EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015006709 (Gene tree)
Gene ID: -
Gene Symbol: rrp12
Alias: -
Full Name: ribosomal RNA processing 12 homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 17560 bases
Position: chr15:23590770-23608329
Accession: 101167475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015025527	NUC173	PF08161.12	5.5e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015005159	-	4508	XM_004077163	ENSORLP00015025527	1288 (aa)	XP_004077211	-

Gene Model

Click here to download ENSORLG00015006709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006709	rrp12	99	64.049	ENSG00000052749	RRP12	100	78.125	Homo_sapiens
ENSORLG00015006709	rrp12	99	85.280	ENSAPOG00000013355	rrp12	99	85.280	Acanthochromis_polyacanthus
ENSORLG00015006709	rrp12	99	63.951	ENSAMEG00000000134	RRP12	99	64.241	Ailuropoda_melanoleuca
ENSORLG00015006709	rrp12	99	86.865	ENSACIG00000022673	rrp12	99	86.865	Amphilophus_citrinellus
ENSORLG00015006709	rrp12	99	87.812	ENSAOCG00000016149	rrp12	99	87.891	Amphiprion_ocellaris
ENSORLG00015006709	rrp12	99	86.526	ENSAPEG00000016023	rrp12	99	86.604	Amphiprion_percula
ENSORLG00015006709	rrp12	99	86.037	ENSATEG00000022627	rrp12	99	86.037	Anabas_testudineus
ENSORLG00015006709	rrp12	97	60.526	ENSAPLG00000014387	RRP12	99	61.075	Anas_platyrhynchos
ENSORLG00015006709	rrp12	99	59.722	ENSACAG00000002175	RRP12	99	59.814	Anolis_carolinensis
ENSORLG00015006709	rrp12	92	74.342	ENSANAG00000037485	RRP12	99	63.820	Aotus_nancymaae
ENSORLG00015006709	rrp12	99	86.328	ENSACLG00000007354	rrp12	99	86.328	Astatotilapia_calliptera
ENSORLG00015006709	rrp12	99	74.612	ENSAMXG00000012852	rrp12	99	74.688	Astyanax_mexicanus
ENSORLG00015006709	rrp12	99	63.125	ENSBTAG00000002191	RRP12	99	63.439	Bos_taurus
ENSORLG00015006709	rrp12	85	61.818	ENSCJAG00000016549	-	99	61.883	Callithrix_jacchus
ENSORLG00015006709	rrp12	99	63.699	ENSCAFG00000009043	RRP12	99	63.932	Canis_familiaris
ENSORLG00015006709	rrp12	99	63.699	ENSCAFG00020005991	RRP12	99	63.932	Canis_lupus_dingo
ENSORLG00015006709	rrp12	99	60.979	ENSCHIG00000011876	RRP12	99	61.004	Capra_hircus
ENSORLG00015006709	rrp12	53	55.172	ENSTSYG00000030210	-	98	56.250	Carlito_syrichta
ENSORLG00015006709	rrp12	97	57.188	ENSCAPG00000008991	RRP12	97	57.028	Cavia_aperea
ENSORLG00015006709	rrp12	100	63.069	ENSCPOG00000004215	RRP12	99	63.035	Cavia_porcellus
ENSORLG00015006709	rrp12	79	67.111	ENSCCAG00000024088	RRP12	98	68.471	Cebus_capucinus
ENSORLG00015006709	rrp12	70	58.306	ENSCCAG00000033123	-	82	58.343	Cebus_capucinus
ENSORLG00015006709	rrp12	99	59.661	ENSCATG00000045310	RRP12	99	60.000	Cercocebus_atys
