EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015006863 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: -
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 24290 bases
Position: chr18:14224158-14248447
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	1	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	2	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	3	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	4	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	5	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	6	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	7	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	8	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	9	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	10	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	11	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	12	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	13	14
ENSORLP00015006004	KH_1	PF00013.29	1.2e-185	14	14
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	1	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	2	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	3	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	4	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	5	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	6	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	7	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	8	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	9	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	10	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	11	12
ENSORLP00015025583	KH_1	PF00013.29	3.1e-162	12	12

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015004959	-	7199	-	ENSORLP00015006004	1267 (aa)	-	-
ENSORLT00015005013	-	3465	-	ENSORLP00015025583	1154 (aa)	-	-

Gene Model

Click here to download ENSORLG00015006863's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006863's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015006863	hdlbpb	100	71.217	ENSORLG00015004126	hdlbpa	100	70.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006863	hdlbpb	100	95.741	ENSAPOG00000006904	hdlbpb	100	95.741	Acanthochromis_polyacanthus
ENSORLG00015006863	hdlbpb	100	90.416	ENSACIG00000016154	hdlbpb	100	90.652	Amphilophus_citrinellus
ENSORLG00015006863	hdlbpb	100	96.215	ENSAOCG00000004083	hdlbpb	100	96.215	Amphiprion_ocellaris
ENSORLG00015006863	hdlbpb	100	96.057	ENSAPEG00000012270	hdlbpb	100	96.057	Amphiprion_percula
ENSORLG00015006863	hdlbpb	100	94.874	ENSATEG00000019877	hdlbpb	100	94.874	Anabas_testudineus
ENSORLG00015006863	hdlbpb	100	82.163	ENSACAG00000003606	-	100	82.163	Anolis_carolinensis
ENSORLG00015006863	hdlbpb	100	95.505	ENSACLG00000006618	hdlbpb	100	95.505	Astatotilapia_calliptera
ENSORLG00015006863	hdlbpb	100	77.008	ENSAMXG00000019946	hdlbpb	100	77.008	Astyanax_mexicanus
ENSORLG00015006863	hdlbpb	100	94.633	ENSCSEG00000000955	hdlbpb	100	94.750	Cynoglossus_semilaevis
ENSORLG00015006863	hdlbpb	100	95.032	ENSCVAG00000005345	hdlbpb	100	95.032	Cyprinodon_variegatus
ENSORLG00015006863	hdlbpb	99	85.229	ENSDARG00000061864	hdlbpb	99	85.229	Danio_rerio
ENSORLG00015006863	hdlbpb	92	69.658	ENSEBUG00000005304	hdlbpb	96	69.487	Eptatretus_burgeri
ENSORLG00015006863	hdlbpb	100	68.435	ENSELUG00000019925	hdlbpb	100	77.690	Esox_lucius
ENSORLG00015006863	hdlbpb	93	73.149	ENSFHEG00000001701	hdlbpb	100	90.063	Fundulus_heteroclitus
ENSORLG00015006863	hdlbpb	95	87.322	ENSGMOG00000004522	hdlbpb	78	87.322	Gadus_morhua
