EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007182 (Gene tree)
Gene ID: -
Gene Symbol: rab18b
Alias: -
Full Name: ras-related protein Rab-18-B
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3586 bases
Position: chr17:15673583-15677168
Accession: 101171031
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006346	MMR_HSR1	PF01926.23	6.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015004415	-	546	-	ENSORLP00015006323	181 (aa)	-	-
ENSORLT00015004385	-	1796	XM_004078915	ENSORLP00015006346	205 (aa)	XP_004078963	UPI0002A4B78F

Gene Model

Click here to download ENSORLG00015007182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007182	rab18b	80	45.122	ENSORLG00015016999	RAB11B	75	45.122
ENSORLG00015007182	rab18b	79	33.537	ENSORLG00015002284	rerg	81	33.537
ENSORLG00015007182	rab18b	83	36.628	ENSORLG00015004033	rab23	75	37.013
ENSORLG00015007182	rab18b	82	36.905	ENSORLG00015014268	rabl2	73	36.905
ENSORLG00015007182	rab18b	80	45.122	ENSORLG00015016946	rab11ba	61	45.122
ENSORLG00015007182	rab18b	85	30.682	ENSORLG00015006780	-	93	30.682
ENSORLG00015007182	rab18b	79	47.561	ENSORLG00015007869	rab12	67	47.561
ENSORLG00015007182	rab18b	80	44.242	ENSORLG00015021900	rab5c	83	42.347
ENSORLG00015007182	rab18b	83	45.614	ENSORLG00015014594	rab3db	77	45.614
ENSORLG00015007182	rab18b	80	42.690	ENSORLG00015013564	-	84	42.857
ENSORLG00015007182	rab18b	93	43.229	ENSORLG00015015518	-	95	43.229
ENSORLG00015007182	rab18b	95	44.498	ENSORLG00015020900	rab2a	97	44.498
ENSORLG00015007182	rab18b	80	32.927	ENSORLG00015003353	zgc:55558	88	32.927
ENSORLG00015007182	rab18b	82	50.588	ENSORLG00015020972	rab30	83	50.588
ENSORLG00015007182	rab18b	79	45.062	ENSORLG00015012725	rab25a	53	45.062
ENSORLG00015007182	rab18b	82	36.471	ENSORLG00015008252	si:ch73-116o1.2	81	36.471
ENSORLG00015007182	rab18b	85	33.146	ENSORLG00015000584	rab34b	65	33.146
ENSORLG00015007182	rab18b	93	33.838	ENSORLG00015020441	-	97	33.838
ENSORLG00015007182	rab18b	80	35.329	ENSORLG00015006820	-	81	35.329
ENSORLG00015007182	rab18b	80	46.667	ENSORLG00015000893	-	76	46.667
ENSORLG00015007182	rab18b	81	34.337	ENSORLG00015011467	kras	93	33.714
ENSORLG00015007182	rab18b	83	41.520	ENSORLG00015010161	RAB41	79	40.351
ENSORLG00015007182	rab18b	79	33.133	ENSORLG00015010005	dnajc27	61	33.133
ENSORLG00015007182	rab18b	80	47.273	ENSORLG00015006881	rab14	76	47.273
ENSORLG00015007182	rab18b	79	46.296	ENSORLG00015019591	rab11al	75	46.296
ENSORLG00015007182	rab18b	80	43.636	ENSORLG00015004377	RAB15	79	43.636
ENSORLG00015007182	rab18b	83	42.442	ENSORLG00015022289	-	81	42.442
ENSORLG00015007182	rab18b	84	33.146	ENSORLG00015002191	rheb	92	33.146
ENSORLG00015007182	rab18b	97	38.424	ENSORLG00015006970	rab6ba	95	38.424
ENSORLG00015007182	rab18b	89	35.135	ENSORLG00015015121	si:dkey-13a21.4	91	35.135
ENSORLG00015007182	rab18b	91	40.741	ENSORLG00015019569	rab25b	92	41.209
ENSORLG00015007182	rab18b	97	38.916	ENSORLG00015006162	rab6a	95	38.916
