EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007090 (Gene tree)
Gene ID: -
Gene Symbol: parp1
Alias: -
Full Name: poly (ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 12046 bases
Position: chr24:7566037-7578082
Accession: ZDB-GENE-030131-3955
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006234	PARP	PF00644.20	2.6e-74	1	1
ENSORLP00015006238	PARP	PF00644.20	2.9e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015004543	-	4676	-	ENSORLP00015006238	1015 (aa)	-	-
ENSORLT00015004571	-	4595	-	ENSORLP00015006234	988 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007090	parp1	55	41.894	ENSORLG00015009807	parp2	93	43.487
ENSORLG00015007090	parp1	53	33.759	ENSORLG00015003321	parp3	99	34.066

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007090	parp1	100	69.863	ENSG00000143799	PARP1	100	69.863	Homo_sapiens
ENSORLG00015007090	parp1	100	88.966	ENSAPOG00000006414	parp1	100	88.966	Acanthochromis_polyacanthus
ENSORLG00015007090	parp1	99	69.130	ENSAMEG00000014451	PARP1	100	69.534	Ailuropoda_melanoleuca
ENSORLG00015007090	parp1	100	88.867	ENSACIG00000005651	parp1	100	88.867	Amphilophus_citrinellus
ENSORLG00015007090	parp1	100	90.345	ENSAOCG00000021005	parp1	100	90.345	Amphiprion_ocellaris
ENSORLG00015007090	parp1	100	90.345	ENSAPEG00000004784	parp1	100	90.345	Amphiprion_percula
ENSORLG00015007090	parp1	100	89.852	ENSATEG00000010457	parp1	100	89.852	Anabas_testudineus
ENSORLG00015007090	parp1	87	72.707	ENSAPLG00000014039	PARP1	99	72.593	Anas_platyrhynchos
ENSORLG00015007090	parp1	100	71.541	ENSACAG00000006189	PARP1	100	72.031	Anolis_carolinensis
ENSORLG00015007090	parp1	100	69.981	ENSANAG00000032699	PARP1	100	70.450	Aotus_nancymaae
ENSORLG00015007090	parp1	100	88.571	ENSACLG00000015489	parp1	100	88.571	Astatotilapia_calliptera
ENSORLG00015007090	parp1	100	79.941	ENSAMXG00000006465	parp1	100	80.528	Astyanax_mexicanus
ENSORLG00015007090	parp1	100	67.840	ENSBTAG00000000837	PARP1	100	67.937	Bos_taurus
ENSORLG00015007090	parp1	92	44.821	WBGene00004049	parp-1	100	47.126	Caenorhabditis_elegans
ENSORLG00015007090	parp1	100	69.298	ENSCJAG00000012831	PARP1	100	69.765	Callithrix_jacchus
ENSORLG00015007090	parp1	99	68.539	ENSCAFG00000016089	PARP1	100	69.152	Canis_familiaris
ENSORLG00015007090	parp1	100	69.472	ENSCAFG00020001660	PARP1	100	69.569	Canis_lupus_dingo
ENSORLG00015007090	parp1	100	68.200	ENSCHIG00000018072	PARP1	100	67.840	Capra_hircus
ENSORLG00015007090	parp1	99	70.856	ENSTSYG00000003699	PARP1	100	70.856	Carlito_syrichta
ENSORLG00015007090	parp1	99	58.782	ENSCAPG00000011113	-	99	58.279	Cavia_aperea
ENSORLG00015007090	parp1	100	69.892	ENSCPOG00000015643	-	100	69.892	Cavia_porcellus
