EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015006547 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 32280 bases
Position: chr1:26609162-26641441
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015005753	TRM	PF02005.16	1.4e-139	1	1
ENSORLP00015025438	TRM	PF02005.16	1.6e-139	1	1
ENSORLP00015005745	TRM	PF02005.16	3.3e-131	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015005379	-	3914	-	ENSORLP00015025438	680 (aa)	-	-
ENSORLT00015005398	-	4203	-	ENSORLP00015005753	654 (aa)	-	-
ENSORLT00015005424	-	1887	-	ENSORLP00015005745	628 (aa)	-	-

Gene Model

Click here to download ENSORLG00015006547's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006547	trmt1	86	66.025	ENSG00000104907	TRMT1	100	72.251	Homo_sapiens
ENSORLG00015006547	trmt1	88	64.948	ENSAMEG00000012598	TRMT1	87	65.120	Ailuropoda_melanoleuca
ENSORLG00015006547	trmt1	95	76.911	ENSACIG00000018680	trmt1	99	76.911	Amphilophus_citrinellus
ENSORLG00015006547	trmt1	99	81.288	ENSAOCG00000006781	trmt1	98	81.288	Amphiprion_ocellaris
ENSORLG00015006547	trmt1	99	81.442	ENSAPEG00000007712	trmt1	98	81.442	Amphiprion_percula
ENSORLG00015006547	trmt1	99	80.514	ENSATEG00000001872	trmt1	99	80.514	Anabas_testudineus
ENSORLG00015006547	trmt1	91	65.397	ENSACAG00000003825	TRMT1	97	65.397	Anolis_carolinensis
ENSORLG00015006547	trmt1	86	64.983	ENSANAG00000023016	TRMT1	92	64.983	Aotus_nancymaae
ENSORLG00015006547	trmt1	96	80.125	ENSACLG00000010073	trmt1	99	81.848	Astatotilapia_calliptera
ENSORLG00015006547	trmt1	91	75.702	ENSAMXG00000012026	trmt1	91	75.702	Astyanax_mexicanus
ENSORLG00015006547	trmt1	87	64.706	ENSBTAG00000019325	TRMT1	82	64.706	Bos_taurus
ENSORLG00015006547	trmt1	78	40.344	WBGene00006613	trm-1	93	40.344	Caenorhabditis_elegans
ENSORLG00015006547	trmt1	86	63.700	ENSCJAG00000004566	TRMT1	88	63.700	Callithrix_jacchus
ENSORLG00015006547	trmt1	88	65.292	ENSCAFG00000017070	TRMT1	91	65.292	Canis_familiaris
ENSORLG00015006547	trmt1	90	63.366	ENSCAFG00020005397	TRMT1	94	63.366	Canis_lupus_dingo
ENSORLG00015006547	trmt1	87	65.112	ENSCHIG00000013569	TRMT1	87	65.112	Capra_hircus
ENSORLG00015006547	trmt1	86	63.874	ENSTSYG00000003207	TRMT1	87	63.811	Carlito_syrichta
ENSORLG00015006547	trmt1	81	61.205	ENSCAPG00000003355	TRMT1	94	61.205	Cavia_aperea
ENSORLG00015006547	trmt1	86	65.096	ENSCPOG00000011754	TRMT1	87	65.096	Cavia_porcellus
ENSORLG00015006547	trmt1	86	63.573	ENSCCAG00000022263	TRMT1	92	63.573	Cebus_capucinus
ENSORLG00015006547	trmt1	86	65.849	ENSCATG00000039850	TRMT1	86	65.849	Cercocebus_atys
ENSORLG00015006547	trmt1	76	54.348	ENSCATG00000038220	-	90	54.348	Cercocebus_atys
