EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007385 (Gene tree)
Gene ID: -
Gene Symbol: e4f1
Alias: -
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 6640 bases
Position: chr8:12520252-12526891
Accession: 101161158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006538	zf-C2H2	PF00096.26	3.4e-29	1	4
ENSORLP00015006538	zf-C2H2	PF00096.26	3.4e-29	2	4
ENSORLP00015006538	zf-C2H2	PF00096.26	3.4e-29	3	4
ENSORLP00015006538	zf-C2H2	PF00096.26	3.4e-29	4	4
ENSORLP00015025978	zf-C2H2	PF00096.26	4.9e-29	1	4
ENSORLP00015025978	zf-C2H2	PF00096.26	4.9e-29	2	4
ENSORLP00015025978	zf-C2H2	PF00096.26	4.9e-29	3	4
ENSORLP00015025978	zf-C2H2	PF00096.26	4.9e-29	4	4
ENSORLP00015006538	zf-met	PF12874.7	4.5e-08	1	2
ENSORLP00015006538	zf-met	PF12874.7	4.5e-08	2	2
ENSORLP00015025978	zf-met	PF12874.7	6e-08	1	2
ENSORLP00015025978	zf-met	PF12874.7	6e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015004034	-	3140	-	ENSORLP00015025978	784 (aa)	-	-
ENSORLT00015004050	-	3065	XM_004071686	ENSORLP00015006538	759 (aa)	XP_004071734	-

Gene Model

Click here to download ENSORLG00015007385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007385	e4f1	70	38.272	ENSORLG00015021496	PRDM15	55	38.750
ENSORLG00015007385	e4f1	55	51.282	ENSORLG00015018781	zgc:66448	62	51.282
ENSORLG00015007385	e4f1	71	41.250	ENSORLG00015012776	-	97	43.750
ENSORLG00015007385	e4f1	60	37.126	ENSORLG00015019986	-	63	37.126
ENSORLG00015007385	e4f1	70	43.210	ENSORLG00015012951	-	98	45.000
ENSORLG00015007385	e4f1	67	45.000	ENSORLG00015014823	-	98	40.230
ENSORLG00015007385	e4f1	64	38.017	ENSORLG00015016085	-	95	47.917
ENSORLG00015007385	e4f1	63	42.056	ENSORLG00015018258	-	92	42.105
ENSORLG00015007385	e4f1	61	43.590	ENSORLG00015018254	-	94	43.590
ENSORLG00015007385	e4f1	61	37.234	ENSORLG00015010720	-	63	37.634
ENSORLG00015007385	e4f1	67	43.023	ENSORLG00015000258	-	96	46.250
ENSORLG00015007385	e4f1	57	38.411	ENSORLG00015007168	-	84	44.444
ENSORLG00015007385	e4f1	65	42.647	ENSORLG00015013160	-	97	42.647
ENSORLG00015007385	e4f1	58	42.759	ENSORLG00015013417	-	96	43.333
ENSORLG00015007385	e4f1	57	39.521	ENSORLG00015012052	-	88	40.000
ENSORLG00015007385	e4f1	60	41.250	ENSORLG00015011917	-	89	41.317
ENSORLG00015007385	e4f1	65	46.753	ENSORLG00015018340	znf236	67	46.753
ENSORLG00015007385	e4f1	58	40.000	ENSORLG00015007986	-	97	41.250
ENSORLG00015007385	e4f1	78	37.500	ENSORLG00015008733	znf646	63	37.500
ENSORLG00015007385	e4f1	62	43.750	ENSORLG00015016558	-	95	43.750
ENSORLG00015007385	e4f1	67	40.625	ENSORLG00015007742	-	92	45.161
ENSORLG00015007385	e4f1	91	44.000	ENSORLG00015008496	-	97	49.315
ENSORLG00015007385	e4f1	58	49.398	ENSORLG00015016741	-	96	47.500
ENSORLG00015007385	e4f1	57	34.884	ENSORLG00015007853	zbtb41	64	36.250
ENSORLG00015007385	e4f1	54	49.020	ENSORLG00015007920	-	99	49.153
ENSORLG00015007385	e4f1	56	43.077	ENSORLG00015009782	-	97	43.750
ENSORLG00015007385	e4f1	51	40.000	ENSORLG00015007146	-	73	40.000
ENSORLG00015007385	e4f1	83	40.741	ENSORLG00015007973	-	66	40.741
