EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015006869 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 2366 bases
Position: chr12:414442-416807
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006062	Ribosomal_S18	PF01084.20	9.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015004867	-	1992	-	ENSORLP00015006062	129 (aa)	-	-

Gene Model

Click here to download ENSORLG00015006869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015006869's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015006869	mrps18c	100	69.767	ENSAPOG00000019045	mrps18c	100	69.767	Acanthochromis_polyacanthus
ENSORLG00015006869	mrps18c	69	76.404	ENSACIG00000020253	mrps18c	88	76.404	Amphilophus_citrinellus
ENSORLG00015006869	mrps18c	100	68.992	ENSAOCG00000014338	mrps18c	100	68.992	Amphiprion_ocellaris
ENSORLG00015006869	mrps18c	67	82.759	ENSAPEG00000023068	-	88	78.495	Amphiprion_percula
ENSORLG00015006869	mrps18c	100	68.992	ENSAPEG00000022956	mrps18c	100	68.992	Amphiprion_percula
ENSORLG00015006869	mrps18c	98	67.717	ENSATEG00000023417	mrps18c	98	67.717	Anabas_testudineus
ENSORLG00015006869	mrps18c	68	67.045	ENSAPLG00000012544	-	85	67.045	Anas_platyrhynchos
ENSORLG00015006869	mrps18c	71	81.522	ENSACLG00000010521	mrps18c	90	81.522	Astatotilapia_calliptera
ENSORLG00015006869	mrps18c	71	79.121	ENSAMXG00000012238	mrps18c	92	79.121	Astyanax_mexicanus
ENSORLG00015006869	mrps18c	73	65.957	ENSCPBG00000007783	-	58	65.957	Chrysemys_picta_bellii
ENSORLG00015006869	mrps18c	73	75.532	ENSCSEG00000000711	mrps18c	92	60.000	Cynoglossus_semilaevis
ENSORLG00015006869	mrps18c	100	65.116	ENSCVAG00000020169	mrps18c	100	65.116	Cyprinodon_variegatus
ENSORLG00015006869	mrps18c	81	66.355	ENSDARG00000069624	mrps18c	79	66.355	Danio_rerio
ENSORLG00015006869	mrps18c	100	59.398	ENSELUG00000024603	mrps18c	100	59.398	Esox_lucius
ENSORLG00015006869	mrps18c	100	65.116	ENSFHEG00000015550	mrps18c	95	65.116	Fundulus_heteroclitus
ENSORLG00015006869	mrps18c	100	65.116	ENSFHEG00000018752	-	100	65.116	Fundulus_heteroclitus
ENSORLG00015006869	mrps18c	71	65.217	ENSGALG00000023191	MRPS18C	64	65.217	Gallus_gallus
ENSORLG00015006869	mrps18c	100	63.566	ENSGAFG00000008048	mrps18c	83	63.566	Gambusia_affinis
ENSORLG00015006869	mrps18c	73	64.894	ENSGAGG00000015144	-	66	64.894	Gopherus_agassizii
ENSORLG00015006869	mrps18c	100	66.154	ENSHBUG00000002008	mrps18c	100	66.154	Haplochromis_burtoni
ENSORLG00015006869	mrps18c	88	64.957	ENSHCOG00000013161	mrps18c	89	64.957	Hippocampus_comes
ENSORLG00015006869	mrps18c	71	76.923	ENSIPUG00000003783	mrps18c	88	76.923	Ictalurus_punctatus
ENSORLG00015006869	mrps18c	100	67.442	ENSKMAG00000016467	mrps18c	100	67.442	Kryptolebias_marmoratus