ENSORLG00015006863	hdlbpb	100	95.347	ENSGAFG00000005278	hdlbpb	100	95.347	Gambusia_affinis
ENSORLG00015006863	hdlbpb	99	91.548	ENSGACG00000019361	hdlbpb	100	91.548	Gasterosteus_aculeatus
ENSORLG00015006863	hdlbpb	100	95.347	ENSHBUG00000018434	hdlbpb	100	95.347	Haplochromis_burtoni
ENSORLG00015006863	hdlbpb	100	84.621	ENSIPUG00000003291	HDLBP	100	84.904	Ictalurus_punctatus
ENSORLG00015006863	hdlbpb	100	95.820	ENSKMAG00000016562	hdlbpb	100	95.820	Kryptolebias_marmoratus
ENSORLG00015006863	hdlbpb	100	94.716	ENSLBEG00000027855	hdlbpb	100	94.716	Labrus_bergylta
ENSORLG00015006863	hdlbpb	100	85.649	ENSLACG00000007661	hdlbpb	90	85.649	Latimeria_chalumnae
ENSORLG00015006863	hdlbpb	100	82.650	ENSLOCG00000013909	hdlbpb	100	82.650	Lepisosteus_oculatus
ENSORLG00015006863	hdlbpb	100	95.426	ENSMAMG00000003035	hdlbpb	100	95.426	Mastacembelus_armatus
ENSORLG00015006863	hdlbpb	100	95.505	ENSMZEG00005021465	hdlbpb	100	95.505	Maylandia_zebra
ENSORLG00015006863	hdlbpb	100	93.528	ENSMMOG00000012525	hdlbpb	100	93.528	Mola_mola
ENSORLG00015006863	hdlbpb	100	93.691	ENSMALG00000008938	hdlbpb	100	93.691	Monopterus_albus
ENSORLG00015006863	hdlbpb	100	95.426	ENSNBRG00000002236	hdlbpb	100	95.426	Neolamprologus_brichardi
ENSORLG00015006863	hdlbpb	100	95.110	ENSONIG00000009211	hdlbpb	100	95.110	Oreochromis_niloticus
ENSORLG00015006863	hdlbpb	100	99.448	ENSORLG00000006581	hdlbpb	100	99.448	Oryzias_latipes
ENSORLG00015006863	hdlbpb	100	99.605	ENSORLG00020010012	hdlbpb	100	99.605	Oryzias_latipes_hni
ENSORLG00015006863	hdlbpb	100	97.790	ENSOMEG00000011131	hdlbpb	100	97.790	Oryzias_melastigma
ENSORLG00015006863	hdlbpb	100	87.451	ENSPKIG00000005966	hdlbpb	100	87.530	Paramormyrops_kingsleyae
ENSORLG00015006863	hdlbpb	86	93.056	ENSPMGG00000019853	hdlbpb	99	93.056	Periophthalmus_magnuspinnatus
ENSORLG00015006863	hdlbpb	92	63.787	ENSPMAG00000000249	-	99	63.666	Petromyzon_marinus
ENSORLG00015006863	hdlbpb	94	75.110	ENSPMAG00000002131	hdlbpb	100	75.110	Petromyzon_marinus
ENSORLG00015006863	hdlbpb	100	94.384	ENSPFOG00000008755	hdlbpb	100	94.384	Poecilia_formosa
ENSORLG00015006863	hdlbpb	100	95.268	ENSPLAG00000007055	hdlbpb	100	95.268	Poecilia_latipinna
ENSORLG00015006863	hdlbpb	100	95.189	ENSPMEG00000001952	hdlbpb	100	95.189	Poecilia_mexicana
ENSORLG00015006863	hdlbpb	100	95.110	ENSPREG00000012848	hdlbpb	100	95.110	Poecilia_reticulata
ENSORLG00015006863	hdlbpb	100	95.268	ENSPNYG00000022467	hdlbpb	100	95.268	Pundamilia_nyererei
ENSORLG00015006863	hdlbpb	100	86.819	ENSPNAG00000011104	hdlbpb	100	86.740	Pygocentrus_nattereri
ENSORLG00015006863	hdlbpb	100	87.214	ENSSFOG00015023199	hdlbpb	100	87.135	Scleropages_formosus
ENSORLG00015006863	hdlbpb	100	94.795	ENSSMAG00000008790	hdlbpb	100	94.795	Scophthalmus_maximus
ENSORLG00015006863	hdlbpb	100	95.741	ENSSDUG00000020694	hdlbpb	100	95.741	Seriola_dumerili
ENSORLG00015006863	hdlbpb	100	95.268	ENSSLDG00000020807	hdlbpb	100	95.268	Seriola_lalandi_dorsalis
ENSORLG00015006863	hdlbpb	100	82.478	ENSSPUG00000018688	-	100	82.478	Sphenodon_punctatus
ENSORLG00015006863	hdlbpb	100	95.978	ENSSPAG00000016969	hdlbpb	100	95.978	Stegastes_partitus
ENSORLG00015006863	hdlbpb	98	91.607	ENSTRUG00000012888	hdlbpb	99	91.607	Takifugu_rubripes
ENSORLG00015006863	hdlbpb	99	92.874	ENSTNIG00000002555	hdlbpb	100	92.874	Tetraodon_nigroviridis
ENSORLG00015006863	hdlbpb	100	72.402	ENSXCOG00000001797	hdlbpb	100	83.393	Xiphophorus_couchianus
ENSORLG00015006863	hdlbpb	100	94.637	ENSXMAG00000015633	hdlbpb	100	94.637	Xiphophorus_maculatus