ENSORLG00015007182	rab18b	71	46.053	ENSORLG00015013453	-	63	46.053
ENSORLG00015007182	rab18b	71	44.898	ENSORLG00015015327	rab33a	53	44.898
ENSORLG00015007182	rab18b	80	38.690	ENSORLG00015004265	rab9b	80	38.690
ENSORLG00015007182	rab18b	83	41.618	ENSORLG00015003202	RAB39B	81	41.618
ENSORLG00015007182	rab18b	80	43.902	ENSORLG00015000142	si:dkey-34d22.5	75	43.902
ENSORLG00015007182	rab18b	86	41.011	ENSORLG00015012854	rab5aa	80	41.011
ENSORLG00015007182	rab18b	87	31.285	ENSORLG00015010289	rras	95	32.632
ENSORLG00015007182	rab18b	80	35.329	ENSORLG00015002344	-	81	35.329
ENSORLG00015007182	rab18b	92	37.561	ENSORLG00015012872	rab33ba	86	37.561
ENSORLG00015007182	rab18b	87	41.711	ENSORLG00015020173	rab11bb	84	42.703
ENSORLG00015007182	rab18b	80	44.512	ENSORLG00015010257	rab11a	76	44.512
ENSORLG00015007182	rab18b	83	48.256	ENSORLG00015010042	rab35b	85	48.256
ENSORLG00015007182	rab18b	83	40.936	ENSORLG00015013537	rab6bb	80	40.936
ENSORLG00015007182	rab18b	79	48.765	ENSORLG00015010098	zgc:171927	76	48.765
ENSORLG00015007182	rab18b	71	40.136	ENSORLG00015016047	zgc:101559	63	40.136
ENSORLG00015007182	rab18b	83	40.462	ENSORLG00015004273	rab42a	79	40.462
ENSORLG00015007182	rab18b	94	40.306	ENSORLG00015017737	rab5ab	90	40.306
ENSORLG00015007182	rab18b	93	84.817	ENSORLG00015004739	rab18a	99	83.824
ENSORLG00015007182	rab18b	95	44.615	ENSORLG00015000618	-	96	44.615
ENSORLG00015007182	rab18b	81	47.024	ENSORLG00015013638	rab15	77	47.024
ENSORLG00015007182	rab18b	95	44.615	ENSORLG00015010986	rab1ab	96	44.615
ENSORLG00015007182	rab18b	95	31.980	ENSORLG00015014829	rab34a	74	31.980

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007182	rab18b	99	83.902	ENSG00000099246	RAB18	99	84.375	Homo_sapiens
ENSORLG00015007182	rab18b	100	92.195	ENSAPOG00000019881	rab18b	100	92.195	Acanthochromis_polyacanthus
ENSORLG00015007182	rab18b	99	73.191	ENSAMEG00000015990	RAB18	99	73.191	Ailuropoda_melanoleuca
ENSORLG00015007182	rab18b	100	92.195	ENSACIG00000008102	rab18b	100	92.195	Amphilophus_citrinellus
ENSORLG00015007182	rab18b	100	92.683	ENSAOCG00000013479	rab18b	100	92.683	Amphiprion_ocellaris
ENSORLG00015007182	rab18b	100	92.195	ENSAPEG00000022923	rab18b	100	92.195	Amphiprion_percula
ENSORLG00015007182	rab18b	100	89.756	ENSATEG00000002952	rab18b	100	89.756	Anabas_testudineus
ENSORLG00015007182	rab18b	99	83.902	ENSANAG00000035856	RAB18	99	83.902	Aotus_nancymaae
ENSORLG00015007182	rab18b	100	91.707	ENSACLG00000015289	rab18b	100	91.707	Astatotilapia_calliptera
ENSORLG00015007182	rab18b	99	85.784	ENSAMXG00000042073	rab18b	99	85.784	Astyanax_mexicanus
ENSORLG00015007182	rab18b	99	83.902	ENSBTAG00000009871	RAB18	88	83.902	Bos_taurus
ENSORLG00015007182	rab18b	99	82.439	ENSBTAG00000050873	-	99	82.439	Bos_taurus
ENSORLG00015007182	rab18b	99	83.902	ENSCJAG00000045749	RAB18	99	83.902	Callithrix_jacchus
ENSORLG00015007182	rab18b	99	83.902	ENSCAFG00020003253	RAB18	99	83.902	Canis_lupus_dingo