ENSORLG00015007385	e4f1	52	40.120	ENSORLG00015011509	-	92	40.120
ENSORLG00015007385	e4f1	66	41.250	ENSORLG00015012187	-	93	41.250
ENSORLG00015007385	e4f1	63	47.500	ENSORLG00015015776	-	98	46.250
ENSORLG00015007385	e4f1	77	42.697	ENSORLG00015013760	prdm5	77	42.697
ENSORLG00015007385	e4f1	57	41.558	ENSORLG00015007200	ZNF319	82	41.558
ENSORLG00015007385	e4f1	71	40.260	ENSORLG00015009684	znf319b	80	40.260
ENSORLG00015007385	e4f1	76	37.662	ENSORLG00015007270	si:ch211-216l23.1	71	37.662
ENSORLG00015007385	e4f1	57	37.333	ENSORLG00015020558	-	76	40.909
ENSORLG00015007385	e4f1	60	38.788	ENSORLG00015014015	-	86	41.250
ENSORLG00015007385	e4f1	56	38.889	ENSORLG00015014916	-	98	45.455
ENSORLG00015007385	e4f1	61	43.421	ENSORLG00015021191	-	81	43.421
ENSORLG00015007385	e4f1	63	41.875	ENSORLG00015012892	-	91	41.875
ENSORLG00015007385	e4f1	65	41.304	ENSORLG00015011730	-	97	41.250
ENSORLG00015007385	e4f1	69	39.474	ENSORLG00015007128	-	97	39.474
ENSORLG00015007385	e4f1	64	46.512	ENSORLG00015011871	-	98	52.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007385	e4f1	100	70.752	ENSCSEG00000015852	e4f1	98	68.281	Cynoglossus_semilaevis
ENSORLG00015007385	e4f1	100	73.890	ENSCVAG00000002788	e4f1	100	74.413	Cyprinodon_variegatus
ENSORLG00015007385	e4f1	71	39.487	ENSEBUG00000016435	e4f1	58	59.434	Eptatretus_burgeri
ENSORLG00015007385	e4f1	99	72.519	ENSFHEG00000022551	e4f1	97	73.096	Fundulus_heteroclitus
ENSORLG00015007385	e4f1	83	64.844	ENSGMOG00000011409	e4f1	95	64.632	Gadus_morhua
ENSORLG00015007385	e4f1	100	73.541	ENSGACG00000011808	e4f1	100	73.127	Gasterosteus_aculeatus
ENSORLG00015007385	e4f1	100	67.224	ENSHCOG00000016455	e4f1	100	66.452	Hippocampus_comes
ENSORLG00015007385	e4f1	100	53.117	ENSIPUG00000005379	e4f1	99	51.425	Ictalurus_punctatus
ENSORLG00015007385	e4f1	100	74.583	ENSLBEG00000026373	e4f1	100	75.738	Labrus_bergylta
ENSORLG00015007385	e4f1	100	68.742	ENSMMOG00000007612	e4f1	100	68.872	Mola_mola
ENSORLG00015007385	e4f1	100	75.804	ENSMALG00000007314	e4f1	100	75.129	Monopterus_albus
ENSORLG00015007385	e4f1	100	98.292	ENSORLG00000009160	e4f1	100	98.292	Oryzias_latipes
ENSORLG00015007385	e4f1	100	98.221	ENSORLG00020017974	e4f1	100	98.221	Oryzias_latipes_hni
ENSORLG00015007385	e4f1	100	93.947	ENSOMEG00000012220	e4f1	100	93.553	Oryzias_melastigma
ENSORLG00015007385	e4f1	100	56.489	ENSPKIG00000001942	e4f1	99	56.051	Paramormyrops_kingsleyae
ENSORLG00015007385	e4f1	92	86.869	ENSPMGG00000020527	e4f1	90	87.671	Periophthalmus_magnuspinnatus
ENSORLG00015007385	e4f1	89	60.659	ENSSFOG00015021291	e4f1	99	59.251	Scleropages_formosus
ENSORLG00015007385	e4f1	100	76.774	ENSSMAG00000014720	e4f1	100	77.161	Scophthalmus_maximus
ENSORLG00015007385	e4f1	96	48.353	ENSSPUG00000011420	E4F1	94	48.079	Sphenodon_punctatus
ENSORLG00015007385	e4f1	100	69.105	ENSTRUG00000005176	e4f1	100	70.366	Takifugu_rubripes
ENSORLG00015007385	e4f1	96	69.272	ENSTNIG00000018001	e4f1	100	69.139	Tetraodon_nigroviridis
ENSORLG00015007385	e4f1	79	67.257	ENSXETG00000016091	e4f1	99	67.257	Xenopus_tropicalis