ENSORLG00015007090	parp1	100	70.352	ENSCCAG00000033484	PARP1	100	70.352	Cebus_capucinus
ENSORLG00015007090	parp1	100	69.561	ENSCATG00000038981	PARP1	100	69.561	Cercocebus_atys
ENSORLG00015007090	parp1	99	69.617	ENSCLAG00000006637	PARP1	99	69.617	Chinchilla_lanigera
ENSORLG00015007090	parp1	66	79.688	ENSCHOG00000003539	PARP1	66	79.688	Choloepus_hoffmanni
ENSORLG00015007090	parp1	99	72.952	ENSCPBG00000011958	PARP1	99	72.952	Chrysemys_picta_bellii
ENSORLG00015007090	parp1	99	69.207	ENSCANG00000041340	PARP1	100	69.207	Colobus_angolensis_palliatus
ENSORLG00015007090	parp1	100	69.442	ENSCGRG00001020559	Parp1	100	69.650	Cricetulus_griseus_chok1gshd
ENSORLG00015007090	parp1	99	69.490	ENSCGRG00000004864	Parp1	100	69.706	Cricetulus_griseus_crigri
ENSORLG00015007090	parp1	100	91.566	ENSCSEG00000020665	parp1	100	91.566	Cynoglossus_semilaevis
ENSORLG00015007090	parp1	99	88.446	ENSCVAG00000021372	parp1	99	88.446	Cyprinodon_variegatus
ENSORLG00015007090	parp1	100	81.060	ENSDARG00000019529	parp1	100	81.427	Danio_rerio
ENSORLG00015007090	parp1	99	68.814	ENSDNOG00000012059	PARP1	100	69.325	Dasypus_novemcinctus
ENSORLG00015007090	parp1	99	67.959	ENSDORG00000005234	Parp1	100	68.571	Dipodomys_ordii
ENSORLG00015007090	parp1	99	41.026	FBgn0010247	Parp	99	40.909	Drosophila_melanogaster
ENSORLG00015007090	parp1	87	79.688	ENSETEG00000013254	PARP1	88	79.688	Echinops_telfairi
ENSORLG00015007090	parp1	99	60.140	ENSEBUG00000005820	parp1	100	59.920	Eptatretus_burgeri
ENSORLG00015007090	parp1	98	69.323	ENSEASG00005013275	PARP1	99	69.920	Equus_asinus_asinus
ENSORLG00015007090	parp1	100	69.472	ENSECAG00000019207	PARP1	100	69.961	Equus_caballus
ENSORLG00015007090	parp1	99	66.765	ENSEEUG00000012253	PARP1	99	67.158	Erinaceus_europaeus
ENSORLG00015007090	parp1	99	82.777	ENSELUG00000017336	parp1	99	82.985	Esox_lucius
ENSORLG00015007090	parp1	97	68.794	ENSFCAG00000005777	PARP1	100	68.997	Felis_catus
ENSORLG00015007090	parp1	99	72.699	ENSFALG00000011578	PARP1	100	72.699	Ficedula_albicollis
ENSORLG00015007090	parp1	99	68.673	ENSFDAG00000017662	PARP1	100	68.673	Fukomys_damarensis
ENSORLG00015007090	parp1	100	87.882	ENSFHEG00000001117	parp1	100	87.882	Fundulus_heteroclitus
ENSORLG00015007090	parp1	99	82.318	ENSGMOG00000014929	parp1	100	82.318	Gadus_morhua
ENSORLG00015007090	parp1	100	73.013	ENSGALG00000009228	PARP1	100	73.013	Gallus_gallus
ENSORLG00015007090	parp1	100	88.374	ENSGAFG00000010450	parp1	100	88.374	Gambusia_affinis
ENSORLG00015007090	parp1	100	88.102	ENSGACG00000011280	parp1	100	88.102	Gasterosteus_aculeatus
ENSORLG00015007090	parp1	99	72.261	ENSGAGG00000010066	PARP1	99	72.512	Gopherus_agassizii
ENSORLG00015007090	parp1	100	69.569	ENSGGOG00000006308	PARP1	100	69.569	Gorilla_gorilla