ENSORLG00015007182	rab18b	99	83.902	ENSCHIG00000008749	RAB18	99	83.902	Capra_hircus
ENSORLG00015007182	rab18b	99	83.902	ENSTSYG00000013092	RAB18	99	83.902	Carlito_syrichta
ENSORLG00015007182	rab18b	99	83.902	ENSCPOG00000032827	RAB18	99	83.902	Cavia_porcellus
ENSORLG00015007182	rab18b	99	83.902	ENSCCAG00000006762	RAB18	99	83.902	Cebus_capucinus
ENSORLG00015007182	rab18b	99	83.902	ENSCATG00000009672	RAB18	99	83.902	Cercocebus_atys
ENSORLG00015007182	rab18b	99	83.902	ENSCSAG00000011749	RAB18	99	83.902	Chlorocebus_sabaeus
ENSORLG00015007182	rab18b	99	83.902	ENSCANG00000035397	RAB18	99	83.902	Colobus_angolensis_palliatus
ENSORLG00015007182	rab18b	99	83.902	ENSCGRG00001017519	Rab18	99	83.902	Cricetulus_griseus_chok1gshd
ENSORLG00015007182	rab18b	99	83.902	ENSCGRG00000017201	Rab18	99	83.902	Cricetulus_griseus_crigri
ENSORLG00015007182	rab18b	95	91.282	ENSCSEG00000016803	rab18b	99	91.282	Cynoglossus_semilaevis
ENSORLG00015007182	rab18b	99	85.294	ENSDARG00000098344	rab18b	99	85.294	Danio_rerio
ENSORLG00015007182	rab18b	55	85.841	ENSDNOG00000038845	-	75	85.841	Dasypus_novemcinctus
ENSORLG00015007182	rab18b	99	83.902	ENSDNOG00000047713	RAB18	99	83.902	Dasypus_novemcinctus
ENSORLG00015007182	rab18b	99	83.415	ENSDORG00000028596	-	99	83.415	Dipodomys_ordii
ENSORLG00015007182	rab18b	85	81.609	ENSDORG00000029360	-	83	81.609	Dipodomys_ordii
ENSORLG00015007182	rab18b	99	83.902	ENSEASG00005007164	RAB18	99	83.902	Equus_asinus_asinus
ENSORLG00015007182	rab18b	99	83.902	ENSECAG00000017521	RAB18	88	83.902	Equus_caballus
ENSORLG00015007182	rab18b	100	83.010	ENSELUG00000016450	rab18b	100	83.010	Esox_lucius
ENSORLG00015007182	rab18b	91	87.166	ENSFCAG00000027161	RAB18	99	83.902	Felis_catus
ENSORLG00015007182	rab18b	94	84.896	ENSFALG00000007160	RAB18	99	83.495	Ficedula_albicollis
ENSORLG00015007182	rab18b	100	93.659	ENSFHEG00000020035	rab18b	100	93.659	Fundulus_heteroclitus
ENSORLG00015007182	rab18b	100	81.951	ENSGMOG00000016608	rab18b	100	81.951	Gadus_morhua
ENSORLG00015007182	rab18b	99	84.390	ENSGALG00000007435	RAB18	99	84.390	Gallus_gallus
ENSORLG00015007182	rab18b	100	93.659	ENSGAFG00000008560	rab18b	100	93.659	Gambusia_affinis
ENSORLG00015007182	rab18b	100	87.805	ENSGACG00000016395	rab18b	100	87.805	Gasterosteus_aculeatus
ENSORLG00015007182	rab18b	99	83.902	ENSGGOG00000008086	RAB18	99	83.902	Gorilla_gorilla
ENSORLG00015007182	rab18b	100	91.707	ENSHBUG00000003696	rab18b	100	91.707	Haplochromis_burtoni
ENSORLG00015007182	rab18b	99	71.569	ENSHGLG00000007301	-	95	71.569	Heterocephalus_glaber_female
ENSORLG00015007182	rab18b	99	83.902	ENSHGLG00000004365	RAB18	99	83.902	Heterocephalus_glaber_female
ENSORLG00015007182	rab18b	99	83.902	ENSHGLG00100013089	-	99	83.902	Heterocephalus_glaber_male
ENSORLG00015007182	rab18b	99	71.569	ENSHGLG00100009117	-	95	71.569	Heterocephalus_glaber_male
ENSORLG00015007182	rab18b	100	90.732	ENSHCOG00000002217	rab18b	100	90.732	Hippocampus_comes
ENSORLG00015007182	rab18b	99	83.824	ENSIPUG00000010859	rab18b	99	83.824	Ictalurus_punctatus
