EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007396 (Gene tree)
Gene ID: -
Gene Symbol: patz1
Alias: -
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 29310 bases
Position: chr5:364988-394297
Accession: ZDB-GENE-111223-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015025986	zf-C2H2	PF00096.26	1.1e-29	1	4
ENSORLP00015025986	zf-C2H2	PF00096.26	1.1e-29	2	4
ENSORLP00015025986	zf-C2H2	PF00096.26	1.1e-29	3	4
ENSORLP00015025986	zf-C2H2	PF00096.26	1.1e-29	4	4
ENSORLP00015006564	zf-C2H2	PF00096.26	2.2e-22	1	3
ENSORLP00015006564	zf-C2H2	PF00096.26	2.2e-22	2	3
ENSORLP00015006564	zf-C2H2	PF00096.26	2.2e-22	3	3
ENSORLP00015025986	zf-met	PF12874.7	3.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015004000	-	3933	-	ENSORLP00015006564	646 (aa)	-	-
ENSORLT00015004016	-	2892	-	ENSORLP00015025986	699 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007396's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007396	patz1	53	30.108	ENSORLG00015002548	-	71	30.108
ENSORLG00015007396	patz1	53	36.747	ENSORLG00015012826	-	54	36.747
ENSORLG00015007396	patz1	59	37.179	ENSORLG00015000258	-	97	42.391
ENSORLG00015007396	patz1	55	31.008	ENSORLG00015011524	-	60	35.795
ENSORLG00015007396	patz1	53	30.357	ENSORLG00015013417	-	96	30.116
ENSORLG00015007396	patz1	57	30.198	ENSORLG00015018258	-	75	30.198
ENSORLG00015007396	patz1	50	32.075	ENSORLG00015016278	hic2	50	37.500
ENSORLG00015007396	patz1	64	32.258	ENSORLG00015000406	hic1	52	33.333
ENSORLG00015007396	patz1	53	30.675	ENSORLG00015011758	-	67	30.675
ENSORLG00015007396	patz1	50	33.480	ENSORLG00015013093	-	52	35.333
ENSORLG00015007396	patz1	53	30.078	ENSORLG00015011917	-	81	30.928
ENSORLG00015007396	patz1	65	32.819	ENSORLG00015016558	-	93	32.819
ENSORLG00015007396	patz1	50	30.769	ENSORLG00015019124	-	80	31.361
ENSORLG00015007396	patz1	56	34.583	ENSORLG00015012339	-	92	34.821
ENSORLG00015007396	patz1	51	36.111	ENSORLG00015018340	znf236	61	36.111
ENSORLG00015007396	patz1	57	31.837	ENSORLG00015011401	-	90	30.667
ENSORLG00015007396	patz1	53	35.795	ENSORLG00015007742	-	91	32.903
ENSORLG00015007396	patz1	56	31.950	ENSORLG00015020558	-	66	31.687
ENSORLG00015007396	patz1	56	32.773	ENSORLG00015008496	-	97	34.568
ENSORLG00015007396	patz1	71	32.632	ENSORLG00015016751	zbtb16	58	32.632
ENSORLG00015007396	patz1	71	35.398	ENSORLG00015007853	zbtb41	62	35.398
ENSORLG00015007396	patz1	53	31.020	ENSORLG00015011153	-	74	33.758
ENSORLG00015007396	patz1	53	36.527	ENSORLG00015007920	-	82	31.092
ENSORLG00015007396	patz1	54	35.036	ENSORLG00015007168	-	93	35.000
ENSORLG00015007396	patz1	53	32.203	ENSORLG00015007164	-	87	32.203
ENSORLG00015007396	patz1	54	31.818	ENSORLG00015010816	-	82	31.818
ENSORLG00015007396	patz1	53	34.043	ENSORLG00015012121	-	73	34.043
ENSORLG00015007396	patz1	57	32.370	ENSORLG00015009782	-	91	32.474
ENSORLG00015007396	patz1	58	33.473	ENSORLG00015016741	-	92	32.075
ENSORLG00015007396	patz1	56	38.462	ENSORLG00015014823	-	89	38.462