ENSORLG00015007090	parp1	100	89.557	ENSHBUG00000010490	parp1	100	89.557	Haplochromis_burtoni
ENSORLG00015007090	parp1	96	68.731	ENSHGLG00000003992	PARP1	93	68.731	Heterocephalus_glaber_female
ENSORLG00015007090	parp1	96	68.731	ENSHGLG00100016965	PARP1	93	68.731	Heterocephalus_glaber_male
ENSORLG00015007090	parp1	100	85.098	ENSHCOG00000011619	parp1	100	85.784	Hippocampus_comes
ENSORLG00015007090	parp1	100	80.293	ENSIPUG00000020250	parp1	100	80.273	Ictalurus_punctatus
ENSORLG00015007090	parp1	100	69.863	ENSSTOG00000016000	PARP1	100	69.863	Ictidomys_tridecemlineatus
ENSORLG00015007090	parp1	100	68.756	ENSJJAG00000023497	Parp1	100	69.344	Jaculus_jaculus
ENSORLG00015007090	parp1	100	88.473	ENSKMAG00000011627	parp1	100	88.473	Kryptolebias_marmoratus
ENSORLG00015007090	parp1	100	88.966	ENSLBEG00000013376	parp1	100	88.966	Labrus_bergylta
ENSORLG00015007090	parp1	99	56.667	ENSLACG00000002735	PARP1	99	56.680	Latimeria_chalumnae
ENSORLG00015007090	parp1	100	79.253	ENSLOCG00000015798	parp1	100	79.334	Lepisosteus_oculatus
ENSORLG00015007090	parp1	99	68.400	ENSLAFG00000007830	PARP1	100	68.705	Loxodonta_africana
ENSORLG00015007090	parp1	100	69.561	ENSMFAG00000002526	PARP1	100	69.561	Macaca_fascicularis
ENSORLG00015007090	parp1	100	69.659	ENSMMUG00000021820	PARP1	100	69.659	Macaca_mulatta
ENSORLG00015007090	parp1	100	69.561	ENSMNEG00000034074	PARP1	100	69.561	Macaca_nemestrina
ENSORLG00015007090	parp1	100	67.802	ENSMLEG00000012344	PARP1	100	67.802	Mandrillus_leucophaeus
ENSORLG00015007090	parp1	100	89.064	ENSMAMG00000020652	parp1	100	89.064	Mastacembelus_armatus
ENSORLG00015007090	parp1	100	89.557	ENSMZEG00005016907	parp1	100	89.557	Maylandia_zebra
ENSORLG00015007090	parp1	99	72.979	ENSMGAG00000007760	PARP1	100	72.979	Meleagris_gallopavo
ENSORLG00015007090	parp1	100	69.344	ENSMAUG00000008306	Parp1	100	69.261	Mesocricetus_auratus
ENSORLG00015007090	parp1	100	66.732	ENSMICG00000017076	PARP1	100	66.732	Microcebus_murinus
ENSORLG00015007090	parp1	100	69.148	ENSMOCG00000014315	Parp1	100	69.540	Microtus_ochrogaster
ENSORLG00015007090	parp1	100	88.235	ENSMMOG00000015966	parp1	100	88.235	Mola_mola
ENSORLG00015007090	parp1	100	70.577	ENSMODG00000006076	PARP1	100	70.674	Monodelphis_domestica
ENSORLG00015007090	parp1	100	85.911	ENSMALG00000004057	parp1	100	85.911	Monopterus_albus
ENSORLG00015007090	parp1	100	69.388	MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	Mus_caroli
ENSORLG00015007090	parp1	100	69.298	ENSMUSG00000026496	Parp1	99	78.571	Mus_musculus
ENSORLG00015007090	parp1	100	69.298	MGP_SPRETEiJ_G0015777	Parp1	100	78.571	Mus_spretus
ENSORLG00015007090	parp1	100	69.472	ENSMPUG00000004585	PARP1	100	69.863	Mustela_putorius_furo
