EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007538 (Gene tree)
Gene ID: -
Gene Symbol: larp1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 48633 bases
Position: chr14:3383279-3431911
Accession: 101161076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006692	La	PF05383.17	1.2e-21	1	1
ENSORLP00015006706	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003787	-	5938	XM_023962692	ENSORLP00015006692	1054 (aa)	XP_023818460	-
ENSORLT00015003768	-	6010	XM_023962691	ENSORLP00015006706	1078 (aa)	XP_023818459	-

Gene Model

Click here to download ENSORLG00015007538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007538	larp1	92	50.982	ENSORLG00015009580	larp1b	89	52.044

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007538	larp1	85	66.489	ENSG00000155506	LARP1	90	80.000	Homo_sapiens
ENSORLG00015007538	larp1	89	87.556	ENSAPOG00000020685	larp1	99	87.556	Acanthochromis_polyacanthus
ENSORLG00015007538	larp1	85	66.773	ENSAMEG00000016673	LARP1	96	66.773	Ailuropoda_melanoleuca
ENSORLG00015007538	larp1	100	75.301	ENSACIG00000012994	larp1	100	74.815	Amphilophus_citrinellus
ENSORLG00015007538	larp1	79	88.757	ENSAOCG00000007792	larp1	100	87.101	Amphiprion_ocellaris
ENSORLG00015007538	larp1	100	86.479	ENSAPEG00000022246	larp1	100	85.258	Amphiprion_percula
ENSORLG00015007538	larp1	97	85.607	ENSATEG00000013523	larp1	100	84.442	Anabas_testudineus
ENSORLG00015007538	larp1	82	71.224	ENSAPLG00000007559	LARP1	99	69.484	Anas_platyrhynchos
ENSORLG00015007538	larp1	89	68.347	ENSACAG00000004071	LARP1	97	71.333	Anolis_carolinensis
ENSORLG00015007538	larp1	85	66.385	ENSANAG00000029949	LARP1	96	65.364	Aotus_nancymaae
ENSORLG00015007538	larp1	100	84.312	ENSACLG00000015256	larp1	100	85.554	Astatotilapia_calliptera
ENSORLG00015007538	larp1	98	75.000	ENSAMXG00000000859	larp1	99	73.868	Astyanax_mexicanus
ENSORLG00015007538	larp1	97	62.212	ENSBTAG00000008443	LARP1	97	62.177	Bos_taurus
ENSORLG00015007538	larp1	97	62.120	ENSCJAG00000004454	LARP1	97	62.015	Callithrix_jacchus
ENSORLG00015007538	larp1	85	66.985	ENSCAFG00000017639	LARP1	96	66.773	Canis_familiaris
ENSORLG00015007538	larp1	79	68.312	ENSCAFG00020023860	LARP1	95	68.088	Canis_lupus_dingo
ENSORLG00015007538	larp1	97	64.146	ENSCHIG00000014414	LARP1	99	61.261	Capra_hircus
ENSORLG00015007538	larp1	86	67.161	ENSTSYG00000013732	LARP1	98	64.828	Carlito_syrichta
ENSORLG00015007538	larp1	78	65.691	ENSCAPG00000013865	LARP1	85	65.100	Cavia_aperea
ENSORLG00015007538	larp1	85	67.234	ENSCPOG00000003377	LARP1	96	66.702	Cavia_porcellus
ENSORLG00015007538	larp1	97	62.028	ENSCCAG00000025201	LARP1	97	61.922	Cebus_capucinus
ENSORLG00015007538	larp1	97	60.982	ENSCATG00000030675	LARP1	97	61.260	Cercocebus_atys
ENSORLG00015007538	larp1	85	67.234	ENSCLAG00000012755	LARP1	96	66.809	Chinchilla_lanigera
ENSORLG00015007538	larp1	79	67.439	ENSCSAG00000010800	LARP1	95	67.207	Chlorocebus_sabaeus
ENSORLG00015007538	larp1	82	66.114	ENSCHOG00000012716	LARP1	88	65.082	Choloepus_hoffmanni
ENSORLG00015007538	larp1	89	70.890	ENSCPBG00000002173	LARP1	93	69.937	Chrysemys_picta_bellii
ENSORLG00015007538	larp1	85	67.093	ENSCANG00000037418	LARP1	90	66.987	Colobus_angolensis_palliatus