ENSORLG00015006547	trmt1	86	66.200	ENSCLAG00000015295	TRMT1	89	63.684	Chinchilla_lanigera
ENSORLG00015006547	trmt1	72	68.354	ENSCSAG00000006500	TRMT1	89	68.354	Chlorocebus_sabaeus
ENSORLG00015006547	trmt1	92	66.833	ENSCPBG00000023866	TRMT1	90	67.053	Chrysemys_picta_bellii
ENSORLG00015006547	trmt1	84	47.535	ENSCING00000002884	-	99	47.535	Ciona_intestinalis
ENSORLG00015006547	trmt1	82	50.645	ENSCSAVG00000010927	-	100	49.449	Ciona_savignyi
ENSORLG00015006547	trmt1	91	48.922	ENSCANG00000031650	-	94	48.922	Colobus_angolensis_palliatus
ENSORLG00015006547	trmt1	86	52.448	ENSCANG00000040631	TRMT1	86	52.448	Colobus_angolensis_palliatus
ENSORLG00015006547	trmt1	86	65.378	ENSCGRG00001022594	Trmt1	87	65.378	Cricetulus_griseus_chok1gshd
ENSORLG00015006547	trmt1	86	65.378	ENSCGRG00000017732	Trmt1	86	65.378	Cricetulus_griseus_crigri
ENSORLG00015006547	trmt1	99	76.269	ENSCSEG00000001643	trmt1	100	76.269	Cynoglossus_semilaevis
ENSORLG00015006547	trmt1	99	79.380	ENSCVAG00000011886	trmt1	98	79.380	Cyprinodon_variegatus
ENSORLG00015006547	trmt1	91	75.748	ENSDARG00000010978	trmt1	90	75.748	Danio_rerio
ENSORLG00015006547	trmt1	78	43.726	ENSDNOG00000048240	-	89	43.726	Dasypus_novemcinctus
ENSORLG00015006547	trmt1	86	64.098	ENSDORG00000014298	Trmt1	86	64.098	Dipodomys_ordii
ENSORLG00015006547	trmt1	84	47.857	FBgn0032430	CG6388	95	47.857	Drosophila_melanogaster
ENSORLG00015006547	trmt1	50	64.103	ENSETEG00000015483	-	50	64.103	Echinops_telfairi
ENSORLG00015006547	trmt1	81	50.188	ENSEBUG00000003449	trmt1	78	51.277	Eptatretus_burgeri
ENSORLG00015006547	trmt1	86	64.634	ENSEASG00005004050	TRMT1	90	64.634	Equus_asinus_asinus
ENSORLG00015006547	trmt1	86	64.634	ENSECAG00000016149	TRMT1	90	64.634	Equus_caballus
ENSORLG00015006547	trmt1	60	56.203	ENSEEUG00000014102	-	100	56.203	Erinaceus_europaeus
ENSORLG00015006547	trmt1	88	77.835	ENSELUG00000021659	trmt1	87	77.835	Esox_lucius
ENSORLG00015006547	trmt1	86	65.043	ENSFCAG00000000483	TRMT1	87	65.217	Felis_catus
ENSORLG00015006547	trmt1	89	63.744	ENSFDAG00000007386	TRMT1	89	63.744	Fukomys_damarensis
ENSORLG00015006547	trmt1	89	79.862	ENSFHEG00000012865	trmt1	97	79.862	Fundulus_heteroclitus
ENSORLG00015006547	trmt1	87	72.935	ENSGMOG00000006564	trmt1	99	72.935	Gadus_morhua
ENSORLG00015006547	trmt1	95	81.511	ENSGAFG00000011862	trmt1	96	81.511	Gambusia_affinis
ENSORLG00015006547	trmt1	87	81.404	ENSGACG00000000227	trmt1	93	81.930	Gasterosteus_aculeatus
ENSORLG00015006547	trmt1	86	70.671	ENSGAGG00000016432	TRMT1	85	70.671	Gopherus_agassizii
ENSORLG00015006547	trmt1	86	66.200	ENSGGOG00000014007	TRMT1	87	66.200	Gorilla_gorilla