ENSORLG00015007182	rab18b	99	83.902	ENSSTOG00000014560	-	99	83.902	Ictidomys_tridecemlineatus
ENSORLG00015007182	rab18b	100	92.683	ENSKMAG00000007364	rab18b	100	92.683	Kryptolebias_marmoratus
ENSORLG00015007182	rab18b	100	90.732	ENSLBEG00000019428	rab18b	100	90.732	Labrus_bergylta
ENSORLG00015007182	rab18b	99	75.490	ENSLACG00000011256	rab18b	99	75.490	Latimeria_chalumnae
ENSORLG00015007182	rab18b	94	84.896	ENSLAFG00000015582	RAB18	99	83.902	Loxodonta_africana
ENSORLG00015007182	rab18b	99	83.902	ENSMFAG00000006430	RAB18	99	83.902	Macaca_fascicularis
ENSORLG00015007182	rab18b	98	83.582	ENSMMUG00000046971	RAB18	73	83.582	Macaca_mulatta
ENSORLG00015007182	rab18b	99	83.902	ENSMNEG00000038180	RAB18	99	83.902	Macaca_nemestrina
ENSORLG00015007182	rab18b	99	83.902	ENSMLEG00000033595	RAB18	99	83.902	Mandrillus_leucophaeus
ENSORLG00015007182	rab18b	99	89.216	ENSMAMG00000018445	rab18b	99	89.216	Mastacembelus_armatus
ENSORLG00015007182	rab18b	100	91.707	ENSMZEG00005008244	rab18b	100	91.707	Maylandia_zebra
ENSORLG00015007182	rab18b	99	75.000	ENSMAUG00000020698	-	99	75.000	Mesocricetus_auratus
ENSORLG00015007182	rab18b	94	84.896	ENSMICG00000017280	RAB18	99	83.902	Microcebus_murinus
ENSORLG00015007182	rab18b	99	83.902	ENSMOCG00000013044	Rab18	99	83.902	Microtus_ochrogaster
ENSORLG00015007182	rab18b	100	76.037	ENSMMOG00000017849	rab18b	100	76.959	Mola_mola
ENSORLG00015007182	rab18b	99	75.980	ENSMODG00000024936	-	99	75.980	Monodelphis_domestica
ENSORLG00015007182	rab18b	99	83.824	ENSMODG00000008253	RAB18	99	83.824	Monodelphis_domestica
ENSORLG00015007182	rab18b	99	91.176	ENSMALG00000005069	rab18b	99	91.176	Monopterus_albus
ENSORLG00015007182	rab18b	99	83.902	MGP_CAROLIEiJ_G0021978	Rab18	99	83.902	Mus_caroli
ENSORLG00015007182	rab18b	99	83.902	ENSMUSG00000073639	Rab18	99	83.902	Mus_musculus
ENSORLG00015007182	rab18b	99	83.902	MGP_PahariEiJ_G0018716	Rab18	99	83.902	Mus_pahari
ENSORLG00015007182	rab18b	99	83.902	MGP_SPRETEiJ_G0022894	Rab18	99	83.902	Mus_spretus
ENSORLG00015007182	rab18b	99	83.902	ENSMPUG00000010592	RAB18	99	83.902	Mustela_putorius_furo
ENSORLG00015007182	rab18b	99	73.191	ENSMLUG00000027295	RAB18	99	73.191	Myotis_lucifugus
ENSORLG00015007182	rab18b	99	83.902	ENSNGAG00000001465	Rab18	99	83.902	Nannospalax_galili
ENSORLG00015007182	rab18b	100	91.220	ENSNBRG00000008137	rab18b	100	91.220	Neolamprologus_brichardi
ENSORLG00015007182	rab18b	99	83.902	ENSNLEG00000016970	RAB18	99	83.902	Nomascus_leucogenys
ENSORLG00015007182	rab18b	99	83.902	ENSODEG00000004150	-	99	83.902	Octodon_degus
ENSORLG00015007182	rab18b	100	91.220	ENSONIG00000018673	rab18b	100	91.220	Oreochromis_niloticus
ENSORLG00015007182	rab18b	91	87.701	ENSOANG00000021391	RAB18	99	84.390	Ornithorhynchus_anatinus
ENSORLG00015007182	rab18b	99	82.927	ENSOCUG00000022307	RAB18	99	82.927	Oryctolagus_cuniculus
ENSORLG00015007182	rab18b	100	100.000	ENSORLG00000009609	rab18b	100	100.000	Oryzias_latipes
