcc6	99	57.265	Mus_spretus
ENSORLG00015006406	xrcc6	99	54.770	ENSNGAG00000013750	Xrcc6	99	54.770	Nannospalax_galili
ENSORLG00015006406	xrcc6	100	84.943	ENSNBRG00000004125	xrcc6	100	84.943	Neolamprologus_brichardi
ENSORLG00015006406	xrcc6	95	57.045	ENSOPRG00000002386	XRCC6	99	57.045	Ochotona_princeps
ENSORLG00015006406	xrcc6	99	54.248	ENSODEG00000015847	XRCC6	99	54.575	Octodon_degus
ENSORLG00015006406	xrcc6	100	84.452	ENSONIG00000019715	xrcc6	100	84.452	Oreochromis_niloticus
ENSORLG00015006406	xrcc6	67	59.709	ENSOANG00000011328	XRCC6	98	59.709	Ornithorhynchus_anatinus
ENSORLG00015006406	xrcc6	99	56.158	ENSOCUG00000006948	XRCC6	99	56.158	Oryctolagus_cuniculus
ENSORLG00015006406	xrcc6	100	98.854	ENSORLG00020007820	xrcc6	100	98.854	Oryzias_latipes_hni
ENSORLG00015006406	xrcc6	100	93.944	ENSOMEG00000008998	xrcc6	100	93.944	Oryzias_melastigma
ENSORLG00015006406	xrcc6	99	54.739	ENSOGAG00000008821	XRCC6	99	54.902	Otolemur_garnettii
ENSORLG00015006406	xrcc6	92	55.014	ENSPPAG00000037167	XRCC6	99	55.014	Pan_paniscus
ENSORLG00015006406	xrcc6	99	55.246	ENSPTRG00000022548	XRCC6	99	56.089	Pan_troglodytes
ENSORLG00015006406	xrcc6	99	55.246	ENSPTRG00000045824	XRCC6	99	56.089	Pan_troglodytes
ENSORLG00015006406	xrcc6	99	55.082	ENSPANG00000001252	XRCC6	99	56.223	Papio_anubis
ENSORLG00015006406	xrcc6	99	72.906	ENSPKIG00000003974	xrcc6	99	72.906	Paramormyrops_kingsleyae
ENSORLG00015006406	xrcc6	99	78.109	ENSPMGG00000014220	xrcc6	100	78.275	Periophthalmus_magnuspinnatus
ENSORLG00015006406	xrcc6	99	55.428	ENSPEMG00000023446	Xrcc6	99	55.428	Peromyscus_maniculatus_bairdii
ENSORLG00015006406	xrcc6	99	57.072	ENSPCIG00000026409	XRCC6	99	57.072	Phascolarctos_cinereus
ENSORLG00015006406	xrcc6	100	83.797	ENSPFOG00000017173	xrcc6	100	83.797	Poecilia_formosa
ENSORLG00015006406	xrcc6	100	83.470	ENSPLAG00000000562	xrcc6	100	83.470	Poecilia_latipinna
ENSORLG00015006406	xrcc6	100	83.961	ENSPMEG00000018478	xrcc6	100	83.961	Poecilia_mexicana
ENSORLG00015006406	xrcc6	100	82.843	ENSPREG00000020957	xrcc6	93	82.843	Poecilia_reticulata
ENSORLG00015006406	xrcc6	99	49.755	ENSPPYG00000011876	XRCC6	99	50.000	Pongo_abelii
ENSORLG00015006406	xrcc6	99	53.682	ENSPVAG00000001168	XRCC6	99	53.519	Pteropus_vampyrus
ENSORLG00015006406	xrcc6	100	84.452	ENSPNYG00000003815	xrcc6	100	80.374	Pundamilia_nyererei
ENSORLG00015006406	xrcc6	99	56.301	ENSRNOG00000006392	Xrcc6	99	56.301	Rattus_norvegicus
ENSORLG00015006406	xrcc6	99	51.148	ENSRBIG00000039794	XRCC6	98	52.324	Rhinopithecus_bieti
ENSORLG00015006406	xrcc6	99	55.246	ENSRROG00000030297	XRCC6	99	54.976	Rhinopithecus_roxellana
ENSORLG00015006406	xrcc6	67	49.512	ENSSBOG00000024724	-	99	49.877	Saimiri_boliviensis_boliviensis
ENSORLG00015006406	xrcc6	99	56.117	ENSSHAG00000010790	XRCC6	99	56.117	Sarcophilus_harrisii
ENSORLG00015006406	xrcc6	99	74.384	ENSSFOG00015014409	xrcc6	99	74.384	Scleropages_formosus
ENSORLG00015006406	xrcc6	100	84.615	ENSSMAG00000006496	xrcc6	100	84.615	Scophthalmus_maximus
ENSORLG00015006406	xrcc6	100	83.470	ENSSDUG00000007542	xrcc6	100	83.470	Seriola_dumerili
ENSORLG00015006406	xrcc6	100	82.979	ENSSLDG00000009974	xrcc6	100	82.979	Seriola_lalandi_dorsalis
ENSORLG00015006406	xrcc6	99	58.564	ENSSPUG00000012086	XRCC6	99	58.728	Sphenodon_punctatus
ENSORLG00015006406	xrcc6	100	85.270	ENSSPAG00000015199	xrcc6	100	85.270	Stegastes_partitus
ENSORLG00015006406	xrcc6	95	60.445	ENSTGUG00000009852	-	94	60.445	Taeniopygia_guttata
ENSORLG00015006406	xrcc6	99	77.213	ENSTRUG00000017070	xrcc6	99	77.213	Takifugu_rubripes
ENSORLG00015006406	xrcc6	96	76.182	ENSTNIG00000012947	xrcc6	99	76.182	Tetraodon_nigroviridis
ENSORLG00015006406	xrcc6	96	51.624	ENSTBEG00000011736	XRCC6	99	51.624	Tupaia_belangeri
ENSORLG00015006406	xrcc6	99	46.732	ENSTTRG00000006749	XRCC6	99	47.712	Tursiops_truncatus
ENSORLG00015006406	xrcc6	100	82.815	ENSXMAG00000009691	xrcc6	100	82.815	Xiphophorus_maculatus