ENSORLG00015006547	trmt1	84	76.138	ENSHBUG00000008821	trmt1	92	76.138	Haplochromis_burtoni
ENSORLG00015006547	trmt1	89	63.636	ENSHGLG00000015972	TRMT1	90	63.636	Heterocephalus_glaber_female
ENSORLG00015006547	trmt1	89	59.664	ENSHGLG00100018112	TRMT1	90	59.664	Heterocephalus_glaber_male
ENSORLG00015006547	trmt1	100	73.282	ENSHCOG00000009447	trmt1	100	73.282	Hippocampus_comes
ENSORLG00015006547	trmt1	93	70.203	ENSIPUG00000002899	trmt1	94	70.671	Ictalurus_punctatus
ENSORLG00015006547	trmt1	86	65.096	ENSSTOG00000012531	TRMT1	88	65.096	Ictidomys_tridecemlineatus
ENSORLG00015006547	trmt1	86	66.261	ENSJJAG00000017154	Trmt1	88	66.261	Jaculus_jaculus
ENSORLG00015006547	trmt1	99	80.894	ENSKMAG00000011809	trmt1	99	82.799	Kryptolebias_marmoratus
ENSORLG00015006547	trmt1	94	81.190	ENSLBEG00000012703	trmt1	100	77.794	Labrus_bergylta
ENSORLG00015006547	trmt1	87	60.035	ENSLACG00000014585	TRMT1	94	60.035	Latimeria_chalumnae
ENSORLG00015006547	trmt1	87	68.651	ENSLOCG00000006479	trmt1	99	68.651	Lepisosteus_oculatus
ENSORLG00015006547	trmt1	86	65.679	ENSLAFG00000014072	TRMT1	88	65.679	Loxodonta_africana
ENSORLG00015006547	trmt1	86	65.849	ENSMFAG00000033143	TRMT1	86	65.849	Macaca_fascicularis
ENSORLG00015006547	trmt1	86	62.324	ENSMMUG00000001167	TRMT1	83	67.535	Macaca_mulatta
ENSORLG00015006547	trmt1	86	65.674	ENSMNEG00000037867	TRMT1	86	65.674	Macaca_nemestrina
ENSORLG00015006547	trmt1	86	65.499	ENSMLEG00000016142	TRMT1	87	65.499	Mandrillus_leucophaeus
ENSORLG00015006547	trmt1	99	79.116	ENSMAMG00000004357	trmt1	99	79.116	Mastacembelus_armatus
ENSORLG00015006547	trmt1	96	81.329	ENSMZEG00005014510	trmt1	95	81.329	Maylandia_zebra
ENSORLG00015006547	trmt1	90	62.957	ENSMAUG00000011134	Trmt1	91	62.957	Mesocricetus_auratus
ENSORLG00015006547	trmt1	86	66.667	ENSMICG00000000793	TRMT1	86	66.667	Microcebus_murinus
ENSORLG00015006547	trmt1	86	65.614	ENSMOCG00000015895	Trmt1	86	65.614	Microtus_ochrogaster
ENSORLG00015006547	trmt1	94	78.896	ENSMMOG00000011097	trmt1	100	78.896	Mola_mola
ENSORLG00015006547	trmt1	93	63.533	ENSMODG00000011619	TRMT1	98	63.533	Monodelphis_domestica
ENSORLG00015006547	trmt1	86	66.549	MGP_CAROLIEiJ_G0031304	Trmt1	86	66.549	Mus_caroli
ENSORLG00015006547	trmt1	86	66.725	ENSMUSG00000001909	Trmt1	86	66.725	Mus_musculus
ENSORLG00015006547	trmt1	86	66.549	MGP_SPRETEiJ_G0032422	Trmt1	86	66.549	Mus_spretus
ENSORLG00015006547	trmt1	86	66.550	ENSMPUG00000004210	TRMT1	82	66.550	Mustela_putorius_furo
ENSORLG00015006547	trmt1	87	66.319	ENSMLUG00000012809	TRMT1	86	66.319	Myotis_lucifugus
ENSORLG00015006547	trmt1	87	64.931	ENSNGAG00000022486	Trmt1	87	64.931	Nannospalax_galili
ENSORLG00015006547	trmt1	76	89.706	ENSNBRG00000024376	trmt1	87	89.706	Neolamprologus_brichardi
