EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015007356 (Gene tree)
Gene ID: -
Gene Symbol: thoc1
Alias: -
Full Name: THO complex 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 4623 bases
Position: chr17:29334939-29339561
Accession: 101157731
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015025932	efThoc1	PF11957.8	1.5e-142	1	1
ENSORLP00015025894	efThoc1	PF11957.8	2.3e-142	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015004233	-	1899	-	ENSORLP00015025894	632 (aa)	-	-
ENSORLT00015004148	-	2114	XM_004079415	ENSORLP00015025932	654 (aa)	XP_004079463	-

Gene Model

Click here to download ENSORLG00015007356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007356	thoc1	99	72.393	ENSG00000079134	THOC1	99	77.574	Homo_sapiens
ENSORLG00015007356	thoc1	99	72.393	ENSAMEG00000006645	THOC1	98	72.393	Ailuropoda_melanoleuca
ENSORLG00015007356	thoc1	97	90.228	ENSACIG00000019392	thoc1	95	90.228	Amphilophus_citrinellus
ENSORLG00015007356	thoc1	100	87.768	ENSAOCG00000008391	thoc1	100	87.768	Amphiprion_ocellaris
ENSORLG00015007356	thoc1	100	93.578	ENSAPEG00000001093	thoc1	100	93.578	Amphiprion_percula
ENSORLG00015007356	thoc1	100	93.119	ENSATEG00000004783	thoc1	100	93.119	Anabas_testudineus
ENSORLG00015007356	thoc1	99	72.018	ENSAPLG00000016149	THOC1	98	72.018	Anas_platyrhynchos
ENSORLG00015007356	thoc1	99	72.146	ENSACAG00000008307	THOC1	97	71.537	Anolis_carolinensis
ENSORLG00015007356	thoc1	99	71.775	ENSANAG00000033200	THOC1	98	71.775	Aotus_nancymaae
ENSORLG00015007356	thoc1	100	92.049	ENSACLG00000016836	thoc1	100	92.049	Astatotilapia_calliptera
ENSORLG00015007356	thoc1	99	76.213	ENSAMXG00000014708	thoc1	99	75.900	Astyanax_mexicanus
ENSORLG00015007356	thoc1	99	72.546	ENSBTAG00000019215	THOC1	98	72.546	Bos_taurus
ENSORLG00015007356	thoc1	69	35.622	WBGene00020172	thoc-1	69	35.470	Caenorhabditis_elegans
ENSORLG00015007356	thoc1	99	72.546	ENSCJAG00000020450	THOC1	98	72.546	Callithrix_jacchus
ENSORLG00015007356	thoc1	99	72.393	ENSCAFG00000018324	THOC1	98	72.393	Canis_familiaris
ENSORLG00015007356	thoc1	99	72.393	ENSCAFG00020017894	THOC1	98	72.393	Canis_lupus_dingo
ENSORLG00015007356	thoc1	99	72.546	ENSCHIG00000015399	THOC1	98	73.585	Capra_hircus
ENSORLG00015007356	thoc1	99	72.086	ENSTSYG00000010585	THOC1	98	72.086	Carlito_syrichta
ENSORLG00015007356	thoc1	97	51.788	ENSCAPG00000016270	THOC1	97	51.788	Cavia_aperea
ENSORLG00015007356	thoc1	99	71.319	ENSCPOG00000000959	THOC1	98	71.319	Cavia_porcellus
ENSORLG00015007356	thoc1	99	72.546	ENSCCAG00000025766	THOC1	98	72.546	Cebus_capucinus
ENSORLG00015007356	thoc1	99	70.399	ENSCATG00000028180	THOC1	96	77.168	Cercocebus_atys
ENSORLG00015007356	thoc1	97	73.113	ENSCLAG00000009117	THOC1	99	73.113	Chinchilla_lanigera
ENSORLG00015007356	thoc1	99	72.546	ENSCSAG00000017631	THOC1	98	72.546	Chlorocebus_sabaeus
