EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015007494 (Gene tree)
Gene ID: -
Gene Symbol: trub2
Alias: -
Full Name: TruB pseudouridine (psi) synthase family member 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 5487 bases
Position: chr5:313077-318563
Accession: ZDB-GENE-040704-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006663	TruB_N	PF01509.18	8.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003837	-	2607	-	ENSORLP00015006663	325 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007494's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007494	trub2	86	55.197	ENSG00000167112	TRUB2	84	55.197	Homo_sapiens
ENSORLG00015007494	trub2	99	53.846	ENSAPOG00000018284	-	93	67.429	Acanthochromis_polyacanthus
ENSORLG00015007494	trub2	72	71.784	ENSAPOG00000015733	trub2	87	71.784	Acanthochromis_polyacanthus
ENSORLG00015007494	trub2	90	54.082	ENSAMEG00000015395	TRUB2	89	53.061	Ailuropoda_melanoleuca
ENSORLG00015007494	trub2	87	75.000	ENSACIG00000016500	trub2	98	68.000	Amphilophus_citrinellus
ENSORLG00015007494	trub2	96	70.062	ENSAOCG00000002330	trub2	95	70.062	Amphiprion_ocellaris
ENSORLG00015007494	trub2	94	70.886	ENSAPEG00000013177	trub2	92	71.293	Amphiprion_percula
ENSORLG00015007494	trub2	87	74.035	ENSATEG00000011371	trub2	90	74.035	Anabas_testudineus
ENSORLG00015007494	trub2	88	50.523	ENSAPLG00000009254	TRUB2	94	50.523	Anas_platyrhynchos
ENSORLG00015007494	trub2	84	52.000	ENSACAG00000007331	TRUB2	84	52.000	Anolis_carolinensis
ENSORLG00015007494	trub2	86	56.272	ENSANAG00000036234	TRUB2	90	56.272	Aotus_nancymaae
ENSORLG00015007494	trub2	96	68.308	ENSACLG00000010793	trub2	98	68.000	Astatotilapia_calliptera
ENSORLG00015007494	trub2	93	60.526	ENSAMXG00000031679	trub2	86	59.868	Astyanax_mexicanus
ENSORLG00015007494	trub2	86	55.556	ENSCJAG00000020009	TRUB2	84	55.556	Callithrix_jacchus
ENSORLG00015007494	trub2	90	52.381	ENSCAFG00000020068	TRUB2	98	49.689	Canis_familiaris
ENSORLG00015007494	trub2	53	52.023	ENSCAFG00020017325	-	97	52.023	Canis_lupus_dingo
ENSORLG00015007494	trub2	90	51.701	ENSCHIG00000021160	TRUB2	89	51.701	Capra_hircus
ENSORLG00015007494	trub2	90	53.401	ENSTSYG00000034163	TRUB2	89	53.401	Carlito_syrichta
ENSORLG00015007494	trub2	80	51.515	ENSCAPG00000000223	TRUB2	89	51.515	Cavia_aperea
ENSORLG00015007494	trub2	90	53.199	ENSCPOG00000013535	TRUB2	89	53.199	Cavia_porcellus
ENSORLG00015007494	trub2	86	55.197	ENSCCAG00000026531	-	85	55.197	Cebus_capucinus
ENSORLG00015007494	trub2	85	52.347	ENSCCAG00000028463	-	84	52.347	Cebus_capucinus
ENSORLG00015007494	trub2	86	55.914	ENSCATG00000038234	TRUB2	84	55.914	Cercocebus_atys
ENSORLG00015007494	trub2	90	53.199	ENSCLAG00000001702	TRUB2	91	53.199	Chinchilla_lanigera
