EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007566 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: -
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 5522 bases
Position: chr11:10013697-10019218
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006608	RRM_1	PF00076.22	1.9e-32	1	2
ENSORLP00015006608	RRM_1	PF00076.22	1.9e-32	2	2
ENSORLP00015006636	RRM_1	PF00076.22	5.8e-32	1	2
ENSORLP00015006636	RRM_1	PF00076.22	5.8e-32	2	2
ENSORLP00015006660	RRM_1	PF00076.22	5.9e-23	1	2
ENSORLP00015006660	RRM_1	PF00076.22	5.9e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003879	-	1092	-	ENSORLP00015006636	363 (aa)	-	-
ENSORLT00015003901	-	858	-	ENSORLP00015006660	285 (aa)	-	-
ENSORLT00015003939	-	759	-	ENSORLP00015006608	252 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007566	srsf4	69	64.641	ENSORLG00015023075	srsf5	94	54.167
ENSORLG00015007566	srsf4	98	35.714	ENSORLG00015014384	srsf1a	92	34.375
ENSORLG00015007566	srsf4	68	60.989	ENSORLG00015001720	srsf5b	62	60.989
ENSORLG00015007566	srsf4	69	44.865	ENSORLG00015004857	srsf9	73	42.162
ENSORLG00015007566	srsf4	97	36.398	ENSORLG00015015497	-	71	46.154

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007566	srsf4	85	95.588	ENSAPOG00000020244	srsf4	87	78.154	Acanthochromis_polyacanthus
ENSORLG00015007566	srsf4	70	78.771	ENSAPOG00000023399	-	60	71.910	Acanthochromis_polyacanthus
ENSORLG00015007566	srsf4	71	87.151	ENSAMEG00000000594	SRSF4	50	85.507	Ailuropoda_melanoleuca
ENSORLG00015007566	srsf4	71	93.855	ENSACIG00000018649	srsf4	90	96.694	Amphilophus_citrinellus
ENSORLG00015007566	srsf4	64	96.296	ENSAOCG00000005997	srsf4	92	96.296	Amphiprion_ocellaris
ENSORLG00015007566	srsf4	65	70.902	ENSAPEG00000020826	srsf4	81	73.016	Amphiprion_percula
ENSORLG00015007566	srsf4	70	92.308	ENSATEG00000005680	srsf4	88	73.962	Anabas_testudineus
ENSORLG00015007566	srsf4	70	77.473	ENSACLG00000021269	-	51	76.374	Astatotilapia_calliptera
ENSORLG00015007566	srsf4	81	95.588	ENSACLG00000003395	srsf4	89	85.408	Astatotilapia_calliptera
ENSORLG00015007566	srsf4	71	90.503	ENSAMXG00000034811	srsf4	98	71.223	Astyanax_mexicanus
ENSORLG00015007566	srsf4	69	51.759	WBGene00004698	rsp-1	97	49.306	Caenorhabditis_elegans
ENSORLG00015007566	srsf4	56	83.916	ENSCHOG00000013858	SRSF4	62	53.873	Choloepus_hoffmanni
ENSORLG00015007566	srsf4	69	55.440	ENSCING00000024718	-	56	54.404	Ciona_intestinalis
ENSORLG00015007566	srsf4	70	59.278	ENSCING00000020631	-	99	55.000	Ciona_intestinalis
ENSORLG00015007566	srsf4	69	63.636	ENSCING00000012370	-	68	60.302	Ciona_intestinalis
ENSORLG00015007566	srsf4	69	59.140	ENSCING00000011362	-	65	56.522	Ciona_intestinalis
ENSORLG00015007566	srsf4	69	66.667	ENSCSAVG00000002581	-	94	54.118	Ciona_savignyi
ENSORLG00015007566	srsf4	68	94.203	ENSCSEG00000010058	srsf4	85	95.588	Cynoglossus_semilaevis
ENSORLG00015007566	srsf4	86	57.977	ENSCVAG00000004342	srsf4	85	55.556	Cyprinodon_variegatus
ENSORLG00015007566	srsf4	98	89.706	ENSDARG00000105293	srsf4	78	88.406	Danio_rerio
ENSORLG00015007566	srsf4	60	55.794	FBgn0004587	B52	95	58.594	Drosophila_melanogaster
ENSORLG00015007566	srsf4	77	58.081	ENSEBUG00000001681	srsf4	67	60.335	Eptatretus_burgeri
ENSORLG00015007566	srsf4	62	60.377	ENSEBUG00000003129	srsf4	69	60.256	Eptatretus_burgeri
ENSORLG00015007566	srsf4	100	62.914	ENSELUG00000017551	srsf4	93	73.846	Esox_lucius
ENSORLG00015007566	srsf4	70	87.079	ENSFCAG00000027821	SRSF4	55	85.507	Felis_catus
ENSORLG00015007566	srsf4	86	95.588	ENSFHEG00000007472	srsf4	88	98.780	Fundulus_heteroclitus
ENSORLG00015007566	srsf4	71	88.764	ENSGMOG00000012906	srsf4	57	88.333	Gadus_morhua
ENSORLG00015007566	srsf4	91	95.588	ENSGAFG00000018496	srsf4	92	95.588	Gambusia_affinis
