EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015007018 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: -
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 6088 bases
Position: chr5:32152116-32158203
Accession: ZDB-GENE-091204-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006187	R3H	PF01424.22	2.2e-09	1	1
ENSORLP00015006200	R3H	PF01424.22	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015004619	-	3090	-	ENSORLP00015006187	374 (aa)	-	-
ENSORLT00015004633	-	2695	-	ENSORLP00015006200	374 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007018	r3hcc1	99	33.504	ENSG00000104679	R3HCC1	92	33.850	Homo_sapiens
ENSORLG00015007018	r3hcc1	99	49.628	ENSAPOG00000003616	r3hcc1	89	49.618	Acanthochromis_polyacanthus
ENSORLG00015007018	r3hcc1	99	44.262	ENSACIG00000017144	r3hcc1	95	44.056	Amphilophus_citrinellus
ENSORLG00015007018	r3hcc1	99	49.257	ENSAOCG00000003945	r3hcc1	96	50.636	Amphiprion_ocellaris
ENSORLG00015007018	r3hcc1	99	50.254	ENSAPEG00000003613	r3hcc1	96	49.746	Amphiprion_percula
ENSORLG00015007018	r3hcc1	97	52.051	ENSATEG00000023860	r3hcc1	99	51.980	Anabas_testudineus
ENSORLG00015007018	r3hcc1	98	34.634	ENSACAG00000016627	R3HCC1	90	34.383	Anolis_carolinensis
ENSORLG00015007018	r3hcc1	99	34.447	ENSANAG00000036169	R3HCC1	92	33.933	Aotus_nancymaae
ENSORLG00015007018	r3hcc1	99	34.129	ENSBTAG00000025830	R3HCC1	89	34.053	Bos_taurus
ENSORLG00015007018	r3hcc1	99	33.418	ENSCJAG00000020118	R3HCC1	92	33.163	Callithrix_jacchus
ENSORLG00015007018	r3hcc1	99	33.017	ENSCAFG00000009210	R3HCC1	87	33.902	Canis_familiaris
ENSORLG00015007018	r3hcc1	80	32.000	ENSCAFG00020012870	R3HCC1	78	31.195	Canis_lupus_dingo
ENSORLG00015007018	r3hcc1	99	32.794	ENSCHIG00000009107	R3HCC1	92	33.645	Capra_hircus
ENSORLG00015007018	r3hcc1	97	33.086	ENSTSYG00000000511	R3HCC1	71	33.415	Carlito_syrichta
ENSORLG00015007018	r3hcc1	74	39.007	ENSCAPG00000015813	R3HCC1	63	39.007	Cavia_aperea
ENSORLG00015007018	r3hcc1	79	46.099	ENSCPOG00000009696	R3HCC1	64	44.595	Cavia_porcellus
ENSORLG00015007018	r3hcc1	99	32.990	ENSCCAG00000037811	R3HCC1	92	32.461	Cebus_capucinus
ENSORLG00015007018	r3hcc1	99	34.726	ENSCATG00000032971	R3HCC1	92	34.271	Cercocebus_atys
ENSORLG00015007018	r3hcc1	99	35.208	ENSCLAG00000015556	R3HCC1	78	34.474	Chinchilla_lanigera
ENSORLG00015007018	r3hcc1	97	31.204	ENSCSAG00000016250	R3HCC1	84	32.609	Chlorocebus_sabaeus
ENSORLG00015007018	r3hcc1	99	34.588	ENSCHOG00000000396	R3HCC1	89	34.360	Choloepus_hoffmanni
ENSORLG00015007018	r3hcc1	97	34.383	ENSCANG00000029441	R3HCC1	92	33.687	Colobus_angolensis_palliatus
ENSORLG00015007018	r3hcc1	72	45.455	ENSCGRG00001014977	R3hcc1	61	43.713	Cricetulus_griseus_chok1gshd
ENSORLG00015007018	r3hcc1	72	45.455	ENSCGRG00000004454	R3hcc1	61	43.713	Cricetulus_griseus_crigri