ENSORLG00015006709	rrp12	100	62.404	ENSCLAG00000003753	RRP12	99	62.733	Chinchilla_lanigera
ENSORLG00015006709	rrp12	88	62.424	ENSCSAG00000005877	RRP12	99	62.830	Chlorocebus_sabaeus
ENSORLG00015006709	rrp12	56	71.595	ENSCHOG00000003095	-	60	71.547	Choloepus_hoffmanni
ENSORLG00015006709	rrp12	94	63.779	ENSCPBG00000011935	RRP12	96	64.043	Chrysemys_picta_bellii
ENSORLG00015006709	rrp12	64	40.118	ENSCSAVG00000006059	-	99	40.191	Ciona_savignyi
ENSORLG00015006709	rrp12	92	74.342	ENSCANG00000031653	RRP12	99	64.391	Colobus_angolensis_palliatus
ENSORLG00015006709	rrp12	90	63.279	ENSCGRG00001004338	Rrp12	99	63.605	Cricetulus_griseus_chok1gshd
ENSORLG00015006709	rrp12	99	62.983	ENSCGRG00000011965	Rrp12	99	63.276	Cricetulus_griseus_crigri
ENSORLG00015006709	rrp12	99	83.101	ENSCSEG00000007799	rrp12	99	83.307	Cynoglossus_semilaevis
ENSORLG00015006709	rrp12	99	85.703	ENSCVAG00000003418	rrp12	99	86.016	Cyprinodon_variegatus
ENSORLG00015006709	rrp12	99	72.347	ENSDARG00000022410	rrp12	99	72.891	Danio_rerio
ENSORLG00015006709	rrp12	99	63.194	ENSDNOG00000005120	RRP12	99	63.080	Dasypus_novemcinctus
ENSORLG00015006709	rrp12	99	63.413	ENSDORG00000009199	Rrp12	99	64.136	Dipodomys_ordii
ENSORLG00015006709	rrp12	98	30.325	FBgn0030504	CG2691	99	30.223	Drosophila_melanogaster
ENSORLG00015006709	rrp12	91	68.571	ENSETEG00000002455	RRP12	91	68.571	Echinops_telfairi
ENSORLG00015006709	rrp12	86	53.750	ENSEBUG00000006555	rrp12	98	69.231	Eptatretus_burgeri
ENSORLG00015006709	rrp12	99	63.608	ENSEASG00005008693	RRP12	99	64.419	Equus_asinus_asinus
ENSORLG00015006709	rrp12	94	63.331	ENSECAG00000010892	RRP12	99	64.274	Equus_caballus
ENSORLG00015006709	rrp12	64	58.824	ENSEEUG00000005447	-	64	58.824	Erinaceus_europaeus
ENSORLG00015006709	rrp12	100	77.477	ENSELUG00000010510	rrp12	100	77.138	Esox_lucius
ENSORLG00015006709	rrp12	99	63.846	ENSFCAG00000028639	RRP12	99	64.319	Felis_catus
ENSORLG00015006709	rrp12	94	63.413	ENSFALG00000008458	RRP12	99	63.854	Ficedula_albicollis
ENSORLG00015006709	rrp12	99	63.069	ENSFDAG00000019108	RRP12	95	63.150	Fukomys_damarensis
ENSORLG00015006709	rrp12	99	77.847	ENSFHEG00000004148	rrp12	99	77.847	Fundulus_heteroclitus
ENSORLG00015006709	rrp12	99	70.224	ENSGMOG00000004188	rrp12	99	70.479	Gadus_morhua
ENSORLG00015006709	rrp12	99	63.439	ENSGALG00000041331	RRP12	96	63.841	Gallus_gallus
ENSORLG00015006709	rrp12	99	85.792	ENSGAFG00000009038	rrp12	99	85.792	Gambusia_affinis
ENSORLG00015006709	rrp12	99	82.500	ENSGACG00000007175	rrp12	99	82.500	Gasterosteus_aculeatus
ENSORLG00015006709	rrp12	67	66.513	ENSGAGG00000019169	RRP12	99	64.009	Gopherus_agassizii
ENSORLG00015006709	rrp12	99	64.203	ENSGGOG00000014850	RRP12	99	64.264	Gorilla_gorilla