ENSORLG00015007356	thoc1	82	75.820	ENSCHOG00000010609	THOC1	78	75.519	Choloepus_hoffmanni
ENSORLG00015007356	thoc1	99	73.201	ENSCPBG00000027558	THOC1	99	73.201	Chrysemys_picta_bellii
ENSORLG00015007356	thoc1	70	49.782	ENSCING00000007663	-	93	49.036	Ciona_intestinalis
ENSORLG00015007356	thoc1	95	48.160	ENSCSAVG00000010649	-	99	47.536	Ciona_savignyi
ENSORLG00015007356	thoc1	99	72.393	ENSCANG00000034265	THOC1	96	77.778	Colobus_angolensis_palliatus
ENSORLG00015007356	thoc1	99	71.319	ENSCGRG00001016464	Thoc1	98	71.319	Cricetulus_griseus_chok1gshd
ENSORLG00015007356	thoc1	93	59.114	ENSCGRG00000003390	-	97	59.014	Cricetulus_griseus_crigri
ENSORLG00015007356	thoc1	98	72.031	ENSCGRG00000010269	-	99	72.327	Cricetulus_griseus_crigri
ENSORLG00015007356	thoc1	99	88.146	ENSCSEG00000012486	thoc1	99	88.907	Cynoglossus_semilaevis
ENSORLG00015007356	thoc1	100	91.131	ENSCVAG00000020600	thoc1	100	91.131	Cyprinodon_variegatus
ENSORLG00015007356	thoc1	99	84.202	ENSDARG00000088246	thoc1	99	84.202	Danio_rerio
ENSORLG00015007356	thoc1	99	72.043	ENSDNOG00000019217	THOC1	98	72.043	Dasypus_novemcinctus
ENSORLG00015007356	thoc1	96	70.656	ENSDORG00000008060	Thoc1	98	69.497	Dipodomys_ordii
ENSORLG00015007356	thoc1	81	42.935	FBgn0037382	Hpr1	74	42.391	Drosophila_melanogaster
ENSORLG00015007356	thoc1	90	54.839	ENSETEG00000004165	THOC1	98	54.160	Echinops_telfairi
ENSORLG00015007356	thoc1	95	63.123	ENSEBUG00000005998	thoc1	98	64.179	Eptatretus_burgeri
ENSORLG00015007356	thoc1	99	72.239	ENSEASG00005002549	THOC1	94	72.239	Equus_asinus_asinus
ENSORLG00015007356	thoc1	99	72.393	ENSECAG00000009267	THOC1	88	72.393	Equus_caballus
ENSORLG00015007356	thoc1	79	56.738	ENSEEUG00000012214	-	81	56.738	Erinaceus_europaeus
ENSORLG00015007356	thoc1	100	85.997	ENSELUG00000023277	thoc1	100	85.997	Esox_lucius
ENSORLG00015007356	thoc1	99	72.546	ENSFCAG00000022454	THOC1	85	72.546	Felis_catus
ENSORLG00015007356	thoc1	97	73.167	ENSFALG00000006205	THOC1	99	73.167	Ficedula_albicollis
ENSORLG00015007356	thoc1	98	72.360	ENSFDAG00000006842	THOC1	99	72.360	Fukomys_damarensis
ENSORLG00015007356	thoc1	100	91.131	ENSFHEG00000008841	thoc1	100	91.131	Fundulus_heteroclitus
ENSORLG00015007356	thoc1	99	88.190	ENSGMOG00000011486	thoc1	99	88.190	Gadus_morhua
ENSORLG00015007356	thoc1	99	72.588	ENSGALG00000014915	THOC1	99	71.710	Gallus_gallus
ENSORLG00015007356	thoc1	100	89.602	ENSGAFG00000021464	thoc1	100	89.602	Gambusia_affinis
ENSORLG00015007356	thoc1	100	91.743	ENSGACG00000017361	thoc1	100	91.743	Gasterosteus_aculeatus
ENSORLG00015007356	thoc1	99	73.813	ENSGAGG00000021230	-	97	73.813	Gopherus_agassizii
ENSORLG00015007356	thoc1	99	72.546	ENSGGOG00000003013	THOC1	98	72.546	Gorilla_gorilla
ENSORLG00015007356	thoc1	100	92.355	ENSHBUG00000009096	thoc1	100	92.355	Haplochromis_burtoni
