EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015006613 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 9348 bases
Position: chr17:6322939-6332286
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015005818	RRM_1	PF00076.22	1.8e-29	1	2
ENSORLP00015005818	RRM_1	PF00076.22	1.8e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015005281	-	3172	-	ENSORLP00015005818	488 (aa)	-	-

Gene Model

Click here to download ENSORLG00015006613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015006613	-	77	37.209	ENSORLG00015013815	ncl	89	37.910

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006613	-	77	38.642	ENSAPOG00000023888	ncl	58	38.250	Acanthochromis_polyacanthus
ENSORLG00015006613	-	80	52.605	ENSAPOG00000014534	-	70	52.605	Acanthochromis_polyacanthus
ENSORLG00015006613	-	77	39.737	ENSACIG00000013234	ncl	65	38.945	Amphilophus_citrinellus
ENSORLG00015006613	-	77	39.164	ENSAOCG00000003133	ncl	55	38.750	Amphiprion_ocellaris
ENSORLG00015006613	-	80	52.854	ENSAOCG00000014792	-	63	52.854	Amphiprion_ocellaris
ENSORLG00015006613	-	77	39.164	ENSAPEG00000002769	ncl	54	38.750	Amphiprion_percula
ENSORLG00015006613	-	80	52.854	ENSAPEG00000013612	-	63	52.854	Amphiprion_percula
ENSORLG00015006613	-	77	39.426	ENSATEG00000013343	ncl	57	39.259	Anabas_testudineus
ENSORLG00015006613	-	77	53.964	ENSATEG00000019862	-	80	53.964	Anabas_testudineus
ENSORLG00015006613	-	73	35.714	ENSAPLG00000012897	-	67	34.293	Anas_platyrhynchos
ENSORLG00015006613	-	79	38.596	ENSACAG00000001006	-	58	35.797	Anolis_carolinensis
ENSORLG00015006613	-	64	40.823	ENSACLG00000026031	ncl	87	39.157	Astatotilapia_calliptera
ENSORLG00015006613	-	78	35.714	ENSAMXG00000001647	ncl	86	37.952	Astyanax_mexicanus
ENSORLG00015006613	-	75	34.921	ENSCPBG00000016444	-	57	33.995	Chrysemys_picta_bellii
ENSORLG00015006613	-	77	39.433	ENSCSEG00000015089	ncl	60	37.745	Cynoglossus_semilaevis
ENSORLG00015006613	-	78	38.360	ENSCVAG00000012600	ncl	56	38.384	Cyprinodon_variegatus
ENSORLG00015006613	-	75	39.785	ENSDARG00000002710	ncl	85	40.751	Danio_rerio
ENSORLG00015006613	-	78	34.351	ENSEBUG00000016173	ncl	53	31.754	Eptatretus_burgeri
ENSORLG00015006613	-	81	40.000	ENSELUG00000022826	-	84	40.099	Esox_lucius
ENSORLG00015006613	-	73	40.110	ENSELUG00000006033	ncl	51	45.652	Esox_lucius
ENSORLG00015006613	-	79	35.930	ENSFALG00000007592	-	61	34.744	Ficedula_albicollis
ENSORLG00015006613	-	77	39.164	ENSFHEG00000018000	ncl	63	38.786	Fundulus_heteroclitus
ENSORLG00015006613	-	74	37.808	ENSGMOG00000001341	ncl	56	37.363	Gadus_morhua
ENSORLG00015006613	-	79	34.509	ENSGALG00000032930	NCL	59	33.647	Gallus_gallus
ENSORLG00015006613	-	77	37.984	ENSGAFG00000015375	ncl	52	37.250	Gambusia_affinis
ENSORLG00015006613	-	77	38.442	ENSGACG00000008970	ncl	62	38.776	Gasterosteus_aculeatus
ENSORLG00015006613	-	75	34.127	ENSGAGG00000013330	-	56	33.586	Gopherus_agassizii
ENSORLG00015006613	-	77	41.053	ENSHBUG00000006869	ncl	58	39.855	Haplochromis_burtoni
ENSORLG00015006613	-	77	38.542	ENSHCOG00000010234	ncl	60	36.830	Hippocampus_comes
ENSORLG00015006613	-	64	38.125	ENSIPUG00000024556	ncl	82	37.168	Ictalurus_punctatus
ENSORLG00015006613	-	77	40.731	ENSKMAG00000008111	ncl	58	39.024	Kryptolebias_marmoratus
ENSORLG00015006613	-	76	47.917	ENSLBEG00000014278	-	86	47.917	Labrus_bergylta
ENSORLG00015006613	-	80	48.363	ENSLBEG00000007915	-	67	48.363	Labrus_bergylta
ENSORLG00015006613	-	77	39.164	ENSLBEG00000019073	ncl	60	38.015	Labrus_bergylta
ENSORLG00015006613	-	79	39.332	ENSLACG00000009328	ncl	65	35.967	Latimeria_chalumnae
ENSORLG00015006613	-	74	34.667	ENSLACG00000022167	-	80	34.103	Latimeria_chalumnae
ENSORLG00015006613	-	75	35.904	ENSLOCG00000004828	ncl	52	36.203	Lepisosteus_oculatus
ENSORLG00015006613	-	81	53.598	ENSMAMG00000003479	-	73	53.350	Mastacembelus_armatus