ENSORLG00015006709	rrp12	99	86.406	ENSHBUG00000023527	rrp12	99	86.406	Haplochromis_burtoni
ENSORLG00015006709	rrp12	99	62.992	ENSHGLG00000016772	RRP12	99	63.375	Heterocephalus_glaber_female
ENSORLG00015006709	rrp12	99	62.992	ENSHGLG00100015110	RRP12	99	63.375	Heterocephalus_glaber_male
ENSORLG00015006709	rrp12	99	79.953	ENSHCOG00000019519	rrp12	99	80.375	Hippocampus_comes
ENSORLG00015006709	rrp12	99	73.023	ENSIPUG00000000311	RRP12	99	73.733	Ictalurus_punctatus
ENSORLG00015006709	rrp12	99	63.966	ENSSTOG00000006515	RRP12	99	64.075	Ictidomys_tridecemlineatus
ENSORLG00015006709	rrp12	96	62.590	ENSJJAG00000000110	Rrp12	98	62.530	Jaculus_jaculus
ENSORLG00015006709	rrp12	99	86.016	ENSKMAG00000020621	rrp12	99	86.406	Kryptolebias_marmoratus
ENSORLG00015006709	rrp12	99	81.197	ENSLBEG00000015335	rrp12	99	81.314	Labrus_bergylta
ENSORLG00015006709	rrp12	72	64.419	ENSLACG00000016633	RRP12	81	64.419	Latimeria_chalumnae
ENSORLG00015006709	rrp12	99	69.632	ENSLOCG00000003846	rrp12	99	69.653	Lepisosteus_oculatus
ENSORLG00015006709	rrp12	99	63.566	ENSLAFG00000015965	RRP12	99	63.467	Loxodonta_africana
ENSORLG00015006709	rrp12	92	73.684	ENSMFAG00000041558	RRP12	99	64.469	Macaca_fascicularis
ENSORLG00015006709	rrp12	92	73.684	ENSMMUG00000019634	RRP12	99	64.469	Macaca_mulatta
ENSORLG00015006709	rrp12	92	73.684	ENSMNEG00000036759	RRP12	99	61.676	Macaca_nemestrina
ENSORLG00015006709	rrp12	99	61.318	ENSMLEG00000041317	RRP12	99	61.753	Mandrillus_leucophaeus
ENSORLG00015006709	rrp12	99	83.425	ENSMAMG00000002964	rrp12	99	85.774	Mastacembelus_armatus
ENSORLG00015006709	rrp12	99	86.406	ENSMZEG00005003241	rrp12	99	86.406	Maylandia_zebra
ENSORLG00015006709	rrp12	99	61.402	ENSMGAG00000009829	RRP12	99	61.890	Meleagris_gallopavo
ENSORLG00015006709	rrp12	99	61.094	ENSMAUG00000020743	Rrp12	99	61.004	Mesocricetus_auratus
ENSORLG00015006709	rrp12	99	63.867	ENSMICG00000007624	RRP12	99	64.081	Microcebus_murinus
ENSORLG00015006709	rrp12	100	63.895	ENSMOCG00000006753	Rrp12	99	64.236	Microtus_ochrogaster
ENSORLG00015006709	rrp12	99	82.622	ENSMMOG00000010708	rrp12	99	82.891	Mola_mola
ENSORLG00015006709	rrp12	99	64.374	ENSMODG00000004315	RRP12	99	64.774	Monodelphis_domestica
ENSORLG00015006709	rrp12	99	79.641	ENSMALG00000016560	rrp12	99	84.648	Monopterus_albus
ENSORLG00015006709	rrp12	99	63.817	MGP_CAROLIEiJ_G0022957	Rrp12	99	63.643	Mus_caroli
ENSORLG00015006709	rrp12	99	64.407	ENSMUSG00000035049	Rrp12	99	64.236	Mus_musculus
ENSORLG00015006709	rrp12	100	64.434	MGP_PahariEiJ_G0014447	Rrp12	99	64.391	Mus_pahari
ENSORLG00015006709	rrp12	99	64.638	MGP_SPRETEiJ_G0023878	Rrp12	99	64.469	Mus_spretus