ENSORLG00015007494	trub2	86	52.297	ENSCSAG00000014117	TRUB2	84	52.297	Chlorocebus_sabaeus
ENSORLG00015007494	trub2	90	51.877	ENSCHOG00000001555	TRUB2	89	51.877	Choloepus_hoffmanni
ENSORLG00015007494	trub2	94	52.751	ENSCPBG00000025186	TRUB2	89	52.751	Chrysemys_picta_bellii
ENSORLG00015007494	trub2	86	33.099	ENSCSAVG00000003930	-	87	33.099	Ciona_savignyi
ENSORLG00015007494	trub2	86	49.821	ENSCANG00000016135	TRUB2	83	49.821	Colobus_angolensis_palliatus
ENSORLG00015007494	trub2	90	51.014	ENSCGRG00001024441	Trub2	91	49.412	Cricetulus_griseus_chok1gshd
ENSORLG00015007494	trub2	90	51.014	ENSCGRG00000005633	Trub2	89	51.014	Cricetulus_griseus_crigri
ENSORLG00015007494	trub2	98	61.491	ENSCSEG00000001331	trub2	97	61.491	Cynoglossus_semilaevis
ENSORLG00015007494	trub2	94	71.803	ENSCVAG00000009901	trub2	92	71.803	Cyprinodon_variegatus
ENSORLG00015007494	trub2	90	61.905	ENSDARG00000028379	trub2	83	61.224	Danio_rerio
ENSORLG00015007494	trub2	90	51.864	ENSDNOG00000045679	-	89	51.361	Dasypus_novemcinctus
ENSORLG00015007494	trub2	78	36.576	ENSDNOG00000043967	-	75	36.290	Dasypus_novemcinctus
ENSORLG00015007494	trub2	94	50.804	ENSDORG00000016222	Trub2	96	51.316	Dipodomys_ordii
ENSORLG00015007494	trub2	86	32.168	FBgn0033060	CG7849	90	32.168	Drosophila_melanogaster
ENSORLG00015007494	trub2	86	53.047	ENSETEG00000009114	TRUB2	91	51.536	Echinops_telfairi
ENSORLG00015007494	trub2	64	45.312	ENSEBUG00000015723	trub2	77	45.312	Eptatretus_burgeri
ENSORLG00015007494	trub2	90	52.862	ENSEASG00005016819	TRUB2	90	52.862	Equus_asinus_asinus
ENSORLG00015007494	trub2	90	53.199	ENSECAG00000023520	TRUB2	90	53.199	Equus_caballus
ENSORLG00015007494	trub2	86	53.405	ENSEEUG00000008908	TRUB2	85	53.405	Erinaceus_europaeus
ENSORLG00015007494	trub2	89	65.347	ENSELUG00000002376	trub2	95	64.686	Esox_lucius
ENSORLG00015007494	trub2	86	56.228	ENSFCAG00000005839	TRUB2	88	56.228	Felis_catus
ENSORLG00015007494	trub2	86	50.171	ENSFALG00000001364	TRUB2	95	50.171	Ficedula_albicollis
ENSORLG00015007494	trub2	86	53.763	ENSFDAG00000021374	TRUB2	90	51.852	Fukomys_damarensis
ENSORLG00015007494	trub2	94	65.615	ENSFHEG00000014655	trub2	94	65.615	Fundulus_heteroclitus
ENSORLG00015007494	trub2	89	59.170	ENSGMOG00000000981	trub2	97	59.170	Gadus_morhua
ENSORLG00015007494	trub2	88	52.265	ENSGALG00000004920	TRUB2	71	51.546	Gallus_gallus
ENSORLG00015007494	trub2	94	72.468	ENSGAFG00000010107	trub2	94	72.152	Gambusia_affinis
ENSORLG00015007494	trub2	90	74.832	ENSGACG00000001476	trub2	90	74.832	Gasterosteus_aculeatus
ENSORLG00015007494	trub2	97	50.784	ENSGAGG00000022872	TRUB2	93	50.784	Gopherus_agassizii
ENSORLG00015007494	trub2	86	54.839	ENSGGOG00000014780	TRUB2	84	54.839	Gorilla_gorilla