ENSORLG00015006613	-	77	41.053	ENSMZEG00005017438	ncl	57	40.441	Maylandia_zebra
ENSORLG00015006613	-	73	35.165	ENSMGAG00000008147	-	87	37.109	Meleagris_gallopavo
ENSORLG00015006613	-	64	38.750	ENSMMOG00000008553	ncl	86	37.838	Mola_mola
ENSORLG00015006613	-	78	34.925	ENSMODG00000002470	-	57	33.967	Monodelphis_domestica
ENSORLG00015006613	-	80	36.813	ENSMALG00000014827	ncl	51	36.538	Monopterus_albus
ENSORLG00015006613	-	57	41.343	ENSNBRG00000000146	-	84	40.753	Neolamprologus_brichardi
ENSORLG00015006613	-	57	41.343	ENSNBRG00000001232	ncl	81	40.753	Neolamprologus_brichardi
ENSORLG00015006613	-	78	35.401	ENSMEUG00000012335	-	67	32.059	Notamacropus_eugenii
ENSORLG00015006613	-	77	46.842	ENSONIG00000010631	-	96	44.882	Oreochromis_niloticus
ENSORLG00015006613	-	77	41.053	ENSONIG00000012508	ncl	57	39.855	Oreochromis_niloticus
ENSORLG00015006613	-	80	35.661	ENSOANG00000008732	-	69	33.036	Ornithorhynchus_anatinus
ENSORLG00015006613	-	75	38.544	ENSORLG00000007055	ncl	57	37.063	Oryzias_latipes
ENSORLG00015006613	-	93	96.711	ENSORLG00000004645	-	100	96.711	Oryzias_latipes
ENSORLG00015006613	-	77	38.120	ENSORLG00020017943	ncl	54	37.317	Oryzias_latipes_hni
ENSORLG00015006613	-	99	96.266	ENSORLG00020003497	-	95	96.266	Oryzias_latipes_hni
ENSORLG00015006613	-	77	39.948	ENSOMEG00000020786	ncl	57	37.668	Oryzias_melastigma
ENSORLG00015006613	-	100	68.902	ENSOMEG00000015864	-	100	68.902	Oryzias_melastigma
ENSORLG00015006613	-	78	41.237	ENSPKIG00000002604	ncl	54	40.302	Paramormyrops_kingsleyae
ENSORLG00015006613	-	74	34.853	ENSPSIG00000002361	-	53	34.109	Pelodiscus_sinensis
ENSORLG00015006613	-	77	36.387	ENSPMGG00000004709	ncl	83	36.905	Periophthalmus_magnuspinnatus
ENSORLG00015006613	-	72	35.519	ENSPCIG00000003293	-	55	34.000	Phascolarctos_cinereus
ENSORLG00015006613	-	77	37.076	ENSPFOG00000024205	ncl	53	38.308	Poecilia_formosa
ENSORLG00015006613	-	77	37.076	ENSPLAG00000024026	ncl	52	38.384	Poecilia_latipinna
ENSORLG00015006613	-	77	37.076	ENSPMEG00000006000	ncl	53	38.308	Poecilia_mexicana
ENSORLG00015006613	-	77	41.053	ENSPNYG00000020494	ncl	55	40.704	Pundamilia_nyererei
ENSORLG00015006613	-	78	39.175	ENSPNAG00000006192	ncl	52	38.765	Pygocentrus_nattereri
ENSORLG00015006613	-	72	33.799	ENSSHAG00000002702	-	70	30.303	Sarcophilus_harrisii
ENSORLG00015006613	-	79	40.306	ENSSFOG00015008583	ncl	59	39.152	Scleropages_formosus
ENSORLG00015006613	-	70	33.426	ENSSFOG00015013153	-	87	32.394	Scleropages_formosus
ENSORLG00015006613	-	77	39.426	ENSSMAG00000021241	ncl	57	36.930	Scophthalmus_maximus
ENSORLG00015006613	-	80	53.401	ENSSMAG00000007582	-	70	50.452	Scophthalmus_maximus
ENSORLG00015006613	-	77	39.426	ENSSDUG00000006128	ncl	89	38.404	Seriola_dumerili
ENSORLG00015006613	-	79	53.827	ENSSDUG00000010922	-	74	53.465	Seriola_dumerili
ENSORLG00015006613	-	77	39.164	ENSSLDG00000002012	ncl	55	39.303	Seriola_lalandi_dorsalis
ENSORLG00015006613	-	79	54.847	ENSSLDG00000015784	-	68	54.455	Seriola_lalandi_dorsalis
ENSORLG00015006613	-	76	33.673	ENSSPUG00000008244	-	62	32.850	Sphenodon_punctatus
ENSORLG00015006613	-	79	53.435	ENSSPAG00000001859	-	63	53.435	Stegastes_partitus
ENSORLG00015006613	-	54	40.741	ENSSPAG00000002637	ncl	78	40.070	Stegastes_partitus
ENSORLG00015006613	-	73	37.673	ENSTGUG00000009782	-	67	34.783	Taeniopygia_guttata
ENSORLG00015006613	-	75	36.927	ENSTRUG00000008185	ncl	60	35.817	Takifugu_rubripes
ENSORLG00015006613	-	74	36.757	ENSTNIG00000012186	ncl	64	35.443	Tetraodon_nigroviridis
ENSORLG00015006613	-	73	38.292	ENSXETG00000009517	ncl	52	38.624	Xenopus_tropicalis
ENSORLG00015006613	-	80	46.250	ENSXCOG00000007369	-	93	44.310	Xiphophorus_couchianus
ENSORLG00015006613	-	77	33.245	ENSXCOG00000003524	ncl	74	44.667	Xiphophorus_couchianus
ENSORLG00015006613	-	77	38.243	ENSXMAG00000005914	ncl	53	37.562	Xiphophorus_maculatus