ENSORLG00015007018	r3hcc1	100	49.500	ENSCSEG00000005748	r3hcc1	96	49.750	Cynoglossus_semilaevis
ENSORLG00015007018	r3hcc1	85	45.763	ENSCVAG00000002640	r3hcc1	94	46.110	Cyprinodon_variegatus
ENSORLG00015007018	r3hcc1	98	39.687	ENSDARG00000099593	r3hcc1	92	38.579	Danio_rerio
ENSORLG00015007018	r3hcc1	97	34.053	ENSDNOG00000007168	R3HCC1	84	34.053	Dasypus_novemcinctus
ENSORLG00015007018	r3hcc1	72	43.333	ENSDORG00000026365	R3hcc1	93	31.839	Dipodomys_ordii
ENSORLG00015007018	r3hcc1	99	33.174	ENSEASG00005018782	R3HCC1	74	33.820	Equus_asinus_asinus
ENSORLG00015007018	r3hcc1	99	33.413	ENSECAG00000025013	R3HCC1	90	33.820	Equus_caballus
ENSORLG00015007018	r3hcc1	97	32.603	ENSEEUG00000011918	R3HCC1	88	33.333	Erinaceus_europaeus
ENSORLG00015007018	r3hcc1	98	42.195	ENSELUG00000023650	r3hcc1	98	42.365	Esox_lucius
ENSORLG00015007018	r3hcc1	99	33.573	ENSFCAG00000012395	R3HCC1	89	33.981	Felis_catus
ENSORLG00015007018	r3hcc1	74	44.654	ENSFDAG00000001572	R3HCC1	63	44.654	Fukomys_damarensis
ENSORLG00015007018	r3hcc1	96	39.835	ENSGMOG00000017590	-	91	40.443	Gadus_morhua
ENSORLG00015007018	r3hcc1	100	53.671	ENSGAFG00000008747	-	93	54.593	Gambusia_affinis
ENSORLG00015007018	r3hcc1	97	51.688	ENSGACG00000008447	r3hcc1	90	50.886	Gasterosteus_aculeatus
ENSORLG00015007018	r3hcc1	99	34.026	ENSGGOG00000013817	R3HCC1	92	33.420	Gorilla_gorilla
ENSORLG00015007018	r3hcc1	72	73.770	ENSHBUG00000022250	-	79	73.770	Haplochromis_burtoni
ENSORLG00015007018	r3hcc1	97	33.577	ENSHGLG00000010517	R3HCC1	84	33.741	Heterocephalus_glaber_female
ENSORLG00015007018	r3hcc1	97	33.577	ENSHGLG00100006388	R3HCC1	84	33.741	Heterocephalus_glaber_male
ENSORLG00015007018	r3hcc1	98	51.359	ENSHCOG00000011745	r3hcc1	88	51.467	Hippocampus_comes
ENSORLG00015007018	r3hcc1	98	43.085	ENSIPUG00000024504	r3hcc1	82	43.617	Ictalurus_punctatus
ENSORLG00015007018	r3hcc1	74	43.226	ENSSTOG00000027130	R3HCC1	59	43.226	Ictidomys_tridecemlineatus
ENSORLG00015007018	r3hcc1	71	44.966	ENSJJAG00000013075	R3hcc1	61	42.767	Jaculus_jaculus
ENSORLG00015007018	r3hcc1	100	50.633	ENSKMAG00000000286	r3hcc1	100	50.639	Kryptolebias_marmoratus
ENSORLG00015007018	r3hcc1	99	34.532	ENSLACG00000011894	R3HCC1	61	46.154	Latimeria_chalumnae
ENSORLG00015007018	r3hcc1	98	41.099	ENSLOCG00000015442	r3hcc1	96	41.099	Lepisosteus_oculatus
ENSORLG00015007018	r3hcc1	85	42.945	ENSLAFG00000016137	R3HCC1	62	42.945	Loxodonta_africana
ENSORLG00015007018	r3hcc1	99	34.375	ENSMFAG00000032894	R3HCC1	92	34.286	Macaca_fascicularis
ENSORLG00015007018	r3hcc1	99	34.447	ENSMMUG00000016655	R3HCC1	92	34.204	Macaca_mulatta
ENSORLG00015007018	r3hcc1	99	34.896	ENSMNEG00000043283	R3HCC1	92	34.465	Macaca_nemestrina
ENSORLG00015007018	r3hcc1	99	34.840	ENSMLEG00000030147	R3HCC1	92	34.574	Mandrillus_leucophaeus