ENSORLG00015007538	larp1	99	61.944	ENSCGRG00001016913	Larp1	97	62.628	Cricetulus_griseus_chok1gshd
ENSORLG00015007538	larp1	85	64.813	ENSCGRG00000009916	Larp1	100	64.599	Cricetulus_griseus_crigri
ENSORLG00015007538	larp1	100	82.961	ENSCSEG00000016431	larp1	100	81.827	Cynoglossus_semilaevis
ENSORLG00015007538	larp1	98	85.057	ENSCVAG00000022687	larp1	100	83.641	Cyprinodon_variegatus
ENSORLG00015007538	larp1	99	68.057	ENSDARG00000101722	larp1	95	73.575	Danio_rerio
ENSORLG00015007538	larp1	97	61.878	ENSDNOG00000012073	LARP1	97	61.694	Dasypus_novemcinctus
ENSORLG00015007538	larp1	88	63.533	ENSDORG00000002897	Larp1	96	65.429	Dipodomys_ordii
ENSORLG00015007538	larp1	82	67.037	ENSETEG00000020251	LARP1	100	66.704	Echinops_telfairi
ENSORLG00015007538	larp1	97	61.757	ENSEASG00005001070	LARP1	97	61.822	Equus_asinus_asinus
ENSORLG00015007538	larp1	97	61.757	ENSECAG00000017002	LARP1	78	61.905	Equus_caballus
ENSORLG00015007538	larp1	83	64.956	ENSEEUG00000001065	LARP1	96	65.284	Erinaceus_europaeus
ENSORLG00015007538	larp1	99	74.404	ENSELUG00000019403	larp1	99	73.684	Esox_lucius
ENSORLG00015007538	larp1	97	61.962	ENSFCAG00000000592	LARP1	97	62.224	Felis_catus
ENSORLG00015007538	larp1	78	73.325	ENSFALG00000008335	LARP1	99	72.857	Ficedula_albicollis
ENSORLG00015007538	larp1	85	67.306	ENSFDAG00000021125	LARP1	96	66.774	Fukomys_damarensis
ENSORLG00015007538	larp1	63	74.963	ENSFHEG00000020307	larp1	97	76.686	Fundulus_heteroclitus
ENSORLG00015007538	larp1	99	67.072	ENSGALG00000040109	LARP1	97	71.266	Gallus_gallus
ENSORLG00015007538	larp1	97	66.698	ENSGAGG00000025113	LARP1	97	70.222	Gopherus_agassizii
ENSORLG00015007538	larp1	85	66.383	ENSGGOG00000006048	LARP1	90	66.489	Gorilla_gorilla
ENSORLG00015007538	larp1	100	84.700	ENSHBUG00000020762	larp1	100	85.992	Haplochromis_burtoni
ENSORLG00015007538	larp1	97	61.980	ENSHGLG00000006267	LARP1	97	61.132	Heterocephalus_glaber_female
ENSORLG00015007538	larp1	88	57.922	ENSHGLG00100003395	-	88	57.563	Heterocephalus_glaber_male
ENSORLG00015007538	larp1	85	66.915	ENSHGLG00100014230	-	96	66.596	Heterocephalus_glaber_male
ENSORLG00015007538	larp1	87	91.560	ENSHCOG00000010786	larp1	98	88.753	Hippocampus_comes
ENSORLG00015007538	larp1	91	77.066	ENSIPUG00000019105	Larp1	96	76.963	Ictalurus_punctatus
ENSORLG00015007538	larp1	85	66.524	ENSSTOG00000005678	LARP1	95	66.096	Ictidomys_tridecemlineatus
ENSORLG00015007538	larp1	97	59.849	ENSJJAG00000016950	Larp1	97	59.311	Jaculus_jaculus
ENSORLG00015007538	larp1	100	83.985	ENSKMAG00000018468	larp1	99	85.773	Kryptolebias_marmoratus
ENSORLG00015007538	larp1	99	81.569	ENSLBEG00000027172	larp1	100	80.378	Labrus_bergylta
ENSORLG00015007538	larp1	94	75.697	ENSLOCG00000012457	larp1	99	73.669	Lepisosteus_oculatus
ENSORLG00015007538	larp1	97	62.208	ENSLAFG00000008991	LARP1	97	61.781	Loxodonta_africana
ENSORLG00015007538	larp1	85	66.560	ENSMFAG00000031651	LARP1	90	66.453	Macaca_fascicularis
ENSORLG00015007538	larp1	85	65.773	ENSMMUG00000009411	LARP1	96	65.773	Macaca_mulatta
ENSORLG00015007538	larp1	81	67.042	ENSMNEG00000039294	LARP1	95	67.746	Macaca_nemestrina
ENSORLG00015007538	larp1	85	66.773	ENSMLEG00000035142	LARP1	90	66.667	Mandrillus_leucophaeus
ENSORLG00015007538	larp1	100	84.995	ENSMAMG00000021788	larp1	100	83.715	Mastacembelus_armatus