ENSORLG00015006709	rrp12	99	63.741	ENSMPUG00000017046	RRP12	99	64.164	Mustela_putorius_furo
ENSORLG00015006709	rrp12	99	63.825	ENSMLUG00000017160	RRP12	99	64.192	Myotis_lucifugus
ENSORLG00015006709	rrp12	99	63.840	ENSNGAG00000024144	Rrp12	99	63.975	Nannospalax_galili
ENSORLG00015006709	rrp12	99	84.609	ENSNBRG00000009987	rrp12	99	84.531	Neolamprologus_brichardi
ENSORLG00015006709	rrp12	99	55.880	ENSNLEG00000013762	RRP12	99	55.948	Nomascus_leucogenys
ENSORLG00015006709	rrp12	100	58.996	ENSMEUG00000003185	RRP12	99	59.377	Notamacropus_eugenii
ENSORLG00015006709	rrp12	94	67.388	ENSOPRG00000005001	RRP12	93	67.388	Ochotona_princeps
ENSORLG00015006709	rrp12	100	62.432	ENSODEG00000016439	RRP12	99	62.344	Octodon_degus
ENSORLG00015006709	rrp12	99	86.719	ENSONIG00000009528	rrp12	99	86.797	Oreochromis_niloticus
ENSORLG00015006709	rrp12	100	60.629	ENSOANG00000006560	RRP12	99	60.789	Ornithorhynchus_anatinus
ENSORLG00015006709	rrp12	99	63.580	ENSOCUG00000005662	RRP12	99	63.919	Oryctolagus_cuniculus
ENSORLG00015006709	rrp12	100	98.680	ENSORLG00000008688	rrp12	100	98.680	Oryzias_latipes
ENSORLG00015006709	rrp12	97	98.725	ENSORLG00020002355	rrp12	99	98.725	Oryzias_latipes_hni
ENSORLG00015006709	rrp12	97	95.299	ENSOMEG00000002609	rrp12	99	95.299	Oryzias_melastigma
ENSORLG00015006709	rrp12	99	62.932	ENSOGAG00000001626	RRP12	99	62.848	Otolemur_garnettii
ENSORLG00015006709	rrp12	99	62.260	ENSOARG00000009681	RRP12	99	62.365	Ovis_aries
ENSORLG00015006709	rrp12	99	62.327	ENSPPAG00000043885	RRP12	99	62.239	Pan_paniscus
ENSORLG00015006709	rrp12	99	63.769	ENSPPRG00000002029	RRP12	99	64.319	Panthera_pardus
ENSORLG00015006709	rrp12	99	60.915	ENSPTIG00000004428	RRP12	99	61.575	Panthera_tigris_altaica
ENSORLG00015006709	rrp12	99	62.404	ENSPTRG00000002806	RRP12	99	62.317	Pan_troglodytes
ENSORLG00015006709	rrp12	99	64.099	ENSPANG00000021360	RRP12	99	64.469	Papio_anubis
ENSORLG00015006709	rrp12	99	72.664	ENSPKIG00000016516	rrp12	99	72.981	Paramormyrops_kingsleyae
ENSORLG00015006709	rrp12	99	80.187	ENSPMGG00000020217	rrp12	99	80.577	Periophthalmus_magnuspinnatus
ENSORLG00015006709	rrp12	99	64.456	ENSPEMG00000008437	Rrp12	99	64.192	Peromyscus_maniculatus_bairdii
ENSORLG00015006709	rrp12	88	52.614	ENSPMAG00000007493	rrp12	99	46.965	Petromyzon_marinus
ENSORLG00015006709	rrp12	99	63.960	ENSPCIG00000002157	RRP12	99	64.047	Phascolarctos_cinereus
ENSORLG00015006709	rrp12	99	85.714	ENSPFOG00000014975	rrp12	99	85.714	Poecilia_formosa
ENSORLG00015006709	rrp12	99	85.636	ENSPLAG00000009840	rrp12	99	85.636	Poecilia_latipinna
ENSORLG00015006709	rrp12	99	85.714	ENSPMEG00000021871	rrp12	99	85.714	Poecilia_mexicana
ENSORLG00015006709	rrp12	99	82.753	ENSPREG00000020950	rrp12	99	82.753	Poecilia_reticulata