ENSORLG00015007018	r3hcc1	100	49.005	ENSMAMG00000018146	r3hcc1	100	49.005	Mastacembelus_armatus
ENSORLG00015007018	r3hcc1	97	33.002	ENSMGAG00000001356	R3HCC1	84	32.353	Meleagris_gallopavo
ENSORLG00015007018	r3hcc1	70	46.809	ENSMAUG00000016096	R3hcc1	59	44.025	Mesocricetus_auratus
ENSORLG00015007018	r3hcc1	99	34.383	ENSMICG00000011146	R3HCC1	92	34.204	Microcebus_murinus
ENSORLG00015007018	r3hcc1	71	46.207	ENSMOCG00000018508	R3hcc1	56	46.207	Microtus_ochrogaster
ENSORLG00015007018	r3hcc1	100	49.005	ENSMALG00000000731	r3hcc1	100	48.756	Monopterus_albus
ENSORLG00015007018	r3hcc1	71	44.828	MGP_CAROLIEiJ_G0019467	R3hcc1	58	42.331	Mus_caroli
ENSORLG00015007018	r3hcc1	71	44.828	ENSMUSG00000034194	R3hcc1	60	43.023	Mus_musculus
ENSORLG00015007018	r3hcc1	71	43.537	MGP_PahariEiJ_G0030484	R3hcc1	54	43.537	Mus_pahari
ENSORLG00015007018	r3hcc1	71	44.828	MGP_SPRETEiJ_G0020359	R3hcc1	60	43.023	Mus_spretus
ENSORLG00015007018	r3hcc1	99	33.172	ENSMPUG00000003457	R3HCC1	81	32.235	Mustela_putorius_furo
ENSORLG00015007018	r3hcc1	97	34.063	ENSMLUG00000000266	R3HCC1	84	33.741	Myotis_lucifugus
ENSORLG00015007018	r3hcc1	69	46.809	ENSNGAG00000016747	R3hcc1	62	43.636	Nannospalax_galili
ENSORLG00015007018	r3hcc1	74	39.203	ENSNBRG00000016975	-	69	38.870	Neolamprologus_brichardi
ENSORLG00015007018	r3hcc1	90	30.789	ENSNLEG00000015944	R3HCC1	80	30.526	Nomascus_leucogenys
ENSORLG00015007018	r3hcc1	99	34.559	ENSMEUG00000010587	R3HCC1	91	35.366	Notamacropus_eugenii
ENSORLG00015007018	r3hcc1	72	42.105	ENSODEG00000007529	R3HCC1	61	40.361	Octodon_degus
ENSORLG00015007018	r3hcc1	97	33.167	ENSOANG00000013877	R3HCC1	89	32.750	Ornithorhynchus_anatinus
ENSORLG00015007018	r3hcc1	99	34.500	ENSOCUG00000023554	R3HCC1	79	34.250	Oryctolagus_cuniculus
ENSORLG00015007018	r3hcc1	100	97.326	ENSORLG00000016816	r3hcc1	100	97.326	Oryzias_latipes
ENSORLG00015007018	r3hcc1	100	97.326	ENSORLG00020012005	r3hcc1	100	97.326	Oryzias_latipes_hni
ENSORLG00015007018	r3hcc1	100	76.190	ENSOMEG00000000816	r3hcc1	100	74.603	Oryzias_melastigma
ENSORLG00015007018	r3hcc1	99	33.017	ENSOGAG00000001291	R3HCC1	84	34.729	Otolemur_garnettii
ENSORLG00015007018	r3hcc1	99	33.489	ENSOARG00000010146	R3HCC1	90	34.129	Ovis_aries
ENSORLG00015007018	r3hcc1	99	33.924	ENSPPAG00000033165	R3HCC1	92	34.109	Pan_paniscus
ENSORLG00015007018	r3hcc1	99	33.573	ENSPPRG00000002522	R3HCC1	93	33.981	Panthera_pardus
ENSORLG00015007018	r3hcc1	94	34.343	ENSPTIG00000011230	R3HCC1	92	34.783	Panthera_tigris_altaica
ENSORLG00015007018	r3hcc1	97	31.527	ENSPTRG00000020076	R3HCC1	92	33.676	Pan_troglodytes
ENSORLG00015007018	r3hcc1	99	34.465	ENSPANG00000000453	R3HCC1	90	35.185	Papio_anubis
ENSORLG00015007018	r3hcc1	96	46.053	ENSPKIG00000020397	-	96	46.053	Paramormyrops_kingsleyae