ENSORLG00015007396	patz1	54	37.805	ENSORLG00015007146	-	57	37.805
ENSORLG00015007396	patz1	57	30.350	ENSORLG00015007973	-	66	30.350
ENSORLG00015007396	patz1	58	30.855	ENSORLG00015013160	-	83	30.627
ENSORLG00015007396	patz1	50	32.692	ENSORLG00015018099	-	75	32.692
ENSORLG00015007396	patz1	52	36.364	ENSORLG00015007986	-	83	36.364
ENSORLG00015007396	patz1	50	33.987	ENSORLG00015014006	-	82	33.987
ENSORLG00015007396	patz1	55	35.294	ENSORLG00015010933	-	70	35.507
ENSORLG00015007396	patz1	89	34.722	ENSORLG00015010879	ZBTB14	82	42.105
ENSORLG00015007396	patz1	53	31.086	ENSORLG00015012187	-	87	31.086
ENSORLG00015007396	patz1	50	37.324	ENSORLG00015013760	prdm5	69	37.324
ENSORLG00015007396	patz1	53	37.234	ENSORLG00015016649	zbtb34	57	37.963
ENSORLG00015007396	patz1	51	38.686	ENSORLG00015018360	znf341	50	38.686
ENSORLG00015007396	patz1	53	30.734	ENSORLG00015009684	znf319b	80	30.734
ENSORLG00015007396	patz1	73	42.500	ENSORLG00015006618	bcl6b	92	42.500
ENSORLG00015007396	patz1	91	36.552	ENSORLG00015002568	zbtb48	90	36.552
ENSORLG00015007396	patz1	50	38.889	ENSORLG00015007270	si:ch211-216l23.1	75	35.652
ENSORLG00015007396	patz1	54	31.933	ENSORLG00015014015	-	91	31.933
ENSORLG00015007396	patz1	62	39.516	ENSORLG00015016193	bcl6aa	56	39.516
ENSORLG00015007396	patz1	50	31.977	ENSORLG00015007132	-	56	34.416
ENSORLG00015007396	patz1	61	33.197	ENSORLG00015013962	-	66	33.197
ENSORLG00015007396	patz1	53	33.740	ENSORLG00015014916	-	87	33.740
ENSORLG00015007396	patz1	51	30.726	ENSORLG00015021191	-	72	30.726
ENSORLG00015007396	patz1	89	35.433	ENSORLG00015022210	zbtb17	73	35.433
ENSORLG00015007396	patz1	59	31.950	ENSORLG00015012892	-	90	31.274
ENSORLG00015007396	patz1	55	33.143	ENSORLG00015011730	-	91	30.189
ENSORLG00015007396	patz1	59	35.928	ENSORLG00015012951	-	83	35.714
ENSORLG00015007396	patz1	53	31.799	ENSORLG00015012052	-	88	31.799
ENSORLG00015007396	patz1	50	34.426	ENSORLG00015010834	-	68	39.394
ENSORLG00015007396	patz1	50	33.333	ENSORLG00015012840	-	69	34.118
ENSORLG00015007396	patz1	62	31.020	ENSORLG00015007128	-	96	30.709
ENSORLG00015007396	patz1	69	32.353	ENSORLG00015011871	-	97	30.242
ENSORLG00015007396	patz1	65	31.923	ENSORLG00015019853	-	61	31.923
ENSORLG00015007396	patz1	76	31.034	ENSORLG00015012947	zbtb47b	65	30.147
ENSORLG00015007396	patz1	50	30.579	ENSORLG00015012904	-	80	33.880
ENSORLG00015007396	patz1	51	33.333	ENSORLG00015012208	-	84	33.918
ENSORLG00015007396	patz1	59	31.250	ENSORLG00015012776	-	96	31.250
ENSORLG00015007396	patz1	55	31.818	ENSORLG00015017255	-	53	32.184
ENSORLG00015007396	patz1	53	33.610	ENSORLG00015010892	-	81	33.610
ENSORLG00015007396	patz1	56	30.252	ENSORLG00015019986	-	67	30.252
ENSORLG00015007396	patz1	57	41.463	ENSORLG00015015776	-	98	33.333
ENSORLG00015007396	patz1	55	32.203	ENSORLG00015016420	-	80	32.353
ENSORLG00015007396	patz1	57	30.488	ENSORLG00015013102	-	89	30.435
ENSORLG00015007396	patz1	52	34.899	ENSORLG00015016704	-	70	34.899
ENSORLG00015007396	patz1	56	33.202	ENSORLG00015016085	-	93	33.202