ENSORLG00015007356	thoc1	99	72.546	ENSHGLG00000003712	-	98	72.546	Heterocephalus_glaber_female
ENSORLG00015007356	thoc1	73	66.667	ENSHGLG00000009264	-	98	66.667	Heterocephalus_glaber_female
ENSORLG00015007356	thoc1	99	72.393	ENSHGLG00100003570	THOC1	98	72.393	Heterocephalus_glaber_male
ENSORLG00015007356	thoc1	79	59.043	ENSHGLG00100002225	-	98	59.043	Heterocephalus_glaber_male
ENSORLG00015007356	thoc1	99	70.124	ENSIPUG00000005306	thoc1	92	78.664	Ictalurus_punctatus
ENSORLG00015007356	thoc1	99	72.086	ENSSTOG00000006484	THOC1	98	72.086	Ictidomys_tridecemlineatus
ENSORLG00015007356	thoc1	51	74.613	ENSJJAG00000014893	-	96	72.965	Jaculus_jaculus
ENSORLG00015007356	thoc1	100	91.896	ENSKMAG00000003904	thoc1	100	91.896	Kryptolebias_marmoratus
ENSORLG00015007356	thoc1	100	91.437	ENSLBEG00000020372	thoc1	98	91.437	Labrus_bergylta
ENSORLG00015007356	thoc1	99	73.354	ENSLACG00000014869	THOC1	99	73.047	Latimeria_chalumnae
ENSORLG00015007356	thoc1	100	82.801	ENSLOCG00000002097	thoc1	99	82.496	Lepisosteus_oculatus
ENSORLG00015007356	thoc1	99	72.239	ENSLAFG00000009585	THOC1	98	72.239	Loxodonta_africana
ENSORLG00015007356	thoc1	99	72.546	ENSMFAG00000041520	THOC1	98	72.546	Macaca_fascicularis
ENSORLG00015007356	thoc1	99	72.546	ENSMMUG00000004662	THOC1	98	72.546	Macaca_mulatta
ENSORLG00015007356	thoc1	99	72.546	ENSMNEG00000040177	THOC1	98	72.546	Macaca_nemestrina
ENSORLG00015007356	thoc1	99	72.546	ENSMLEG00000034201	THOC1	98	72.546	Mandrillus_leucophaeus
ENSORLG00015007356	thoc1	97	90.344	ENSMAMG00000016747	thoc1	100	88.995	Mastacembelus_armatus
ENSORLG00015007356	thoc1	100	92.049	ENSMZEG00005024609	thoc1	100	92.049	Maylandia_zebra
ENSORLG00015007356	thoc1	97	72.926	ENSMGAG00000009811	THOC1	99	72.926	Meleagris_gallopavo
ENSORLG00015007356	thoc1	99	71.166	ENSMAUG00000010272	Thoc1	98	71.166	Mesocricetus_auratus
ENSORLG00015007356	thoc1	99	72.393	ENSMICG00000027200	THOC1	98	72.393	Microcebus_murinus
ENSORLG00015007356	thoc1	99	62.736	ENSMOCG00000014924	-	95	61.963	Microtus_ochrogaster
ENSORLG00015007356	thoc1	99	70.399	ENSMOCG00000014536	-	85	70.399	Microtus_ochrogaster
ENSORLG00015007356	thoc1	96	91.013	ENSMMOG00000011772	thoc1	100	91.667	Mola_mola
ENSORLG00015007356	thoc1	99	71.429	ENSMODG00000021482	THOC1	98	71.429	Monodelphis_domestica
ENSORLG00015007356	thoc1	100	90.367	ENSMALG00000021872	thoc1	100	90.367	Monopterus_albus
ENSORLG00015007356	thoc1	99	71.472	MGP_CAROLIEiJ_G0021989	Thoc1	98	71.472	Mus_caroli
ENSORLG00015007356	thoc1	99	71.319	ENSMUSG00000024287	Thoc1	98	71.319	Mus_musculus
ENSORLG00015007356	thoc1	99	71.319	MGP_PahariEiJ_G0018726	Thoc1	98	71.319	Mus_pahari
ENSORLG00015007356	thoc1	99	71.319	MGP_SPRETEiJ_G0022905	Thoc1	98	71.319	Mus_spretus
ENSORLG00015007356	thoc1	99	72.393	ENSMPUG00000005448	THOC1	98	72.393	Mustela_putorius_furo