ENSORLG00015007018	r3hcc1	96	46.361	ENSPKIG00000014426	-	96	46.361	Paramormyrops_kingsleyae
ENSORLG00015007018	r3hcc1	97	35.872	ENSPSIG00000017664	R3HCC1	90	35.468	Pelodiscus_sinensis
ENSORLG00015007018	r3hcc1	56	52.459	ENSPMGG00000007792	r3hcc1	53	51.333	Periophthalmus_magnuspinnatus
ENSORLG00015007018	r3hcc1	71	44.898	ENSPEMG00000007118	R3hcc1	56	44.898	Peromyscus_maniculatus_bairdii
ENSORLG00015007018	r3hcc1	64	43.796	ENSPCIG00000022718	-	82	31.646	Phascolarctos_cinereus
ENSORLG00015007018	r3hcc1	100	52.911	ENSPFOG00000022301	r3hcc1	87	52.911	Poecilia_formosa
ENSORLG00015007018	r3hcc1	100	52.658	ENSPLAG00000010794	r3hcc1	87	53.165	Poecilia_latipinna
ENSORLG00015007018	r3hcc1	100	52.911	ENSPMEG00000022515	r3hcc1	87	52.911	Poecilia_mexicana
ENSORLG00015007018	r3hcc1	100	52.658	ENSPREG00000000713	r3hcc1	87	53.165	Poecilia_reticulata
ENSORLG00015007018	r3hcc1	94	31.472	ENSPPYG00000018436	R3HCC1	95	32.234	Pongo_abelii
ENSORLG00015007018	r3hcc1	74	44.595	ENSPCAG00000012229	R3HCC1	61	44.595	Procavia_capensis
ENSORLG00015007018	r3hcc1	99	34.286	ENSPCOG00000027554	R3HCC1	92	33.933	Propithecus_coquereli
ENSORLG00015007018	r3hcc1	99	33.981	ENSPVAG00000009829	R3HCC1	89	34.307	Pteropus_vampyrus
ENSORLG00015007018	r3hcc1	96	42.308	ENSPNAG00000023875	r3hcc1	94	42.553	Pygocentrus_nattereri
ENSORLG00015007018	r3hcc1	99	32.990	ENSRBIG00000028045	R3HCC1	92	34.115	Rhinopithecus_bieti
ENSORLG00015007018	r3hcc1	99	32.990	ENSRROG00000031126	R3HCC1	92	34.115	Rhinopithecus_roxellana
ENSORLG00015007018	r3hcc1	99	33.077	ENSSBOG00000022590	R3HCC1	93	31.566	Saimiri_boliviensis_boliviensis
ENSORLG00015007018	r3hcc1	99	45.113	ENSSFOG00015013507	r3hcc1	100	43.939	Scleropages_formosus
ENSORLG00015007018	r3hcc1	100	52.956	ENSSMAG00000008647	r3hcc1	100	51.970	Scophthalmus_maximus
ENSORLG00015007018	r3hcc1	100	53.202	ENSSDUG00000022786	r3hcc1	94	54.187	Seriola_dumerili
ENSORLG00015007018	r3hcc1	100	53.941	ENSSLDG00000019031	r3hcc1	94	54.680	Seriola_lalandi_dorsalis
ENSORLG00015007018	r3hcc1	99	51.889	ENSSPAG00000013497	r3hcc1	96	51.786	Stegastes_partitus
ENSORLG00015007018	r3hcc1	99	32.692	ENSSSCG00000039915	-	90	33.333	Sus_scrofa
ENSORLG00015007018	r3hcc1	100	47.545	ENSTRUG00000015880	r3hcc1	95	47.287	Takifugu_rubripes
ENSORLG00015007018	r3hcc1	99	31.655	ENSTTRG00000012247	R3HCC1	89	31.415	Tursiops_truncatus
ENSORLG00015007018	r3hcc1	97	32.763	ENSUAMG00000007344	R3HCC1	91	32.530	Ursus_americanus
ENSORLG00015007018	r3hcc1	99	32.688	ENSVVUG00000005056	R3HCC1	87	33.744	Vulpes_vulpes
ENSORLG00015007018	r3hcc1	97	50.260	ENSXCOG00000017626	r3hcc1	86	51.042	Xiphophorus_couchianus
ENSORLG00015007018	r3hcc1	100	52.645	ENSXMAG00000018375	r3hcc1	93	53.525	Xiphophorus_maculatus