ENSORLG00015006709	rrp12	99	62.895	ENSPPYG00000002528	RRP12	99	62.946	Pongo_abelii
ENSORLG00015006709	rrp12	94	76.271	ENSPCAG00000008967	RRP12	94	76.271	Procavia_capensis
ENSORLG00015006709	rrp12	99	63.861	ENSPCOG00000014009	RRP12	99	64.075	Propithecus_coquereli
ENSORLG00015006709	rrp12	99	61.094	ENSPVAG00000003370	RRP12	99	61.210	Pteropus_vampyrus
ENSORLG00015006709	rrp12	99	86.719	ENSPNYG00000009451	rrp12	99	86.719	Pundamilia_nyererei
ENSORLG00015006709	rrp12	99	74.825	ENSPNAG00000007658	rrp12	99	74.883	Pygocentrus_nattereri
ENSORLG00015006709	rrp12	99	63.608	ENSRNOG00000048495	Rrp12	99	63.665	Rattus_norvegicus
ENSORLG00015006709	rrp12	99	64.176	ENSRBIG00000021296	RRP12	99	64.546	Rhinopithecus_bieti
ENSORLG00015006709	rrp12	99	64.176	ENSRROG00000032482	RRP12	99	64.546	Rhinopithecus_roxellana
ENSORLG00015006709	rrp12	92	73.684	ENSSBOG00000030992	RRP12	99	63.770	Saimiri_boliviensis_boliviensis
ENSORLG00015006709	rrp12	99	63.333	ENSSHAG00000018275	RRP12	99	63.445	Sarcophilus_harrisii
ENSORLG00015006709	rrp12	99	74.381	ENSSFOG00015016400	rrp12	99	75.097	Scleropages_formosus
ENSORLG00015006709	rrp12	99	85.000	ENSSMAG00000004047	rrp12	99	85.312	Scophthalmus_maximus
ENSORLG00015006709	rrp12	99	86.797	ENSSDUG00000022871	rrp12	99	86.797	Seriola_dumerili
ENSORLG00015006709	rrp12	99	86.484	ENSSLDG00000003038	rrp12	99	86.562	Seriola_lalandi_dorsalis
ENSORLG00015006709	rrp12	99	61.687	ENSSPUG00000012221	RRP12	99	61.975	Sphenodon_punctatus
ENSORLG00015006709	rrp12	99	87.891	ENSSPAG00000002261	rrp12	99	88.125	Stegastes_partitus
ENSORLG00015006709	rrp12	100	62.818	ENSSSCG00000010514	RRP12	99	63.227	Sus_scrofa
ENSORLG00015006709	rrp12	89	60.593	ENSTGUG00000009711	RRP12	99	61.106	Taeniopygia_guttata
ENSORLG00015006709	rrp12	99	77.347	ENSTRUG00000012017	rrp12	99	77.500	Takifugu_rubripes
ENSORLG00015006709	rrp12	99	83.320	ENSTNIG00000016522	rrp12	99	83.281	Tetraodon_nigroviridis
ENSORLG00015006709	rrp12	77	75.000	ENSTBEG00000004907	RRP12	79	75.000	Tupaia_belangeri
ENSORLG00015006709	rrp12	100	61.295	ENSTTRG00000009878	RRP12	99	61.616	Tursiops_truncatus
ENSORLG00015006709	rrp12	99	64.055	ENSUAMG00000009092	RRP12	99	64.346	Ursus_americanus
ENSORLG00015006709	rrp12	99	62.336	ENSUMAG00000021621	RRP12	99	63.035	Ursus_maritimus
ENSORLG00015006709	rrp12	99	63.981	ENSVVUG00000023168	RRP12	99	64.003	Vulpes_vulpes
ENSORLG00015006709	rrp12	99	65.507	ENSXETG00000003430	rrp12	99	65.759	Xenopus_tropicalis
ENSORLG00015006709	rrp12	90	84.450	ENSXCOG00000012082	rrp12	97	84.202	Xiphophorus_couchianus
ENSORLG00015006709	rrp12	99	85.558	ENSXMAG00000013498	rrp12	99	85.792	Xiphophorus_maculatus