ENSORLG00015007396	patz1	54	33.673	ENSORLG00015009384	-	93	38.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007396	patz1	100	58.003	ENSG00000100105	PATZ1	100	58.150	Homo_sapiens
ENSORLG00015007396	patz1	100	85.455	ENSAPOG00000018447	patz1	100	85.455	Acanthochromis_polyacanthus
ENSORLG00015007396	patz1	100	56.735	ENSAMEG00000007074	PATZ1	100	56.676	Ailuropoda_melanoleuca
ENSORLG00015007396	patz1	100	79.090	ENSACIG00000016779	patz1	100	79.090	Amphilophus_citrinellus
ENSORLG00015007396	patz1	100	84.098	ENSAPEG00000013354	patz1	100	84.098	Amphiprion_percula
ENSORLG00015007396	patz1	100	83.503	ENSATEG00000011260	patz1	100	83.503	Anabas_testudineus
ENSORLG00015007396	patz1	88	55.346	ENSAPLG00000003934	PATZ1	99	55.346	Anas_platyrhynchos
ENSORLG00015007396	patz1	100	58.003	ENSANAG00000029603	PATZ1	100	58.150	Aotus_nancymaae
ENSORLG00015007396	patz1	100	67.671	ENSAMXG00000002273	patz1	100	63.545	Astyanax_mexicanus
ENSORLG00015007396	patz1	100	57.856	ENSBTAG00000005478	PATZ1	100	58.003	Bos_taurus
ENSORLG00015007396	patz1	100	58.003	ENSCJAG00000010978	PATZ1	100	58.150	Callithrix_jacchus
ENSORLG00015007396	patz1	100	57.856	ENSCAFG00000013087	PATZ1	99	58.003	Canis_familiaris
ENSORLG00015007396	patz1	100	57.856	ENSCHIG00000020203	PATZ1	100	58.003	Capra_hircus
ENSORLG00015007396	patz1	100	58.150	ENSTSYG00000033183	PATZ1	100	58.297	Carlito_syrichta
ENSORLG00015007396	patz1	100	58.003	ENSCCAG00000028772	PATZ1	100	58.150	Cebus_capucinus
ENSORLG00015007396	patz1	100	58.003	ENSCATG00000006101	PATZ1	100	58.150	Cercocebus_atys
ENSORLG00015007396	patz1	100	55.466	ENSCPBG00000011277	PATZ1	100	55.735	Chrysemys_picta_bellii
ENSORLG00015007396	patz1	100	58.003	ENSCANG00000024972	PATZ1	100	58.150	Colobus_angolensis_palliatus
ENSORLG00015007396	patz1	100	56.535	ENSCGRG00001004071	Patz1	100	56.535	Cricetulus_griseus_chok1gshd
ENSORLG00015007396	patz1	93	56.358	ENSCGRG00000004814	Patz1	100	56.358	Cricetulus_griseus_crigri
ENSORLG00015007396	patz1	100	74.646	ENSCSEG00000001385	patz1	100	74.929	Cynoglossus_semilaevis
ENSORLG00015007396	patz1	100	83.488	ENSCVAG00000007684	patz1	100	83.282	Cyprinodon_variegatus
ENSORLG00015007396	patz1	100	66.057	ENSDARG00000076584	patz1	100	66.057	Danio_rerio
ENSORLG00015007396	patz1	90	56.430	ENSDNOG00000003183	PATZ1	100	56.581	Dasypus_novemcinctus
ENSORLG00015007396	patz1	100	58.003	ENSDORG00000023834	Patz1	100	58.150	Dipodomys_ordii
ENSORLG00015007396	patz1	100	58.003	ENSECAG00000025030	PATZ1	100	58.150	Equus_caballus
ENSORLG00015007396	patz1	100	72.709	ENSELUG00000002333	patz1	100	72.709	Esox_lucius
ENSORLG00015007396	patz1	100	57.856	ENSFCAG00000030253	PATZ1	100	58.003	Felis_catus
ENSORLG00015007396	patz1	89	55.607	ENSFALG00000007450	PATZ1	100	55.607	Ficedula_albicollis
ENSORLG00015007396	patz1	97	53.814	ENSFDAG00000005614	PATZ1	100	53.955	Fukomys_damarensis
ENSORLG00015007396	patz1	100	83.589	ENSFHEG00000014755	patz1	100	83.742	Fundulus_heteroclitus
