EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015007718 (Gene tree)
Gene ID
-
Gene Symbol
puf60b
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Plus strand
Length
6741 bases
Position
chr20:22431877-22438617
Accession
101163935
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015006870RRM_1PF00076.221.7e-4312
ENSORLP00015006870RRM_1PF00076.221.7e-4322
ENSORLP00015006877RRM_1PF00076.221.9e-4312
ENSORLP00015006877RRM_1PF00076.221.9e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015003465-2116XM_023950246ENSORLP00015006877528 (aa)XP_023806014-
ENSORLT00015003478-2199-ENSORLP00015006870515 (aa)--
Gene Model
Click here to download ENSORLG00015007718's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007718's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015007718puf60b5637.255ENSORLG00015012843u2af2a6339.216
ENSORLG00015007718puf60b9982.364ENSORLG00015016833-9981.474
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015007718puf60b10084.704ENSG00000179950PUF6010084.321Homo_sapiens
ENSORLG00015007718puf60b10096.699ENSAPOG00000001713puf60b10096.402Acanthochromis_polyacanthus
ENSORLG00015007718puf60b10082.792ENSAMEG00000006406PUF609381.664Ailuropoda_melanoleuca
ENSORLG00015007718puf60b10096.699ENSACIG00000021705puf60b10096.699Amphilophus_citrinellus
ENSORLG00015007718puf60b10078.101ENSACIG00000003263-9978.337Amphilophus_citrinellus
ENSORLG00015007718puf60b10096.699ENSAOCG00000005395puf60b10096.699Amphiprion_ocellaris
ENSORLG00015007718puf60b10083.915ENSAOCG00000015558-10083.743Amphiprion_ocellaris
ENSORLG00015007718puf60b10091.068ENSAPEG00000011923puf60b10089.394Amphiprion_percula
ENSORLG00015007718puf60b10074.517ENSAPEG00000001836-9975.915Amphiprion_percula
ENSORLG00015007718puf60b10097.087ENSATEG00000001730puf60b10096.402Anabas_testudineus
ENSORLG00015007718puf60b10082.364ENSATEG00000006303-10081.664Anabas_testudineus
ENSORLG00015007718puf60b10085.086ENSAPLG00000010150PUF6010084.688Anas_platyrhynchos
ENSORLG00015007718puf60b10084.030ENSACAG00000001645PUF609783.962Anolis_carolinensis
ENSORLG00015007718puf60b10084.512ENSANAG00000018626PUF6010084.130Aotus_nancymaae
ENSORLG00015007718puf60b10096.699ENSACLG00000004462puf60b10096.699Astatotilapia_calliptera
ENSORLG00015007718puf60b10086.286ENSAMXG00000036570puf60a10083.456Astyanax_mexicanus
ENSORLG00015007718puf60b10080.835ENSAMXG00000041030puf60b10081.025Astyanax_mexicanus
ENSORLG00015007718puf60b10085.086ENSBTAG00000037493PUF609984.121Bos_taurus
ENSORLG00015007718puf60b8150.667WBGene00004389rnp-68352.303Caenorhabditis_elegans
ENSORLG00015007718puf60b10084.704ENSCJAG00000021485PUF609883.743Callithrix_jacchus
ENSORLG00015007718puf60b10084.512ENSCAFG00000001400PUF609383.554Canis_familiaris
ENSORLG00015007718puf60b10084.895ENSCAFG00020018754PUF609883.932Canis_lupus_dingo
ENSORLG00015007718puf60b10085.086ENSCHIG00000001618PUF608784.121Capra_hircus
ENSORLG00015007718puf60b10084.895ENSTSYG00000011912PUF6010084.512Carlito_syrichta
