EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015006764 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 8153 bases
Position: chr11:10415724-10423876
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015005943	DEAD	PF00270.29	7.8e-41	1	1
ENSORLP00015025554	DEAD	PF00270.29	9.4e-26	1	2
ENSORLP00015025554	DEAD	PF00270.29	9.4e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015005093	-	1314	-	ENSORLP00015025554	437 (aa)	-	-
ENSORLT00015005074	-	6703	-	ENSORLP00015005943	486 (aa)	-	-

Gene Model

Click here to download ENSORLG00015006764's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006764's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015006764	-	72	38.889	ENSORLG00015011027	-	63	30.383
ENSORLG00015006764	-	99	81.070	ENSORLG00015005301	ddx6	100	79.839
ENSORLG00015006764	-	80	33.920	ENSORLG00015020167	ddx20	53	33.920
ENSORLG00015006764	-	76	40.323	ENSORLG00015008563	eif4a2	90	40.323
ENSORLG00015006764	-	73	36.339	ENSORLG00015003483	zgc:193690	92	35.860
ENSORLG00015006764	-	72	32.778	ENSORLG00015022548	si:dkey-156n14.5	55	32.778
ENSORLG00015006764	-	81	35.589	ENSORLG00015000447	-	93	35.589
ENSORLG00015006764	-	75	31.551	ENSORLG00015010071	ddx49	80	31.551
ENSORLG00015006764	-	81	35.338	ENSORLG00015019274	ddx39aa	93	35.338
ENSORLG00015006764	-	71	32.768	ENSORLG00015004854	ddx43	54	32.768
ENSORLG00015006764	-	75	35.620	ENSORLG00015008751	ddx19	76	36.096
ENSORLG00015006764	-	80	30.580	ENSORLG00015012361	ddx23	58	30.580
ENSORLG00015006764	-	66	31.003	ENSORLG00015023091	ddx18	51	31.003
ENSORLG00015006764	-	78	30.287	ENSORLG00015017712	ddx47	78	30.446
ENSORLG00015006764	-	72	40.741	ENSORLG00015011446	-	56	31.421
ENSORLG00015006764	-	74	30.233	ENSORLG00015004885	ddx55	72	33.333
ENSORLG00015006764	-	73	30.163	ENSORLG00015004882	DDX41	59	30.623
ENSORLG00015006764	-	69	45.098	ENSORLG00015022438	ddx1	57	45.098
ENSORLG00015006764	-	76	39.516	ENSORLG00015015733	eif4a1b	92	39.516

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006764	-	77	94.933	ENSAPOG00000023627	-	95	94.933	Acanthochromis_polyacanthus
ENSORLG00015006764	-	99	85.361	ENSAPOG00000014829	ddx61	99	85.361	Acanthochromis_polyacanthus
ENSORLG00015006764	-	100	86.653	ENSACIG00000018355	-	100	86.653	Amphilophus_citrinellus
ENSORLG00015006764	-	99	86.598	ENSAOCG00000007627	ddx61	99	86.598	Amphiprion_ocellaris
ENSORLG00015006764	-	100	93.456	ENSAOCG00000006269	-	100	93.456	Amphiprion_ocellaris
ENSORLG00015006764	-	100	93.456	ENSAPEG00000021368	-	100	93.456	Amphiprion_percula
ENSORLG00015006764	-	99	86.598	ENSAPEG00000007293	ddx61	99	86.598	Amphiprion_percula
ENSORLG00015006764	-	100	93.456	ENSAPEG00000020642	-	100	93.456	Amphiprion_percula
ENSORLG00015006764	-	98	85.595	ENSATEG00000011302	ddx61	99	85.595	Anabas_testudineus