ENSORLG00015007396	patz1	100	69.014	ENSGMOG00000001062	patz1	100	69.155	Gadus_morhua
ENSORLG00015007396	patz1	100	54.752	ENSGALG00000006934	PATZ1	100	55.214	Gallus_gallus
ENSORLG00015007396	patz1	100	84.025	ENSGAFG00000010053	patz1	100	84.793	Gambusia_affinis
ENSORLG00015007396	patz1	88	55.591	ENSGAGG00000003214	PATZ1	100	55.591	Gopherus_agassizii
ENSORLG00015007396	patz1	100	58.003	ENSGGOG00000017171	PATZ1	100	58.150	Gorilla_gorilla
ENSORLG00015007396	patz1	100	78.341	ENSHCOG00000017644	patz1	93	78.341	Hippocampus_comes
ENSORLG00015007396	patz1	100	66.802	ENSIPUG00000017653	patz1	99	66.802	Ictalurus_punctatus
ENSORLG00015007396	patz1	100	57.872	ENSSTOG00000020707	PATZ1	100	58.017	Ictidomys_tridecemlineatus
ENSORLG00015007396	patz1	100	57.351	ENSJJAG00000015259	Patz1	100	57.496	Jaculus_jaculus
ENSORLG00015007396	patz1	100	77.983	ENSKMAG00000008157	patz1	100	78.298	Kryptolebias_marmoratus
ENSORLG00015007396	patz1	100	57.420	ENSLAFG00000002317	PATZ1	100	57.559	Loxodonta_africana
ENSORLG00015007396	patz1	100	58.297	ENSMFAG00000040968	PATZ1	100	58.443	Macaca_fascicularis
ENSORLG00015007396	patz1	100	58.297	ENSMNEG00000037588	PATZ1	100	58.443	Macaca_nemestrina
ENSORLG00015007396	patz1	100	58.003	ENSMLEG00000030938	PATZ1	100	58.150	Mandrillus_leucophaeus
ENSORLG00015007396	patz1	100	83.333	ENSMAMG00000023652	patz1	100	83.333	Mastacembelus_armatus
ENSORLG00015007396	patz1	89	52.119	ENSMGAG00000008439	PATZ1	100	52.119	Meleagris_gallopavo
ENSORLG00015007396	patz1	100	58.003	ENSMAUG00000004129	Patz1	100	58.003	Mesocricetus_auratus
ENSORLG00015007396	patz1	100	58.150	ENSMICG00000005430	PATZ1	100	58.297	Microcebus_murinus
ENSORLG00015007396	patz1	100	58.003	ENSMOCG00000014488	Patz1	100	58.003	Microtus_ochrogaster
ENSORLG00015007396	patz1	100	73.939	ENSMMOG00000021679	patz1	100	73.939	Mola_mola
ENSORLG00015007396	patz1	100	80.734	ENSMALG00000021172	patz1	100	80.734	Monopterus_albus
ENSORLG00015007396	patz1	100	58.150	MGP_CAROLIEiJ_G0016007	Patz1	100	58.150	Mus_caroli
ENSORLG00015007396	patz1	100	58.297	ENSMUSG00000020453	Patz1	100	58.297	Mus_musculus
ENSORLG00015007396	patz1	100	58.297	MGP_PahariEiJ_G0016884	Patz1	100	58.297	Mus_pahari
ENSORLG00015007396	patz1	100	58.297	MGP_SPRETEiJ_G0016846	Patz1	100	58.297	Mus_spretus
ENSORLG00015007396	patz1	100	57.918	ENSMLUG00000009942	PATZ1	100	58.003	Myotis_lucifugus
ENSORLG00015007396	patz1	100	58.003	ENSNGAG00000010268	Patz1	100	58.003	Nannospalax_galili
ENSORLG00015007396	patz1	100	80.939	ENSNBRG00000016032	patz1	100	80.939	Neolamprologus_brichardi
ENSORLG00015007396	patz1	71	55.400	ENSMEUG00000016293	PATZ1	97	55.400	Notamacropus_eugenii
ENSORLG00015007396	patz1	100	58.003	ENSODEG00000003589	PATZ1	100	58.003	Octodon_degus
ENSORLG00015007396	patz1	100	83.792	ENSONIG00000004248	patz1	100	83.792	Oreochromis_niloticus
ENSORLG00015007396	patz1	100	57.007	ENSOANG00000014654	PATZ1	100	57.143	Ornithorhynchus_anatinus
ENSORLG00015007396	patz1	100	99.144	ENSORLG00020010937	patz1	100	99.144	Oryzias_latipes_hni