ENSORLG00015007566	srsf4	71	93.889	ENSGACG00000002389	srsf4	81	78.161	Gasterosteus_aculeatus
ENSORLG00015007566	srsf4	70	77.473	ENSHBUG00000011326	-	51	76.374	Haplochromis_burtoni
ENSORLG00015007566	srsf4	70	87.079	ENSHGLG00000011842	SRSF4	52	85.507	Heterocephalus_glaber_female
ENSORLG00015007566	srsf4	70	87.079	ENSHGLG00100017279	SRSF4	52	85.507	Heterocephalus_glaber_male
ENSORLG00015007566	srsf4	83	94.118	ENSHCOG00000012540	srsf4	89	98.485	Hippocampus_comes
ENSORLG00015007566	srsf4	85	95.588	ENSKMAG00000013631	srsf4	88	73.494	Kryptolebias_marmoratus
ENSORLG00015007566	srsf4	69	76.796	ENSLOCG00000001442	-	50	75.956	Lepisosteus_oculatus
ENSORLG00015007566	srsf4	70	87.079	ENSLAFG00000002575	SRSF4	58	66.797	Loxodonta_africana
ENSORLG00015007566	srsf4	85	95.588	ENSMAMG00000004888	srsf4	83	95.588	Mastacembelus_armatus
ENSORLG00015007566	srsf4	81	95.588	ENSMZEG00005026275	srsf4	89	85.408	Maylandia_zebra
ENSORLG00015007566	srsf4	81	95.588	ENSMMOG00000013653	srsf4	77	95.588	Mola_mola
ENSORLG00015007566	srsf4	90	86.765	ENSMODG00000011052	SRSF4	56	84.444	Monodelphis_domestica
ENSORLG00015007566	srsf4	96	94.118	ENSMALG00000013392	srsf4	78	92.754	Monopterus_albus
ENSORLG00015007566	srsf4	70	71.508	ENSNLEG00000030787	-	96	54.212	Nomascus_leucogenys
ENSORLG00015007566	srsf4	71	92.179	ENSONIG00000013730	srsf4	65	94.203	Oreochromis_niloticus
ENSORLG00015007566	srsf4	70	80.859	ENSORLG00000009430	-	94	83.929	Oryzias_latipes
ENSORLG00015007566	srsf4	71	100.000	ENSORLG00020016052	srsf4	91	86.400	Oryzias_latipes_hni
ENSORLG00015007566	srsf4	91	95.588	ENSOMEG00000005541	srsf4	93	90.265	Oryzias_melastigma
ENSORLG00015007566	srsf4	70	87.079	ENSPPRG00000016248	SRSF4	55	85.507	Panthera_pardus
ENSORLG00015007566	srsf4	71	87.958	ENSPMGG00000013436	srsf4	95	81.102	Periophthalmus_magnuspinnatus
ENSORLG00015007566	srsf4	69	66.298	ENSPMAG00000009397	srsf4	68	65.934	Petromyzon_marinus
ENSORLG00015007566	srsf4	91	95.588	ENSPFOG00000001306	srsf4	94	72.254	Poecilia_formosa
ENSORLG00015007566	srsf4	85	95.588	ENSPLAG00000008812	srsf4	85	95.652	Poecilia_latipinna
ENSORLG00015007566	srsf4	93	95.588	ENSPMEG00000023638	srsf4	94	95.652	Poecilia_mexicana
ENSORLG00015007566	srsf4	93	95.588	ENSPREG00000009639	srsf4	94	95.652	Poecilia_reticulata
ENSORLG00015007566	srsf4	71	87.151	ENSPCAG00000009879	SRSF4	51	70.980	Procavia_capensis
ENSORLG00015007566	srsf4	83	74.502	ENSPNYG00000003796	srsf4	66	86.574	Pundamilia_nyererei
ENSORLG00015007566	srsf4	69	92.000	ENSPNAG00000023844	srsf4	54	88.333	Pygocentrus_nattereri
ENSORLG00015007566	srsf4	58	85.034	ENSSHAG00000012407	SRSF4	51	81.208	Sarcophilus_harrisii
ENSORLG00015007566	srsf4	70	92.045	ENSSFOG00015020292	srsf4	72	97.403	Scleropages_formosus
ENSORLG00015007566	srsf4	71	94.086	ENSSMAG00000001707	srsf4	58	82.569	Scophthalmus_maximus
ENSORLG00015007566	srsf4	85	95.588	ENSSDUG00000007387	srsf4	64	94.203	Seriola_dumerili
ENSORLG00015007566	srsf4	71	78.212	ENSSLDG00000009745	srsf4	88	64.000	Seriola_lalandi_dorsalis
ENSORLG00015007566	srsf4	87	95.588	ENSSPAG00000014538	srsf4	90	95.588	Stegastes_partitus
ENSORLG00015007566	srsf4	99	73.962	ENSTRUG00000011891	srsf4	88	75.074	Takifugu_rubripes
ENSORLG00015007566	srsf4	71	95.000	ENSTNIG00000005573	srsf4	73	92.754	Tetraodon_nigroviridis
ENSORLG00015007566	srsf4	75	94.211	ENSTNIG00000000115	-	64	92.754	Tetraodon_nigroviridis
ENSORLG00015007566	srsf4	71	87.151	ENSUAMG00000006106	SRSF4	50	85.507	Ursus_americanus
ENSORLG00015007566	srsf4	93	95.588	ENSXCOG00000018826	srsf4	89	93.220	Xiphophorus_couchianus
ENSORLG00015007566	srsf4	70	72.340	ENSXCOG00000003212	-	55	71.809	Xiphophorus_couchianus