ENSORLG00015006764	-	100	91.820	ENSATEG00000005424	-	100	91.820	Anabas_testudineus
ENSORLG00015006764	-	98	86.639	ENSACLG00000027620	ddx61	99	86.639	Astatotilapia_calliptera
ENSORLG00015006764	-	100	93.224	ENSACLG00000003260	-	100	93.224	Astatotilapia_calliptera
ENSORLG00015006764	-	99	87.269	ENSAMXG00000033980	-	98	87.269	Astyanax_mexicanus
ENSORLG00015006764	-	97	86.345	ENSAMXG00000032542	ddx61	99	84.805	Astyanax_mexicanus
ENSORLG00015006764	-	100	91.207	ENSCSEG00000009893	-	100	91.207	Cynoglossus_semilaevis
ENSORLG00015006764	-	100	90.023	ENSCVAG00000011006	-	100	90.023	Cyprinodon_variegatus
ENSORLG00015006764	-	97	86.229	ENSDARG00000018425	ddx61	98	86.229	Danio_rerio
ENSORLG00015006764	-	99	88.548	ENSELUG00000022538	-	99	88.548	Esox_lucius
ENSORLG00015006764	-	98	88.935	ENSELUG00000020545	ddx61	98	88.935	Esox_lucius
ENSORLG00015006764	-	100	90.184	ENSFHEG00000015487	-	100	90.184	Fundulus_heteroclitus
ENSORLG00015006764	-	66	86.544	ENSGMOG00000003561	-	100	87.538	Gadus_morhua
ENSORLG00015006764	-	96	88.421	ENSGMOG00000013762	ddx61	99	87.397	Gadus_morhua
ENSORLG00015006764	-	100	90.612	ENSGAFG00000015865	-	100	90.612	Gambusia_affinis
ENSORLG00015006764	-	99	85.185	ENSGACG00000003401	ddx61	100	85.185	Gasterosteus_aculeatus
ENSORLG00015006764	-	99	92.324	ENSGACG00000002413	-	99	92.324	Gasterosteus_aculeatus
ENSORLG00015006764	-	98	86.848	ENSHBUG00000017832	ddx61	99	86.848	Haplochromis_burtoni
ENSORLG00015006764	-	100	93.224	ENSHBUG00000017033	-	100	93.224	Haplochromis_burtoni
ENSORLG00015006764	-	97	83.544	ENSHCOG00000008184	ddx61	97	83.544	Hippocampus_comes
ENSORLG00015006764	-	100	88.139	ENSHCOG00000012238	-	100	88.139	Hippocampus_comes
ENSORLG00015006764	-	96	85.470	ENSIPUG00000012823	DDX6	97	85.470	Ictalurus_punctatus
ENSORLG00015006764	-	99	86.515	ENSIPUG00000008367	-	99	86.515	Ictalurus_punctatus
ENSORLG00015006764	-	100	93.827	ENSKMAG00000007213	-	100	93.827	Kryptolebias_marmoratus
ENSORLG00015006764	-	98	85.565	ENSLBEG00000001740	ddx61	99	85.565	Labrus_bergylta
ENSORLG00015006764	-	100	91.532	ENSLBEG00000016890	-	100	91.532	Labrus_bergylta
ENSORLG00015006764	-	98	84.711	ENSLACG00000015214	ddx61	100	84.711	Latimeria_chalumnae
ENSORLG00015006764	-	98	51.259	ENSLOCG00000004352	ddx61	98	51.370	Lepisosteus_oculatus
ENSORLG00015006764	-	100	92.653	ENSMAMG00000005559	-	100	92.653	Mastacembelus_armatus
ENSORLG00015006764	-	98	86.820	ENSMAMG00000005321	ddx61	98	86.820	Mastacembelus_armatus
ENSORLG00015006764	-	100	93.224	ENSMZEG00005026268	-	100	93.224	Maylandia_zebra
ENSORLG00015006764	-	98	86.848	ENSMZEG00005003556	ddx61	99	86.848	Maylandia_zebra
ENSORLG00015006764	-	100	92.273	ENSMMOG00000013694	-	100	92.273	Mola_mola
ENSORLG00015006764	-	96	86.141	ENSMMOG00000007415	ddx61	97	86.141	Mola_mola