ENSORLG00015007494	trub2	96	68.615	ENSHBUG00000022384	trub2	98	68.308	Haplochromis_burtoni
ENSORLG00015007494	trub2	90	51.701	ENSHGLG00000016715	TRUB2	89	51.701	Heterocephalus_glaber_female
ENSORLG00015007494	trub2	90	51.701	ENSHGLG00100016548	TRUB2	89	51.701	Heterocephalus_glaber_male
ENSORLG00015007494	trub2	99	67.284	ENSHCOG00000017748	trub2	98	67.284	Hippocampus_comes
ENSORLG00015007494	trub2	93	58.306	ENSIPUG00000017725	hdhd3	53	57.980	Ictalurus_punctatus
ENSORLG00015007494	trub2	86	52.518	ENSSTOG00000008024	-	96	48.113	Ictidomys_tridecemlineatus
ENSORLG00015007494	trub2	97	48.750	ENSSTOG00000022617	-	98	48.750	Ictidomys_tridecemlineatus
ENSORLG00015007494	trub2	86	48.029	ENSJJAG00000019181	Trub2	83	48.029	Jaculus_jaculus
ENSORLG00015007494	trub2	90	77.517	ENSKMAG00000007861	trub2	89	76.510	Kryptolebias_marmoratus
ENSORLG00015007494	trub2	90	71.672	ENSLBEG00000000907	trub2	86	71.672	Labrus_bergylta
ENSORLG00015007494	trub2	86	56.028	ENSLACG00000001515	TRUB2	84	54.610	Latimeria_chalumnae
ENSORLG00015007494	trub2	86	59.643	ENSLOCG00000000885	trub2	92	59.574	Lepisosteus_oculatus
ENSORLG00015007494	trub2	90	52.721	ENSLAFG00000002174	TRUB2	97	52.721	Loxodonta_africana
ENSORLG00015007494	trub2	86	55.556	ENSMFAG00000000881	TRUB2	84	55.556	Macaca_fascicularis
ENSORLG00015007494	trub2	86	55.556	ENSMMUG00000014146	TRUB2	98	49.693	Macaca_mulatta
ENSORLG00015007494	trub2	86	55.556	ENSMNEG00000011189	TRUB2	84	55.556	Macaca_nemestrina
ENSORLG00015007494	trub2	86	55.556	ENSMLEG00000037270	TRUB2	84	55.556	Mandrillus_leucophaeus
ENSORLG00015007494	trub2	90	73.064	ENSMAMG00000023643	trub2	98	72.203	Mastacembelus_armatus
ENSORLG00015007494	trub2	96	68.615	ENSMZEG00005016018	trub2	98	68.308	Maylandia_zebra
ENSORLG00015007494	trub2	59	55.440	ENSMGAG00000003894	TRUB2	97	55.440	Meleagris_gallopavo
ENSORLG00015007494	trub2	86	53.405	ENSMAUG00000010403	Trub2	88	50.588	Mesocricetus_auratus
ENSORLG00015007494	trub2	86	54.286	ENSMICG00000047032	TRUB2	89	52.721	Microcebus_murinus
ENSORLG00015007494	trub2	86	53.405	ENSMOCG00000014291	Trub2	92	53.405	Microtus_ochrogaster
ENSORLG00015007494	trub2	96	70.032	ENSMMOG00000021674	trub2	96	70.927	Mola_mola
ENSORLG00015007494	trub2	85	52.158	ENSMODG00000005940	TRUB2	94	51.079	Monodelphis_domestica
ENSORLG00015007494	trub2	97	68.847	ENSMALG00000021231	trub2	95	68.224	Monopterus_albus
ENSORLG00015007494	trub2	86	51.971	MGP_CAROLIEiJ_G0023368	Trub2	88	48.824	Mus_caroli
ENSORLG00015007494	trub2	86	51.971	ENSMUSG00000039826	Trub2	88	48.824	Mus_musculus
ENSORLG00015007494	trub2	86	52.330	MGP_PahariEiJ_G0024826	Trub2	88	49.412	Mus_pahari
ENSORLG00015007494	trub2	86	51.971	MGP_SPRETEiJ_G0024286	Trub2	88	48.824	Mus_spretus