ENSORLG00015007396	patz1	100	93.653	ENSOMEG00000006636	patz1	100	93.653	Oryzias_melastigma
ENSORLG00015007396	patz1	100	56.812	ENSOGAG00000027905	PATZ1	100	56.948	Otolemur_garnettii
ENSORLG00015007396	patz1	100	58.003	ENSPPAG00000033227	PATZ1	100	58.150	Pan_paniscus
ENSORLG00015007396	patz1	100	57.856	ENSPPRG00000001573	PATZ1	100	58.003	Panthera_pardus
ENSORLG00015007396	patz1	89	56.309	ENSPTIG00000007937	PATZ1	91	56.426	Panthera_tigris_altaica
ENSORLG00015007396	patz1	100	58.003	ENSPTRG00000014268	PATZ1	100	58.150	Pan_troglodytes
ENSORLG00015007396	patz1	100	58.003	ENSPANG00000006821	PATZ1	100	56.676	Papio_anubis
ENSORLG00015007396	patz1	100	70.175	ENSPKIG00000019584	patz1	100	70.175	Paramormyrops_kingsleyae
ENSORLG00015007396	patz1	63	61.518	ENSPSIG00000011562	-	100	61.518	Pelodiscus_sinensis
ENSORLG00015007396	patz1	56	59.649	ENSPSIG00000016553	-	85	59.649	Pelodiscus_sinensis
ENSORLG00015007396	patz1	100	74.253	ENSPMGG00000010196	patz1	100	74.253	Periophthalmus_magnuspinnatus
ENSORLG00015007396	patz1	100	58.003	ENSPEMG00000005321	Patz1	100	58.003	Peromyscus_maniculatus_bairdii
ENSORLG00015007396	patz1	100	83.742	ENSPLAG00000010425	patz1	100	84.509	Poecilia_latipinna
ENSORLG00015007396	patz1	100	83.871	ENSPMEG00000000255	patz1	100	84.639	Poecilia_mexicana
ENSORLG00015007396	patz1	100	80.540	ENSPREG00000002440	patz1	100	81.250	Poecilia_reticulata
ENSORLG00015007396	patz1	100	56.540	ENSPPYG00000011732	PATZ1	100	56.676	Pongo_abelii
ENSORLG00015007396	patz1	100	58.150	ENSPCOG00000019729	PATZ1	100	58.297	Propithecus_coquereli
ENSORLG00015007396	patz1	100	56.540	ENSPVAG00000001749	PATZ1	100	56.676	Pteropus_vampyrus
ENSORLG00015007396	patz1	100	83.792	ENSPNYG00000013542	patz1	100	83.792	Pundamilia_nyererei
ENSORLG00015007396	patz1	88	63.166	ENSPNAG00000017222	patz1	100	63.166	Pygocentrus_nattereri
ENSORLG00015007396	patz1	100	58.003	ENSRBIG00000044231	PATZ1	100	58.150	Rhinopithecus_bieti
ENSORLG00015007396	patz1	100	58.003	ENSRROG00000037155	PATZ1	100	58.150	Rhinopithecus_roxellana
ENSORLG00015007396	patz1	100	58.003	ENSSBOG00000003894	PATZ1	100	58.150	Saimiri_boliviensis_boliviensis
ENSORLG00015007396	patz1	82	96.154	ENSSFOG00015013244	patz1	78	96.154	Scleropages_formosus
ENSORLG00015007396	patz1	51	97.605	ENSSMAG00000020844	patz1	69	93.636	Scophthalmus_maximus
ENSORLG00015007396	patz1	99	55.798	ENSSPUG00000015298	PATZ1	97	55.935	Sphenodon_punctatus
ENSORLG00015007396	patz1	87	57.639	ENSSSCG00000010027	PATZ1	100	57.812	Sus_scrofa
ENSORLG00015007396	patz1	100	79.374	ENSTRUG00000015366	patz1	100	79.374	Takifugu_rubripes
ENSORLG00015007396	patz1	100	56.403	ENSTTRG00000010279	PATZ1	100	56.540	Tursiops_truncatus
ENSORLG00015007396	patz1	100	57.856	ENSUAMG00000015014	PATZ1	100	58.003	Ursus_americanus
ENSORLG00015007396	patz1	100	55.775	ENSXETG00000004190	patz1	100	56.436	Xenopus_tropicalis
ENSORLG00015007396	patz1	100	84.639	ENSXMAG00000015531	patz1	100	85.407	Xiphophorus_maculatus