ENSORLG00015007182	rab18b	100	100.000	ENSORLG00020011590	rab18b	100	100.000	Oryzias_latipes_hni
ENSORLG00015007182	rab18b	100	98.537	ENSOMEG00000007546	rab18b	100	98.537	Oryzias_melastigma
ENSORLG00015007182	rab18b	94	84.896	ENSOGAG00000028015	RAB18	99	84.390	Otolemur_garnettii
ENSORLG00015007182	rab18b	99	83.902	ENSOARG00000016208	RAB18	99	83.902	Ovis_aries
ENSORLG00015007182	rab18b	99	83.902	ENSPPAG00000041625	RAB18	99	83.902	Pan_paniscus
ENSORLG00015007182	rab18b	91	87.166	ENSPPRG00000010314	RAB18	99	83.902	Panthera_pardus
ENSORLG00015007182	rab18b	91	87.166	ENSPTIG00000011667	RAB18	99	83.902	Panthera_tigris_altaica
ENSORLG00015007182	rab18b	99	83.902	ENSPTRG00000002384	RAB18	99	83.902	Pan_troglodytes
ENSORLG00015007182	rab18b	99	83.902	ENSPANG00000023005	RAB18	99	83.902	Papio_anubis
ENSORLG00015007182	rab18b	98	81.463	ENSPMAG00000005322	rab18b	99	81.463	Petromyzon_marinus
ENSORLG00015007182	rab18b	99	84.314	ENSPCIG00000028705	-	88	84.314	Phascolarctos_cinereus
ENSORLG00015007182	rab18b	100	94.146	ENSPFOG00000013491	rab18b	100	94.146	Poecilia_formosa
ENSORLG00015007182	rab18b	100	94.146	ENSPLAG00000019136	rab18b	100	94.146	Poecilia_latipinna
ENSORLG00015007182	rab18b	100	94.146	ENSPMEG00000008223	rab18b	100	94.146	Poecilia_mexicana
ENSORLG00015007182	rab18b	99	83.902	ENSPPYG00000002172	RAB18	99	83.902	Pongo_abelii
ENSORLG00015007182	rab18b	94	84.896	ENSPCOG00000018906	RAB18	99	83.902	Propithecus_coquereli
ENSORLG00015007182	rab18b	100	91.707	ENSPNYG00000001751	rab18b	100	91.707	Pundamilia_nyererei
ENSORLG00015007182	rab18b	99	85.784	ENSPNAG00000002404	rab18b	99	85.784	Pygocentrus_nattereri
ENSORLG00015007182	rab18b	99	83.902	ENSRNOG00000018972	Rab18	99	83.902	Rattus_norvegicus
ENSORLG00015007182	rab18b	99	83.415	ENSRBIG00000035948	RAB18	99	83.415	Rhinopithecus_bieti
ENSORLG00015007182	rab18b	99	83.902	ENSRROG00000040563	RAB18	99	83.902	Rhinopithecus_roxellana
ENSORLG00015007182	rab18b	99	84.314	ENSSHAG00000007613	RAB18	99	84.314	Sarcophilus_harrisii
ENSORLG00015007182	rab18b	100	92.195	ENSSMAG00000011814	rab18b	100	92.195	Scophthalmus_maximus
ENSORLG00015007182	rab18b	100	92.195	ENSSDUG00000005960	rab18b	100	92.195	Seriola_dumerili
ENSORLG00015007182	rab18b	100	92.195	ENSSLDG00000006014	rab18b	100	92.195	Seriola_lalandi_dorsalis
ENSORLG00015007182	rab18b	100	91.707	ENSSPAG00000020875	rab18b	100	91.707	Stegastes_partitus
ENSORLG00015007182	rab18b	99	83.902	ENSSSCG00000028655	RAB18	99	83.902	Sus_scrofa
ENSORLG00015007182	rab18b	94	74.429	ENSTGUG00000001105	-	99	73.820	Taeniopygia_guttata
ENSORLG00015007182	rab18b	100	91.220	ENSTRUG00000004283	rab18b	100	91.220	Takifugu_rubripes
ENSORLG00015007182	rab18b	100	88.350	ENSTNIG00000007882	rab18b	100	88.350	Tetraodon_nigroviridis
ENSORLG00015007182	rab18b	99	83.902	ENSVVUG00000001705	RAB18	99	83.902	Vulpes_vulpes
ENSORLG00015007182	rab18b	100	94.146	ENSXMAG00000006945	rab18b	100	94.146	Xiphophorus_maculatus