ENSORLG00015007356	thoc1	61	65.414	ENSMLUG00000024912	-	100	65.414	Myotis_lucifugus
ENSORLG00015007356	thoc1	99	71.319	ENSMLUG00000004090	-	98	71.319	Myotis_lucifugus
ENSORLG00015007356	thoc1	90	66.443	ENSMLUG00000027965	-	99	66.443	Myotis_lucifugus
ENSORLG00015007356	thoc1	99	72.086	ENSNGAG00000001401	-	98	72.086	Nannospalax_galili
ENSORLG00015007356	thoc1	97	57.928	ENSNGAG00000008061	-	97	57.928	Nannospalax_galili
ENSORLG00015007356	thoc1	97	91.162	ENSNBRG00000005991	thoc1	97	90.125	Neolamprologus_brichardi
ENSORLG00015007356	thoc1	99	72.546	ENSNLEG00000006835	THOC1	98	72.546	Nomascus_leucogenys
ENSORLG00015007356	thoc1	88	78.054	ENSMEUG00000009756	THOC1	82	76.231	Notamacropus_eugenii
ENSORLG00015007356	thoc1	99	58.282	ENSOPRG00000001108	THOC1	98	58.282	Ochotona_princeps
ENSORLG00015007356	thoc1	99	67.025	ENSODEG00000006623	THOC1	98	67.025	Octodon_degus
ENSORLG00015007356	thoc1	100	92.049	ENSONIG00000009440	thoc1	98	92.012	Oreochromis_niloticus
ENSORLG00015007356	thoc1	99	72.393	ENSOCUG00000011601	THOC1	98	72.393	Oryctolagus_cuniculus
ENSORLG00015007356	thoc1	100	99.694	ENSORLG00000017629	thoc1	100	99.694	Oryzias_latipes
ENSORLG00015007356	thoc1	100	99.541	ENSORLG00020007567	thoc1	100	99.541	Oryzias_latipes_hni
ENSORLG00015007356	thoc1	100	97.401	ENSOMEG00000008200	thoc1	100	97.401	Oryzias_melastigma
ENSORLG00015007356	thoc1	99	69.172	ENSOGAG00000000470	THOC1	98	69.172	Otolemur_garnettii
ENSORLG00015007356	thoc1	98	73.396	ENSOARG00000009238	THOC1	96	73.396	Ovis_aries
ENSORLG00015007356	thoc1	99	72.546	ENSPPAG00000031812	THOC1	98	72.546	Pan_paniscus
ENSORLG00015007356	thoc1	99	71.933	ENSPPRG00000023794	THOC1	96	76.879	Panthera_pardus
ENSORLG00015007356	thoc1	99	71.933	ENSPTIG00000007469	THOC1	96	76.879	Panthera_tigris_altaica
ENSORLG00015007356	thoc1	99	71.624	ENSPTRG00000009816	THOC1	98	71.624	Pan_troglodytes
ENSORLG00015007356	thoc1	99	71.646	ENSPANG00000008665	THOC1	98	71.646	Papio_anubis
ENSORLG00015007356	thoc1	100	82.595	ENSPKIG00000005906	thoc1	100	83.206	Paramormyrops_kingsleyae
ENSORLG00015007356	thoc1	83	75.901	ENSPSIG00000007691	THOC1	97	75.947	Pelodiscus_sinensis
ENSORLG00015007356	thoc1	97	85.505	ENSPMGG00000008279	thoc1	95	85.323	Periophthalmus_magnuspinnatus
ENSORLG00015007356	thoc1	99	71.166	ENSPEMG00000021789	Thoc1	98	71.166	Peromyscus_maniculatus_bairdii
ENSORLG00015007356	thoc1	76	71.984	ENSPCIG00000026942	THOC1	97	72.041	Phascolarctos_cinereus
ENSORLG00015007356	thoc1	100	89.450	ENSPFOG00000011673	thoc1	100	89.450	Poecilia_formosa
ENSORLG00015007356	thoc1	100	89.755	ENSPLAG00000019648	thoc1	100	89.755	Poecilia_latipinna
ENSORLG00015007356	thoc1	100	89.602	ENSPMEG00000007083	thoc1	100	89.602	Poecilia_mexicana
ENSORLG00015007356	thoc1	100	89.908	ENSPREG00000006719	thoc1	100	89.908	Poecilia_reticulata