ENSORLG00015006547	trmt1	68	65.385	ENSNLEG00000013019	-	81	65.385	Nomascus_leucogenys
ENSORLG00015006547	trmt1	87	65.913	ENSMEUG00000013756	TRMT1	97	65.913	Notamacropus_eugenii
ENSORLG00015006547	trmt1	69	76.000	ENSOPRG00000009471	-	71	76.000	Ochotona_princeps
ENSORLG00015006547	trmt1	86	66.375	ENSODEG00000010323	TRMT1	87	66.375	Octodon_degus
ENSORLG00015006547	trmt1	96	84.335	ENSONIG00000000400	trmt1	97	85.270	Oreochromis_niloticus
ENSORLG00015006547	trmt1	81	64.045	ENSOCUG00000021934	TRMT1	99	64.179	Oryctolagus_cuniculus
ENSORLG00015006547	trmt1	100	94.856	ENSORLG00000020074	trmt1	100	94.856	Oryzias_latipes
ENSORLG00015006547	trmt1	100	99.083	ENSORLG00020007561	trmt1	100	99.083	Oryzias_latipes_hni
ENSORLG00015006547	trmt1	100	92.508	ENSOMEG00000019343	trmt1	100	92.508	Oryzias_melastigma
ENSORLG00015006547	trmt1	86	65.445	ENSOGAG00000025576	TRMT1	90	65.794	Otolemur_garnettii
ENSORLG00015006547	trmt1	87	53.012	ENSOARG00000009397	TRMT1	81	53.528	Ovis_aries
ENSORLG00015006547	trmt1	83	57.439	ENSPPRG00000012117	TRMT1	87	58.421	Panthera_pardus
ENSORLG00015006547	trmt1	65	64.138	ENSPTIG00000008833	TRMT1	82	65.035	Panthera_tigris_altaica
ENSORLG00015006547	trmt1	86	66.200	ENSPTRG00000010557	TRMT1	87	66.200	Pan_troglodytes
ENSORLG00015006547	trmt1	84	47.452	ENSPTRG00000050421	-	90	47.452	Pan_troglodytes
ENSORLG00015006547	trmt1	86	65.849	ENSPANG00000009247	TRMT1	87	65.849	Papio_anubis
ENSORLG00015006547	trmt1	70	54.130	ENSPANG00000034058	-	81	54.130	Papio_anubis
ENSORLG00015006547	trmt1	94	73.246	ENSPKIG00000005309	trmt1	91	73.246	Paramormyrops_kingsleyae
ENSORLG00015006547	trmt1	83	58.394	ENSPSIG00000008762	TRMT1	79	58.394	Pelodiscus_sinensis
ENSORLG00015006547	trmt1	92	79.368	ENSPMGG00000019764	trmt1	94	79.368	Periophthalmus_magnuspinnatus
ENSORLG00015006547	trmt1	86	65.909	ENSPEMG00000016247	Trmt1	86	65.909	Peromyscus_maniculatus_bairdii
ENSORLG00015006547	trmt1	88	63.194	ENSPMAG00000004329	trmt1	91	63.194	Petromyzon_marinus
ENSORLG00015006547	trmt1	91	63.816	ENSPCIG00000019273	TRMT1	93	63.816	Phascolarctos_cinereus
ENSORLG00015006547	trmt1	99	78.374	ENSPFOG00000008527	trmt1	99	78.374	Poecilia_formosa
ENSORLG00015006547	trmt1	99	77.147	ENSPLAG00000018788	trmt1	95	81.560	Poecilia_latipinna
ENSORLG00015006547	trmt1	95	81.099	ENSPMEG00000013120	trmt1	95	81.099	Poecilia_mexicana
ENSORLG00015006547	trmt1	94	80.098	ENSPREG00000000211	trmt1	91	80.098	Poecilia_reticulata
ENSORLG00015006547	trmt1	86	65.849	ENSPPYG00000009622	TRMT1	87	65.849	Pongo_abelii
ENSORLG00015006547	trmt1	89	60.678	ENSPCAG00000003698	TRMT1	90	60.678	Procavia_capensis