ENSORLG00015007538	larp1	100	84.312	ENSMZEG00005009345	larp1	100	85.554	Maylandia_zebra
ENSORLG00015007538	larp1	87	70.588	ENSMGAG00000005696	LARP1	99	70.964	Meleagris_gallopavo
ENSORLG00015007538	larp1	99	62.056	ENSMAUG00000001385	Larp1	99	61.861	Mesocricetus_auratus
ENSORLG00015007538	larp1	85	67.663	ENSMICG00000000837	LARP1	95	67.820	Microcebus_murinus
ENSORLG00015007538	larp1	99	62.147	ENSMOCG00000008920	Larp1	99	61.770	Microtus_ochrogaster
ENSORLG00015007538	larp1	95	62.917	ENSMMOG00000013364	larp1	99	63.298	Mola_mola
ENSORLG00015007538	larp1	87	67.601	ENSMODG00000008663	LARP1	98	65.940	Monodelphis_domestica
ENSORLG00015007538	larp1	100	83.379	ENSMALG00000017180	larp1	100	82.009	Monopterus_albus
ENSORLG00015007538	larp1	99	62.056	MGP_CAROLIEiJ_G0016383	Larp1	99	62.009	Mus_caroli
ENSORLG00015007538	larp1	99	62.056	ENSMUSG00000037331	Larp1	99	62.100	Mus_musculus
ENSORLG00015007538	larp1	99	62.000	MGP_PahariEiJ_G0017518	Larp1	99	61.953	Mus_pahari
ENSORLG00015007538	larp1	99	62.147	MGP_SPRETEiJ_G0017225	Larp1	99	61.685	Mus_spretus
ENSORLG00015007538	larp1	82	58.747	ENSMPUG00000013564	LARP1	99	58.505	Mustela_putorius_furo
ENSORLG00015007538	larp1	87	62.282	ENSMLUG00000002608	LARP1	99	62.474	Myotis_lucifugus
ENSORLG00015007538	larp1	85	66.064	ENSNGAG00000001098	Larp1	96	65.957	Nannospalax_galili
ENSORLG00015007538	larp1	91	84.324	ENSNBRG00000008963	larp1	97	83.197	Neolamprologus_brichardi
ENSORLG00015007538	larp1	85	67.384	ENSNLEG00000016588	LARP1	95	66.413	Nomascus_leucogenys
ENSORLG00015007538	larp1	87	62.447	ENSMEUG00000002957	LARP1	99	62.591	Notamacropus_eugenii
ENSORLG00015007538	larp1	85	67.128	ENSOPRG00000013014	LARP1	96	66.809	Ochotona_princeps
ENSORLG00015007538	larp1	86	66.247	ENSODEG00000010824	LARP1	96	66.382	Octodon_degus
ENSORLG00015007538	larp1	99	80.909	ENSONIG00000017308	larp1	100	79.727	Oreochromis_niloticus
ENSORLG00015007538	larp1	88	69.413	ENSOANG00000005096	LARP1	98	67.389	Ornithorhynchus_anatinus
ENSORLG00015007538	larp1	97	62.953	ENSOCUG00000013066	LARP1	97	62.396	Oryctolagus_cuniculus
ENSORLG00015007538	larp1	100	99.077	ENSORLG00000000824	larp1	100	99.077	Oryzias_latipes
ENSORLG00015007538	larp1	100	98.983	ENSORLG00020022241	larp1	100	98.983	Oryzias_latipes_hni
ENSORLG00015007538	larp1	100	94.815	ENSOMEG00000003134	larp1	100	94.625	Oryzias_melastigma
ENSORLG00015007538	larp1	87	65.460	ENSOGAG00000016750	LARP1	99	65.145	Otolemur_garnettii
ENSORLG00015007538	larp1	85	67.094	ENSOARG00000009893	LARP1	99	65.570	Ovis_aries
ENSORLG00015007538	larp1	85	66.383	ENSPPAG00000042993	LARP1	90	66.489	Pan_paniscus
ENSORLG00015007538	larp1	85	67.021	ENSPPRG00000009780	LARP1	91	66.596	Panthera_pardus
ENSORLG00015007538	larp1	85	67.306	ENSPTIG00000007013	LARP1	91	67.519	Panthera_tigris_altaica
ENSORLG00015007538	larp1	97	60.926	ENSPTRG00000017447	LARP1	97	61.204	Pan_troglodytes
ENSORLG00015007538	larp1	97	60.982	ENSPANG00000008080	LARP1	97	61.260	Papio_anubis
ENSORLG00015007538	larp1	99	74.140	ENSPKIG00000010096	larp1	99	73.116	Paramormyrops_kingsleyae
ENSORLG00015007538	larp1	99	66.048	ENSPKIG00000017153	-	99	65.723	Paramormyrops_kingsleyae
ENSORLG00015007538	larp1	95	77.313	ENSPMGG00000011599	larp1	97	78.607	Periophthalmus_magnuspinnatus