ENSORLG00015006869	mrps18c	100	73.077	ENSLBEG00000019174	mrps18c	100	73.077	Labrus_bergylta
ENSORLG00015006869	mrps18c	100	73.077	ENSLBEG00000021861	mrps18c	100	73.077	Labrus_bergylta
ENSORLG00015006869	mrps18c	98	55.906	ENSLACG00000011243	mrps18c	99	55.906	Latimeria_chalumnae
ENSORLG00015006869	mrps18c	93	59.016	ENSLOCG00000012115	mrps18c	90	59.016	Lepisosteus_oculatus
ENSORLG00015006869	mrps18c	100	61.940	ENSMAMG00000012386	mrps18c	100	61.940	Mastacembelus_armatus
ENSORLG00015006869	mrps18c	100	66.154	ENSMZEG00005023278	mrps18c	100	66.154	Maylandia_zebra
ENSORLG00015006869	mrps18c	71	82.609	ENSMMOG00000011316	mrps18c	70	82.609	Mola_mola
ENSORLG00015006869	mrps18c	100	66.154	ENSNBRG00000006182	mrps18c	100	66.154	Neolamprologus_brichardi
ENSORLG00015006869	mrps18c	68	69.318	ENSMEUG00000010972	-	69	69.318	Notamacropus_eugenii
ENSORLG00015006869	mrps18c	100	65.385	ENSONIG00000012527	mrps18c	92	78.495	Oreochromis_niloticus
ENSORLG00015006869	mrps18c	69	93.258	ENSOMEG00000005009	mrps18c	86	93.258	Oryzias_melastigma
ENSORLG00015006869	mrps18c	100	56.204	ENSPKIG00000021736	mrps18c	100	56.204	Paramormyrops_kingsleyae
ENSORLG00015006869	mrps18c	71	86.813	ENSPMGG00000002991	mrps18c	92	86.813	Periophthalmus_magnuspinnatus
ENSORLG00015006869	mrps18c	100	62.791	ENSPFOG00000002351	mrps18c	83	62.791	Poecilia_formosa
ENSORLG00015006869	mrps18c	100	62.791	ENSPLAG00000015187	mrps18c	100	62.791	Poecilia_latipinna
ENSORLG00015006869	mrps18c	100	62.016	ENSPMEG00000014488	mrps18c	83	62.016	Poecilia_mexicana
ENSORLG00015006869	mrps18c	64	75.904	ENSPREG00000012593	mrps18c	85	75.904	Poecilia_reticulata
ENSORLG00015006869	mrps18c	100	65.385	ENSPNYG00000010654	mrps18c	100	65.385	Pundamilia_nyererei
ENSORLG00015006869	mrps18c	75	71.134	ENSPNAG00000009350	mrps18c	91	71.134	Pygocentrus_nattereri
ENSORLG00015006869	mrps18c	84	65.455	ENSSFOG00015019444	mrps18c	81	65.455	Scleropages_formosus
ENSORLG00015006869	mrps18c	100	67.442	ENSSDUG00000015676	mrps18c	100	67.442	Seriola_dumerili
ENSORLG00015006869	mrps18c	87	66.116	ENSSLDG00000002034	mrps18c	94	66.116	Seriola_lalandi_dorsalis
ENSORLG00015006869	mrps18c	88	57.018	ENSSPUG00000013990	-	83	57.018	Sphenodon_punctatus
ENSORLG00015006869	mrps18c	99	68.750	ENSSPAG00000008687	mrps18c	99	68.750	Stegastes_partitus
ENSORLG00015006869	mrps18c	99	65.116	ENSTRUG00000024403	mrps18c	99	65.116	Takifugu_rubripes
ENSORLG00015006869	mrps18c	99	66.667	ENSTNIG00000005674	mrps18c	99	66.667	Tetraodon_nigroviridis
ENSORLG00015006869	mrps18c	74	67.708	ENSXETG00000027597	mrps18c	73	67.708	Xenopus_tropicalis
ENSORLG00015006869	mrps18c	100	61.240	ENSXCOG00000016208	mrps18c	89	75.281	Xiphophorus_couchianus
ENSORLG00015006869	mrps18c	100	63.566	ENSXMAG00000012555	mrps18c	83	63.566	Xiphophorus_maculatus