ENSORLG00015007718puf60b10080.076ENSCPOG00000014613PUF609479.174Cavia_porcellus
ENSORLG00015007718puf60b10084.512ENSCCAG00000007744PUF609883.932Cebus_capucinus
ENSORLG00015007718puf60b10084.704ENSCATG00000035405PUF609883.743Cercocebus_atys
ENSORLG00015007718puf60b10084.895ENSCLAG00000009154PUF609383.932Chinchilla_lanigera
ENSORLG00015007718puf60b10084.704ENSCSAG00000008878PUF6010084.321Chlorocebus_sabaeus
ENSORLG00015007718puf60b10084.895ENSCPBG00000005595PUF609983.895Chrysemys_picta_bellii
ENSORLG00015007718puf60b6358.876ENSCING00000002156-8758.876Ciona_intestinalis
ENSORLG00015007718puf60b9947.378ENSCING00000008436-9947.378Ciona_intestinalis
ENSORLG00015007718puf60b9748.008ENSCSAVG00000004765-9748.008Ciona_savignyi
ENSORLG00015007718puf60b9753.950ENSCSAVG00000001385-9953.950Ciona_savignyi
ENSORLG00015007718puf60b8183.962ENSCANG00000041843PUF6010083.491Colobus_angolensis_palliatus
ENSORLG00015007718puf60b10085.086ENSCGRG00001017442Puf609384.121Cricetulus_griseus_chok1gshd
ENSORLG00015007718puf60b10085.086ENSCGRG00000003717Puf609384.121Cricetulus_griseus_crigri
ENSORLG00015007718puf60b10077.071ENSCSEG00000014845-9176.471Cynoglossus_semilaevis
ENSORLG00015007718puf60b10096.893ENSCSEG00000019887puf60b9496.395Cynoglossus_semilaevis
ENSORLG00015007718puf60b10097.087ENSCVAG00000009386puf60b10097.087Cyprinodon_variegatus
ENSORLG00015007718puf60b9182.128ENSCVAG00000001560-9882.128Cyprinodon_variegatus
ENSORLG00015007718puf60b10081.784ENSDARG00000001241puf60b9998.413Danio_rerio
ENSORLG00015007718puf60b10086.717ENSDARG00000032175puf60a9991.925Danio_rerio
ENSORLG00015007718puf60b9970.349ENSDNOG00000043278PUF609069.961Dasypus_novemcinctus
ENSORLG00015007718puf60b10085.086ENSDORG00000004585Puf609584.121Dipodomys_ordii
ENSORLG00015007718puf60b9749.050FBgn0028577hfp9949.110Drosophila_melanogaster
ENSORLG00015007718puf60b9770.040ENSEBUG00000005470-8869.841Eptatretus_burgeri
ENSORLG00015007718puf60b10059.259ENSEBUG00000014291puf60b8461.929Eptatretus_burgeri
ENSORLG00015007718puf60b10084.895ENSEASG00005009695PUF609883.932Equus_asinus_asinus
ENSORLG00015007718puf60b10084.895ENSECAG00000024681PUF609883.804Equus_caballus
ENSORLG00015007718puf60b10087.452ENSELUG00000006507puf60b10085.817Esox_lucius
ENSORLG00015007718puf60b10088.201ENSELUG00000018443-10087.547Esox_lucius
ENSORLG00015007718puf60b10084.895ENSFCAG00000001045PUF6010084.512Felis_catus
ENSORLG00015007718puf60b10076.291ENSFALG00000001136PUF609876.560Ficedula_albicollis
ENSORLG00015007718puf60b10084.704ENSFDAG00000017177PUF609383.932Fukomys_damarensis
ENSORLG00015007718puf60b10097.864ENSFHEG00000020046puf60b10097.864Fundulus_heteroclitus
ENSORLG00015007718puf60b9683.367ENSFHEG00000021687PUF6010084.298Fundulus_heteroclitus
ENSORLG00015007718puf60b10081.274ENSGMOG00000006392puf60b10081.749Gadus_morhua
ENSORLG00015007718puf60b6588.921ENSGALG00000039901PUF609488.921Gallus_gallus
ENSORLG00015007718puf60b10098.252ENSGAFG00000021040puf60b10098.252Gambusia_affinis