ENSORLG00015007356	thoc1	74	75.926	ENSPPYG00000009049	-	98	75.926	Pongo_abelii
ENSORLG00015007356	thoc1	91	73.499	ENSPCAG00000005320	THOC1	91	73.499	Procavia_capensis
ENSORLG00015007356	thoc1	99	71.933	ENSPCOG00000009234	THOC1	98	71.933	Propithecus_coquereli
ENSORLG00015007356	thoc1	99	70.706	ENSPVAG00000004007	THOC1	98	70.706	Pteropus_vampyrus
ENSORLG00015007356	thoc1	100	92.355	ENSPNYG00000019152	thoc1	100	92.355	Pundamilia_nyererei
ENSORLG00015007356	thoc1	100	83.486	ENSPNAG00000023390	thoc1	99	83.308	Pygocentrus_nattereri
ENSORLG00015007356	thoc1	99	48.101	ENSRNOG00000015332	Thoc1	95	49.155	Rattus_norvegicus
ENSORLG00015007356	thoc1	99	71.775	ENSRBIG00000033738	THOC1	99	74.350	Rhinopithecus_bieti
ENSORLG00015007356	thoc1	99	72.546	ENSRROG00000044988	THOC1	96	77.778	Rhinopithecus_roxellana
ENSORLG00015007356	thoc1	99	72.546	ENSSBOG00000016556	THOC1	98	72.546	Saimiri_boliviensis_boliviensis
ENSORLG00015007356	thoc1	99	72.393	ENSSHAG00000014829	THOC1	98	72.393	Sarcophilus_harrisii
ENSORLG00015007356	thoc1	100	86.239	ENSSFOG00015021527	thoc1	100	86.239	Scleropages_formosus
ENSORLG00015007356	thoc1	100	89.799	ENSSMAG00000018465	thoc1	99	89.799	Scophthalmus_maximus
ENSORLG00015007356	thoc1	100	93.119	ENSSDUG00000016810	thoc1	100	93.119	Seriola_dumerili
ENSORLG00015007356	thoc1	100	93.119	ENSSLDG00000015555	thoc1	100	93.119	Seriola_lalandi_dorsalis
ENSORLG00015007356	thoc1	82	80.000	ENSSARG00000006910	THOC1	79	80.000	Sorex_araneus
ENSORLG00015007356	thoc1	98	72.770	ENSSPUG00000007238	THOC1	98	72.000	Sphenodon_punctatus
ENSORLG00015007356	thoc1	100	87.652	ENSSPAG00000018847	thoc1	99	87.652	Stegastes_partitus
ENSORLG00015007356	thoc1	99	72.393	ENSSSCG00000025653	THOC1	93	72.393	Sus_scrofa
ENSORLG00015007356	thoc1	99	72.894	ENSTGUG00000010204	THOC1	99	72.894	Taeniopygia_guttata
ENSORLG00015007356	thoc1	100	89.908	ENSTRUG00000013518	thoc1	100	89.908	Takifugu_rubripes
ENSORLG00015007356	thoc1	100	89.144	ENSTNIG00000008473	thoc1	99	89.144	Tetraodon_nigroviridis
ENSORLG00015007356	thoc1	99	65.184	ENSTBEG00000016920	THOC1	98	65.184	Tupaia_belangeri
ENSORLG00015007356	thoc1	99	66.258	ENSTTRG00000016664	THOC1	98	66.258	Tursiops_truncatus
ENSORLG00015007356	thoc1	99	72.546	ENSUAMG00000002527	THOC1	98	73.239	Ursus_americanus
ENSORLG00015007356	thoc1	99	72.546	ENSUMAG00000019693	THOC1	98	72.546	Ursus_maritimus
ENSORLG00015007356	thoc1	69	66.393	ENSVPAG00000003726	-	66	66.805	Vicugna_pacos
ENSORLG00015007356	thoc1	99	72.393	ENSVVUG00000004384	THOC1	98	72.393	Vulpes_vulpes
ENSORLG00015007356	thoc1	99	70.365	ENSXETG00000003155	thoc1	97	70.365	Xenopus_tropicalis
ENSORLG00015007356	thoc1	97	84.477	ENSXCOG00000016085	thoc1	89	84.528	Xiphophorus_couchianus
ENSORLG00015007356	thoc1	100	89.908	ENSXMAG00000002353	thoc1	100	89.908	Xiphophorus_maculatus