ENSORLG00015006547	trmt1	86	66.084	ENSPCOG00000008653	TRMT1	87	66.084	Propithecus_coquereli
ENSORLG00015006547	trmt1	86	65.149	ENSPVAG00000015076	TRMT1	87	65.149	Pteropus_vampyrus
ENSORLG00015006547	trmt1	93	80.693	ENSPNYG00000013960	trmt1	99	80.693	Pundamilia_nyererei
ENSORLG00015006547	trmt1	88	69.402	ENSPNAG00000024859	trmt1	91	69.402	Pygocentrus_nattereri
ENSORLG00015006547	trmt1	86	66.197	ENSRNOG00000002914	Trmt1	89	66.197	Rattus_norvegicus
ENSORLG00015006547	trmt1	86	66.550	ENSRBIG00000038324	TRMT1	86	66.550	Rhinopithecus_bieti
ENSORLG00015006547	trmt1	83	48.468	ENSRBIG00000037505	-	87	49.189	Rhinopithecus_bieti
ENSORLG00015006547	trmt1	86	47.213	ENSRROG00000031847	-	89	47.909	Rhinopithecus_roxellana
ENSORLG00015006547	trmt1	86	66.550	ENSRROG00000028599	TRMT1	86	66.550	Rhinopithecus_roxellana
ENSORLG00015006547	trmt1	77	38.274	YDR120C	-	92	38.274	Saccharomyces_cerevisiae
ENSORLG00015006547	trmt1	86	63.923	ENSSBOG00000028861	TRMT1	92	63.923	Saimiri_boliviensis_boliviensis
ENSORLG00015006547	trmt1	87	67.426	ENSSHAG00000014381	TRMT1	97	65.124	Sarcophilus_harrisii
ENSORLG00015006547	trmt1	89	76.541	ENSSFOG00015004139	trmt1	89	74.503	Scleropages_formosus
ENSORLG00015006547	trmt1	95	80.696	ENSSMAG00000021136	trmt1	100	77.994	Scophthalmus_maximus
ENSORLG00015006547	trmt1	99	80.455	ENSSDUG00000012740	trmt1	99	81.364	Seriola_dumerili
ENSORLG00015006547	trmt1	99	80.455	ENSSLDG00000005971	trmt1	99	81.364	Seriola_lalandi_dorsalis
ENSORLG00015006547	trmt1	78	65.437	ENSSARG00000005138	TRMT1	91	65.437	Sorex_araneus
ENSORLG00015006547	trmt1	86	51.489	ENSSPUG00000001084	TRMT1	89	51.923	Sphenodon_punctatus
ENSORLG00015006547	trmt1	99	78.354	ENSSPAG00000007153	trmt1	99	82.939	Stegastes_partitus
ENSORLG00015006547	trmt1	86	65.499	ENSSSCG00000013744	TRMT1	90	65.499	Sus_scrofa
ENSORLG00015006547	trmt1	97	72.939	ENSTRUG00000010700	trmt1	95	72.939	Takifugu_rubripes
ENSORLG00015006547	trmt1	87	82.837	ENSTNIG00000018808	trmt1	99	82.837	Tetraodon_nigroviridis
ENSORLG00015006547	trmt1	86	62.021	ENSTTRG00000006379	TRMT1	95	58.110	Tursiops_truncatus
ENSORLG00015006547	trmt1	88	65.636	ENSUAMG00000022911	TRMT1	95	63.140	Ursus_americanus
ENSORLG00015006547	trmt1	88	65.292	ENSUMAG00000006027	TRMT1	91	65.292	Ursus_maritimus
ENSORLG00015006547	trmt1	88	65.464	ENSVVUG00000024177	TRMT1	88	65.464	Vulpes_vulpes
ENSORLG00015006547	trmt1	70	69.565	ENSXETG00000033863	TRMT1	92	69.565	Xenopus_tropicalis
ENSORLG00015006547	trmt1	95	81.583	ENSXCOG00000015733	trmt1	95	81.583	Xiphophorus_couchianus
ENSORLG00015006547	trmt1	88	84.991	ENSXMAG00000013823	trmt1	99	84.991	Xiphophorus_maculatus