ENSORLG00015007718puf60b10080.658ENSGAFG00000004334-9980.368Gambusia_affinis
ENSORLG00015007718puf60b10083.495ENSGACG00000004717puf60b9882.917Gasterosteus_aculeatus
ENSORLG00015007718puf60b10072.093ENSGACG00000001484-10071.512Gasterosteus_aculeatus
ENSORLG00015007718puf60b10084.895ENSGAGG00000013289PUF609383.895Gopherus_agassizii
ENSORLG00015007718puf60b10084.704ENSGGOG00000004646PUF609883.743Gorilla_gorilla
ENSORLG00015007718puf60b10096.699ENSHBUG00000015118puf60b10096.699Haplochromis_burtoni
ENSORLG00015007718puf60b10083.721ENSHBUG00000009634-10082.987Haplochromis_burtoni
ENSORLG00015007718puf60b10084.704ENSHGLG00000006111PUF609383.932Heterocephalus_glaber_female
ENSORLG00015007718puf60b10084.704ENSHGLG00100012362PUF609383.932Heterocephalus_glaber_male
ENSORLG00015007718puf60b10091.917ENSHCOG00000015541puf60b10092.509Hippocampus_comes
ENSORLG00015007718puf60b9868.307ENSHCOG00000000378-9966.290Hippocampus_comes
ENSORLG00015007718puf60b10085.605ENSIPUG00000002453puf60a9985.605Ictalurus_punctatus
ENSORLG00015007718puf60b10082.386ENSIPUG00000004660puf60b9982.197Ictalurus_punctatus
ENSORLG00015007718puf60b10084.895ENSSTOG00000025037PUF609483.932Ictidomys_tridecemlineatus
ENSORLG00015007718puf60b10085.086ENSJJAG00000001076Puf609384.121Jaculus_jaculus
ENSORLG00015007718puf60b10097.476ENSKMAG00000016745puf60b10097.476Kryptolebias_marmoratus
ENSORLG00015007718puf60b10078.161ENSKMAG00000010106-10078.161Kryptolebias_marmoratus
ENSORLG00015007718puf60b10092.427ENSLBEG00000012505puf60b10092.233Labrus_bergylta
ENSORLG00015007718puf60b7079.891ENSLACG00000005456PUF609979.620Latimeria_chalumnae
ENSORLG00015007718puf60b10088.781ENSLOCG00000010106puf60b10087.925Lepisosteus_oculatus
ENSORLG00015007718puf60b10083.748ENSLAFG00000022929PUF609482.987Loxodonta_africana
ENSORLG00015007718puf60b10084.704ENSMFAG00000043373PUF609884.321Macaca_fascicularis
ENSORLG00015007718puf60b10084.704ENSMMUG00000013558PUF609883.743Macaca_mulatta
ENSORLG00015007718puf60b10084.704ENSMNEG00000031099PUF609883.743Macaca_nemestrina
ENSORLG00015007718puf60b10084.704ENSMLEG00000040009PUF6010084.321Mandrillus_leucophaeus
ENSORLG00015007718puf60b10083.172ENSMAMG00000019476-10082.642Mastacembelus_armatus
ENSORLG00015007718puf60b10095.340ENSMAMG00000010394puf60b10092.439Mastacembelus_armatus
ENSORLG00015007718puf60b10083.721ENSMZEG00005019425-10082.987Maylandia_zebra
ENSORLG00015007718puf60b10096.699ENSMZEG00005018515puf60b10096.699Maylandia_zebra
ENSORLG00015007718puf60b10085.086ENSMGAG00000013070PUF609589.244Meleagris_gallopavo
ENSORLG00015007718puf60b9667.589ENSMAUG00000018549-9567.456Mesocricetus_auratus
ENSORLG00015007718puf60b6889.444ENSMAUG00000014267-9088.525Mesocricetus_auratus
ENSORLG00015007718puf60b10084.895ENSMICG00000012226PUF609983.992Microcebus_murinus
ENSORLG00015007718puf60b10085.086ENSMOCG00000018780Puf609384.121Microtus_ochrogaster
ENSORLG00015007718puf60b10096.893ENSMMOG00000004217puf60b10096.893Mola_mola