ENSORLG00015007090	parp1	73	75.581	ENSMLUG00000012285	PARP1	82	75.581	Myotis_lucifugus
ENSORLG00015007090	parp1	100	69.050	ENSNGAG00000003885	Parp1	100	69.246	Nannospalax_galili
ENSORLG00015007090	parp1	100	88.670	ENSNBRG00000017434	parp1	100	88.670	Neolamprologus_brichardi
ENSORLG00015007090	parp1	97	72.356	ENSNLEG00000013905	PARP1	100	72.356	Nomascus_leucogenys
ENSORLG00015007090	parp1	67	78.806	ENSMEUG00000007720	PARP1	87	78.806	Notamacropus_eugenii
ENSORLG00015007090	parp1	100	71.037	ENSOPRG00000011722	PARP1	100	71.624	Ochotona_princeps
ENSORLG00015007090	parp1	100	69.638	ENSODEG00000007424	PARP1	100	69.638	Octodon_degus
ENSORLG00015007090	parp1	100	88.867	ENSONIG00000013486	parp1	100	88.867	Oreochromis_niloticus
ENSORLG00015007090	parp1	99	71.910	ENSOANG00000001488	PARP1	100	72.449	Ornithorhynchus_anatinus
ENSORLG00015007090	parp1	100	70.283	ENSOCUG00000017820	PARP1	100	70.968	Oryctolagus_cuniculus
ENSORLG00015007090	parp1	100	99.606	ENSORLG00000013691	parp1	100	99.606	Oryzias_latipes
ENSORLG00015007090	parp1	99	99.287	ENSORLG00020001074	parp1	99	99.287	Oryzias_latipes_hni
ENSORLG00015007090	parp1	100	69.765	ENSOGAG00000016206	PARP1	100	69.765	Otolemur_garnettii
ENSORLG00015007090	parp1	100	67.937	ENSOARG00000000811	PARP1	100	67.937	Ovis_aries
ENSORLG00015007090	parp1	100	69.472	ENSPPAG00000040862	PARP1	100	69.472	Pan_paniscus
ENSORLG00015007090	parp1	96	68.502	ENSPPRG00000003528	PARP1	100	68.909	Panthera_pardus
ENSORLG00015007090	parp1	93	57.994	ENSPTIG00000009102	PARP1	98	58.246	Panthera_tigris_altaica
ENSORLG00015007090	parp1	100	69.472	ENSPTRG00000002049	PARP1	100	69.472	Pan_troglodytes
ENSORLG00015007090	parp1	100	69.688	ENSPANG00000011198	PARP1	100	69.688	Papio_anubis
ENSORLG00015007090	parp1	100	79.646	ENSPKIG00000006039	parp1	100	79.744	Paramormyrops_kingsleyae
ENSORLG00015007090	parp1	99	71.458	ENSPSIG00000016374	PARP1	100	71.792	Pelodiscus_sinensis
ENSORLG00015007090	parp1	100	82.434	ENSPMGG00000008936	parp1	100	82.434	Periophthalmus_magnuspinnatus
ENSORLG00015007090	parp1	100	69.561	ENSPEMG00000020230	Parp1	100	69.561	Peromyscus_maniculatus_bairdii
ENSORLG00015007090	parp1	99	70.629	ENSPCIG00000006436	PARP1	99	70.923	Phascolarctos_cinereus
ENSORLG00015007090	parp1	100	87.192	ENSPFOG00000002342	parp1	100	87.192	Poecilia_formosa
ENSORLG00015007090	parp1	100	88.276	ENSPLAG00000000909	parp1	100	88.276	Poecilia_latipinna
ENSORLG00015007090	parp1	100	88.670	ENSPMEG00000013979	parp1	100	88.670	Poecilia_mexicana
ENSORLG00015007090	parp1	100	88.276	ENSPREG00000001114	parp1	100	88.276	Poecilia_reticulata
ENSORLG00015007090	parp1	99	69.254	ENSPPYG00000000164	PARP1	100	69.254	Pongo_abelii