ENSORLG00015007494	trub2	86	53.047	ENSMPUG00000013206	TRUB2	76	51.971	Mustela_putorius_furo
ENSORLG00015007494	trub2	89	53.425	ENSMLUG00000005256	TRUB2	88	53.425	Myotis_lucifugus
ENSORLG00015007494	trub2	90	49.495	ENSNGAG00000018679	Trub2	90	49.495	Nannospalax_galili
ENSORLG00015007494	trub2	96	68.615	ENSNBRG00000016294	trub2	98	67.385	Neolamprologus_brichardi
ENSORLG00015007494	trub2	86	55.197	ENSNLEG00000017556	TRUB2	84	55.197	Nomascus_leucogenys
ENSORLG00015007494	trub2	85	53.430	ENSMEUG00000000484	TRUB2	89	53.430	Notamacropus_eugenii
ENSORLG00015007494	trub2	85	51.439	ENSOPRG00000001981	TRUB2	89	50.000	Ochotona_princeps
ENSORLG00015007494	trub2	90	51.515	ENSODEG00000017292	TRUB2	91	51.515	Octodon_degus
ENSORLG00015007494	trub2	96	68.615	ENSONIG00000004230	trub2	98	68.308	Oreochromis_niloticus
ENSORLG00015007494	trub2	57	49.198	ENSOANG00000029023	-	83	49.198	Ornithorhynchus_anatinus
ENSORLG00015007494	trub2	97	51.090	ENSOCUG00000026296	TRUB2	88	51.090	Oryctolagus_cuniculus
ENSORLG00015007494	trub2	98	97.826	ENSORLG00000020011	trub2	97	97.826	Oryzias_latipes
ENSORLG00015007494	trub2	99	97.523	ENSORLG00020011028	trub2	95	97.523	Oryzias_latipes_hni
ENSORLG00015007494	trub2	98	79.027	ENSOMEG00000006702	trub2	100	78.723	Oryzias_melastigma
ENSORLG00015007494	trub2	62	54.500	ENSOARG00000003785	-	87	52.273	Ovis_aries
ENSORLG00015007494	trub2	90	52.381	ENSOARG00000010579	-	89	52.381	Ovis_aries
ENSORLG00015007494	trub2	86	55.556	ENSPPAG00000043146	TRUB2	84	55.556	Pan_paniscus
ENSORLG00015007494	trub2	86	56.228	ENSPPRG00000006307	TRUB2	88	56.228	Panthera_pardus
ENSORLG00015007494	trub2	86	56.584	ENSPTIG00000012366	TRUB2	88	56.584	Panthera_tigris_altaica
ENSORLG00015007494	trub2	86	55.197	ENSPTRG00000021423	TRUB2	84	55.197	Pan_troglodytes
ENSORLG00015007494	trub2	86	55.197	ENSPTRG00000052151	-	84	55.197	Pan_troglodytes
ENSORLG00015007494	trub2	86	55.556	ENSPANG00000025856	TRUB2	84	55.556	Papio_anubis
ENSORLG00015007494	trub2	90	63.946	ENSPKIG00000019769	trub2	96	63.946	Paramormyrops_kingsleyae
ENSORLG00015007494	trub2	87	50.523	ENSPSIG00000015701	TRUB2	95	50.523	Pelodiscus_sinensis
ENSORLG00015007494	trub2	92	67.550	ENSPMGG00000010206	trub2	95	67.550	Periophthalmus_magnuspinnatus
ENSORLG00015007494	trub2	90	51.178	ENSPEMG00000017893	Trub2	89	51.178	Peromyscus_maniculatus_bairdii
ENSORLG00015007494	trub2	85	53.791	ENSPCIG00000026731	TRUB2	89	53.791	Phascolarctos_cinereus
ENSORLG00015007494	trub2	94	71.698	ENSPFOG00000018018	trub2	84	71.384	Poecilia_formosa
ENSORLG00015007494	trub2	94	71.384	ENSPLAG00000010484	trub2	91	71.069	Poecilia_latipinna
ENSORLG00015007494	trub2	94	71.609	ENSPMEG00000012913	trub2	95	71.160	Poecilia_mexicana