ENSORLG00015007538	larp1	87	64.901	ENSPEMG00000022523	Larp1	98	64.901	Peromyscus_maniculatus_bairdii
ENSORLG00015007538	larp1	97	64.711	ENSPCIG00000019242	LARP1	90	63.035	Phascolarctos_cinereus
ENSORLG00015007538	larp1	100	81.562	ENSPFOG00000005836	larp1	100	80.291	Poecilia_formosa
ENSORLG00015007538	larp1	100	80.762	ENSPLAG00000008936	larp1	100	82.063	Poecilia_latipinna
ENSORLG00015007538	larp1	100	81.471	ENSPMEG00000013656	larp1	100	80.200	Poecilia_mexicana
ENSORLG00015007538	larp1	89	84.584	ENSPREG00000005726	larp1	99	83.145	Poecilia_reticulata
ENSORLG00015007538	larp1	85	64.574	ENSPCAG00000006407	LARP1	97	64.461	Procavia_capensis
ENSORLG00015007538	larp1	85	59.681	ENSPCOG00000016949	LARP1	96	61.686	Propithecus_coquereli
ENSORLG00015007538	larp1	97	62.202	ENSPVAG00000002262	LARP1	97	61.651	Pteropus_vampyrus
ENSORLG00015007538	larp1	100	84.404	ENSPNYG00000007938	larp1	100	85.656	Pundamilia_nyererei
ENSORLG00015007538	larp1	99	73.749	ENSPNAG00000021427	larp1	99	74.166	Pygocentrus_nattereri
ENSORLG00015007538	larp1	87	65.349	ENSRNOG00000031544	Larp1	98	65.349	Rattus_norvegicus
ENSORLG00015007538	larp1	85	66.773	ENSRBIG00000038005	LARP1	90	66.667	Rhinopithecus_bieti
ENSORLG00015007538	larp1	85	66.773	ENSRROG00000034073	LARP1	95	67.977	Rhinopithecus_roxellana
ENSORLG00015007538	larp1	85	66.525	ENSSBOG00000019816	LARP1	96	65.882	Saimiri_boliviensis_boliviensis
ENSORLG00015007538	larp1	87	68.652	ENSSHAG00000011115	LARP1	99	66.876	Sarcophilus_harrisii
ENSORLG00015007538	larp1	86	77.825	ENSSFOG00015020304	larp1	95	74.265	Scleropages_formosus
ENSORLG00015007538	larp1	99	73.029	ENSSFOG00015018058	-	99	71.700	Scleropages_formosus
ENSORLG00015007538	larp1	94	83.086	ENSSMAG00000007468	larp1	98	83.086	Scophthalmus_maximus
ENSORLG00015007538	larp1	100	85.405	ENSSDUG00000000268	larp1	100	84.324	Seriola_dumerili
ENSORLG00015007538	larp1	83	81.257	ENSSLDG00000016505	larp1	99	81.257	Seriola_lalandi_dorsalis
ENSORLG00015007538	larp1	55	82.731	ENSSARG00000013907	-	88	76.786	Sorex_araneus
ENSORLG00015007538	larp1	99	63.059	ENSSPUG00000012179	-	99	63.369	Sphenodon_punctatus
ENSORLG00015007538	larp1	100	85.727	ENSSPAG00000003910	larp1	100	84.608	Stegastes_partitus
ENSORLG00015007538	larp1	97	61.595	ENSSSCG00000017069	LARP1	97	66.705	Sus_scrofa
ENSORLG00015007538	larp1	85	70.999	ENSTGUG00000000704	LARP1	100	68.326	Taeniopygia_guttata
ENSORLG00015007538	larp1	99	81.793	ENSTRUG00000009470	larp1	99	80.499	Takifugu_rubripes
ENSORLG00015007538	larp1	82	65.414	ENSTBEG00000003381	LARP1	99	64.856	Tupaia_belangeri
ENSORLG00015007538	larp1	87	64.700	ENSTTRG00000015934	LARP1	99	64.857	Tursiops_truncatus
ENSORLG00015007538	larp1	97	62.075	ENSUAMG00000019334	LARP1	97	62.063	Ursus_americanus
ENSORLG00015007538	larp1	85	66.667	ENSUMAG00000002934	LARP1	96	68.100	Ursus_maritimus
ENSORLG00015007538	larp1	79	68.312	ENSVVUG00000004644	LARP1	95	68.088	Vulpes_vulpes
ENSORLG00015007538	larp1	94	67.030	ENSXETG00000008413	larp1	97	66.964	Xenopus_tropicalis
ENSORLG00015007538	larp1	88	80.233	ENSXCOG00000004022	larp1	99	81.398	Xiphophorus_couchianus
ENSORLG00015007538	larp1	100	81.364	ENSXMAG00000018780	larp1	100	80.273	Xiphophorus_maculatus