ENSORLG00015007090	parp1	60	78.086	ENSPCAG00000005558	-	59	78.086	Procavia_capensis
ENSORLG00015007090	parp1	100	69.569	ENSPCOG00000016918	PARP1	100	70.157	Propithecus_coquereli
ENSORLG00015007090	parp1	92	76.887	ENSPVAG00000005543	PARP1	92	76.887	Pteropus_vampyrus
ENSORLG00015007090	parp1	100	88.571	ENSPNYG00000009702	parp1	100	88.571	Pundamilia_nyererei
ENSORLG00015007090	parp1	100	82.405	ENSPNAG00000002787	parp1	100	82.991	Pygocentrus_nattereri
ENSORLG00015007090	parp1	100	69.276	ENSRNOG00000003084	Parp1	100	69.388	Rattus_norvegicus
ENSORLG00015007090	parp1	100	69.561	ENSRBIG00000044893	PARP1	99	71.122	Rhinopithecus_bieti
ENSORLG00015007090	parp1	100	51.914	ENSRROG00000040615	-	97	59.481	Rhinopithecus_roxellana
ENSORLG00015007090	parp1	100	69.561	ENSRROG00000029280	PARP1	99	71.122	Rhinopithecus_roxellana
ENSORLG00015007090	parp1	100	70.254	ENSSBOG00000010144	PARP1	100	70.450	Saimiri_boliviensis_boliviensis
ENSORLG00015007090	parp1	99	70.846	ENSSHAG00000001991	PARP1	100	71.050	Sarcophilus_harrisii
ENSORLG00015007090	parp1	100	80.845	ENSSFOG00015020017	parp1	100	80.845	Scleropages_formosus
ENSORLG00015007090	parp1	100	87.882	ENSSMAG00000013799	parp1	100	87.882	Scophthalmus_maximus
ENSORLG00015007090	parp1	100	89.360	ENSSDUG00000016626	parp1	100	89.360	Seriola_dumerili
ENSORLG00015007090	parp1	100	89.360	ENSSLDG00000006384	parp1	100	89.360	Seriola_lalandi_dorsalis
ENSORLG00015007090	parp1	54	77.083	ENSSARG00000009436	-	59	77.083	Sorex_araneus
ENSORLG00015007090	parp1	100	67.682	ENSSPUG00000007790	PARP1	100	68.173	Sphenodon_punctatus
ENSORLG00015007090	parp1	100	87.094	ENSSPAG00000019074	parp1	100	89.677	Stegastes_partitus
ENSORLG00015007090	parp1	100	69.080	ENSSSCG00000023660	PARP1	100	69.569	Sus_scrofa
ENSORLG00015007090	parp1	97	72.204	ENSTGUG00000004260	-	100	72.204	Taeniopygia_guttata
ENSORLG00015007090	parp1	100	85.517	ENSTRUG00000014490	parp1	100	85.517	Takifugu_rubripes
ENSORLG00015007090	parp1	100	85.044	ENSTNIG00000016384	parp1	100	84.946	Tetraodon_nigroviridis
ENSORLG00015007090	parp1	83	75.240	ENSTBEG00000002364	PARP1	92	75.240	Tupaia_belangeri
ENSORLG00015007090	parp1	100	64.677	ENSTTRG00000000188	PARP1	100	64.873	Tursiops_truncatus
ENSORLG00015007090	parp1	96	69.605	ENSUAMG00000014388	PARP1	100	70.010	Ursus_americanus
ENSORLG00015007090	parp1	96	62.703	ENSUMAG00000014555	PARP1	99	63.142	Ursus_maritimus
ENSORLG00015007090	parp1	83	78.431	ENSVPAG00000011411	PARP1	83	78.431	Vicugna_pacos
ENSORLG00015007090	parp1	96	68.539	ENSVVUG00000001655	PARP1	100	68.973	Vulpes_vulpes
ENSORLG00015007090	parp1	98	69.730	ENSXETG00000022610	parp1	99	69.970	Xenopus_tropicalis
ENSORLG00015007090	parp1	100	88.177	ENSXMAG00000003632	parp1	100	88.177	Xiphophorus_maculatus