ENSORLG00015007494	trub2	94	70.846	ENSPREG00000002549	trub2	94	70.533	Poecilia_reticulata
ENSORLG00015007494	trub2	86	55.197	ENSPPYG00000019650	TRUB2	86	55.197	Pongo_abelii
ENSORLG00015007494	trub2	89	53.082	ENSPCAG00000015068	TRUB2	89	53.082	Procavia_capensis
ENSORLG00015007494	trub2	90	53.898	ENSPCOG00000017100	TRUB2	89	53.898	Propithecus_coquereli
ENSORLG00015007494	trub2	84	51.812	ENSPVAG00000001224	TRUB2	93	51.812	Pteropus_vampyrus
ENSORLG00015007494	trub2	96	68.615	ENSPNYG00000013666	trub2	98	68.308	Pundamilia_nyererei
ENSORLG00015007494	trub2	94	59.807	ENSPNAG00000017292	trub2	89	59.807	Pygocentrus_nattereri
ENSORLG00015007494	trub2	86	51.971	ENSRNOG00000043189	Trub2	86	51.971	Rattus_norvegicus
ENSORLG00015007494	trub2	86	50.538	ENSRBIG00000006965	TRUB2	83	50.538	Rhinopithecus_bieti
ENSORLG00015007494	trub2	86	55.556	ENSRROG00000042928	TRUB2	84	55.556	Rhinopithecus_roxellana
ENSORLG00015007494	trub2	86	55.197	ENSSBOG00000022439	TRUB2	84	55.197	Saimiri_boliviensis_boliviensis
ENSORLG00015007494	trub2	85	63.177	ENSSFOG00015013391	trub2	89	63.406	Scleropages_formosus
ENSORLG00015007494	trub2	97	71.875	ENSSMAG00000020820	trub2	97	71.875	Scophthalmus_maximus
ENSORLG00015007494	trub2	88	73.448	ENSSDUG00000016928	trub2	97	67.385	Seriola_dumerili
ENSORLG00015007494	trub2	88	72.759	ENSSLDG00000024701	trub2	97	66.769	Seriola_lalandi_dorsalis
ENSORLG00015007494	trub2	97	47.826	ENSSPUG00000015515	TRUB2	96	47.826	Sphenodon_punctatus
ENSORLG00015007494	trub2	96	70.717	ENSSPAG00000017865	trub2	97	70.717	Stegastes_partitus
ENSORLG00015007494	trub2	90	52.721	ENSSSCG00000005645	TRUB2	89	51.331	Sus_scrofa
ENSORLG00015007494	trub2	78	53.543	ENSTGUG00000003704	TRUB2	97	53.543	Taeniopygia_guttata
ENSORLG00015007494	trub2	97	65.517	ENSTRUG00000015499	trub2	96	65.714	Takifugu_rubripes
ENSORLG00015007494	trub2	88	70.000	ENSTNIG00000014721	trub2	99	70.000	Tetraodon_nigroviridis
ENSORLG00015007494	trub2	59	49.741	ENSTBEG00000000586	TRUB2	86	49.741	Tupaia_belangeri
ENSORLG00015007494	trub2	90	51.020	ENSTTRG00000016486	TRUB2	89	51.020	Tursiops_truncatus
ENSORLG00015007494	trub2	90	53.401	ENSUAMG00000020276	TRUB2	86	52.381	Ursus_americanus
ENSORLG00015007494	trub2	90	53.401	ENSUMAG00000022051	TRUB2	86	52.381	Ursus_maritimus
ENSORLG00015007494	trub2	90	40.614	ENSVPAG00000005793	TRUB2	93	40.614	Vicugna_pacos
ENSORLG00015007494	trub2	90	52.381	ENSVVUG00000013451	TRUB2	84	52.381	Vulpes_vulpes
ENSORLG00015007494	trub2	93	52.805	ENSXETG00000003973	trub2	93	52.805	Xenopus_tropicalis
ENSORLG00015007494	trub2	94	71.609	ENSXCOG00000008759	trub2	94	71.293	Xiphophorus_couchianus
ENSORLG00015007494	trub2	94	71.924	ENSXMAG00000015478	trub2	94	71.609	Xiphophorus_maculatus