ENSORLG00015006764	-	73	76.204	ENSMMOG00000008825	-	92	76.204	Mola_mola
ENSORLG00015006764	-	100	92.229	ENSMALG00000013817	-	100	92.229	Monopterus_albus
ENSORLG00015006764	-	98	75.783	ENSMALG00000013776	ddx61	96	75.783	Monopterus_albus
ENSORLG00015006764	-	98	79.707	ENSNBRG00000015800	ddx61	99	79.707	Neolamprologus_brichardi
ENSORLG00015006764	-	100	86.653	ENSNBRG00000015075	-	100	86.653	Neolamprologus_brichardi
ENSORLG00015006764	-	100	93.429	ENSONIG00000013748	-	100	93.429	Oreochromis_niloticus
ENSORLG00015006764	-	98	86.848	ENSONIG00000011418	ddx61	99	86.848	Oreochromis_niloticus
ENSORLG00015006764	-	100	99.383	ENSORLG00000009178	-	100	99.383	Oryzias_latipes
ENSORLG00015006764	-	100	99.588	ENSORLG00020015515	-	100	99.588	Oryzias_latipes_hni
ENSORLG00015006764	-	98	96.977	ENSOMEG00000022326	-	99	96.977	Oryzias_melastigma
ENSORLG00015006764	-	97	89.706	ENSPKIG00000024264	ddx61	98	89.189	Paramormyrops_kingsleyae
ENSORLG00015006764	-	100	81.725	ENSPMGG00000013355	-	100	81.725	Periophthalmus_magnuspinnatus
ENSORLG00015006764	-	100	91.598	ENSPFOG00000005750	-	100	91.598	Poecilia_formosa
ENSORLG00015006764	-	100	91.800	ENSPLAG00000000403	-	100	91.800	Poecilia_latipinna
ENSORLG00015006764	-	100	91.358	ENSPMEG00000023737	-	100	91.358	Poecilia_mexicana
ENSORLG00015006764	-	100	93.224	ENSPNYG00000003986	-	100	93.224	Pundamilia_nyererei
ENSORLG00015006764	-	98	80.620	ENSPNYG00000015045	ddx61	99	80.620	Pundamilia_nyererei
ENSORLG00015006764	-	99	88.223	ENSPNAG00000008742	-	98	88.223	Pygocentrus_nattereri
ENSORLG00015006764	-	98	85.833	ENSPNAG00000024072	ddx61	99	85.833	Pygocentrus_nattereri
ENSORLG00015006764	-	97	88.795	ENSSFOG00015021404	ddx61	97	88.150	Scleropages_formosus
ENSORLG00015006764	-	100	91.411	ENSSMAG00000001793	-	100	91.411	Scophthalmus_maximus
ENSORLG00015006764	-	96	86.752	ENSSMAG00000006591	ddx61	99	85.300	Scophthalmus_maximus
ENSORLG00015006764	-	100	93.673	ENSSDUG00000007530	-	100	93.673	Seriola_dumerili
ENSORLG00015006764	-	96	87.846	ENSSDUG00000009713	ddx61	98	86.792	Seriola_dumerili
ENSORLG00015006764	-	100	93.673	ENSSLDG00000007608	-	100	93.673	Seriola_lalandi_dorsalis
ENSORLG00015006764	-	96	87.633	ENSSLDG00000000132	ddx61	98	86.583	Seriola_lalandi_dorsalis
ENSORLG00015006764	-	100	94.479	ENSSPAG00000013878	-	99	96.190	Stegastes_partitus
ENSORLG00015006764	-	96	88.248	ENSSPAG00000001578	ddx61	99	85.950	Stegastes_partitus
ENSORLG00015006764	-	99	88.934	ENSTRUG00000012432	-	99	88.934	Takifugu_rubripes
ENSORLG00015006764	-	99	89.583	ENSTNIG00000003560	-	100	89.583	Tetraodon_nigroviridis
ENSORLG00015006764	-	100	91.156	ENSXCOG00000001406	-	100	91.156	Xiphophorus_couchianus
ENSORLG00015006764	-	100	91.156	ENSXMAG00000016090	-	100	91.156	Xiphophorus_maculatus