ENSORLG00015007718puf60b10072.727ENSMMOG00000018059-9976.256Mola_mola
ENSORLG00015007718puf60b10084.512ENSMODG00000009161PUF609483.554Monodelphis_domestica
ENSORLG00015007718puf60b10088.738ENSMALG00000006797puf60b10087.879Monopterus_albus
ENSORLG00015007718puf60b10082.752ENSMALG00000000200-10081.474Monopterus_albus
ENSORLG00015007718puf60b10085.277MGP_CAROLIEiJ_G0019910Puf609384.499Mus_caroli
ENSORLG00015007718puf60b10085.277ENSMUSG00000002524Puf609384.499Mus_musculus
ENSORLG00015007718puf60b10085.277MGP_PahariEiJ_G0019920Puf609384.499Mus_pahari
ENSORLG00015007718puf60b10085.277MGP_SPRETEiJ_G0020812Puf609384.499Mus_spretus
ENSORLG00015007718puf60b10084.704ENSMPUG00000008137PUF609283.743Mustela_putorius_furo
ENSORLG00015007718puf60b10084.321ENSMLUG00000000238-9383.365Myotis_lucifugus
ENSORLG00015007718puf60b10078.776ENSMLUG00000013032-9877.883Myotis_lucifugus
ENSORLG00015007718puf60b10085.086ENSNGAG00000000712Puf6010084.704Nannospalax_galili
ENSORLG00015007718puf60b8195.704ENSNBRG00000013047puf60b9794.749Neolamprologus_brichardi
ENSORLG00015007718puf60b10083.333ENSNBRG00000017223-10082.420Neolamprologus_brichardi
ENSORLG00015007718puf60b10084.704ENSNLEG00000002156PUF609883.743Nomascus_leucogenys
ENSORLG00015007718puf60b7293.502ENSOPRG00000002147PUF607293.502Ochotona_princeps
ENSORLG00015007718puf60b9863.241ENSODEG00000015513-9761.464Octodon_degus
ENSORLG00015007718puf60b7189.706ENSODEG00000014024-9088.728Octodon_degus
ENSORLG00015007718puf60b10083.527ENSONIG00000014030-9982.609Oreochromis_niloticus
ENSORLG00015007718puf60b10096.699ENSONIG00000006247puf60b9896.545Oreochromis_niloticus
ENSORLG00015007718puf60b9771.514ENSOANG00000006962PUF609870.669Ornithorhynchus_anatinus
ENSORLG00015007718puf60b9981.731ENSORLG00000028655-9981.731Oryzias_latipes
ENSORLG00015007718puf60b10099.621ENSORLG00000012279puf60b10099.621Oryzias_latipes
ENSORLG00015007718puf60b10099.621ENSORLG00020007333puf6010099.621Oryzias_latipes_hni
ENSORLG00015007718puf60b9982.364ENSORLG00020018144-9981.664Oryzias_latipes_hni
ENSORLG00015007718puf60b9983.140ENSOMEG00000022185-9982.420Oryzias_melastigma
ENSORLG00015007718puf60b10096.846ENSOMEG00000001643puf60b10096.846Oryzias_melastigma
ENSORLG00015007718puf60b10084.895ENSOGAG00000006259PUF609383.932Otolemur_garnettii
ENSORLG00015007718puf60b10083.269ENSOARG00000016235PUF609882.319Ovis_aries
ENSORLG00015007718puf60b10084.704ENSPPAG00000029933PUF609982.991Pan_paniscus
ENSORLG00015007718puf60b10084.895ENSPPRG00000003257PUF6010084.512Panthera_pardus
ENSORLG00015007718puf60b10082.600ENSPTIG00000009795PUF609981.664Panthera_tigris_altaica
ENSORLG00015007718puf60b10084.704ENSPTRG00000043963-9883.743Pan_troglodytes
ENSORLG00015007718puf60b10084.704ENSPTRG00000020670PUF609982.991Pan_troglodytes
ENSORLG00015007718puf60b10084.704ENSPANG00000021936PUF609883.743Papio_anubis
ENSORLG00015007718puf60b10089.903ENSPKIG00000012204puf60b10089.903Paramormyrops_kingsleyae
ENSORLG00015007718puf60b10089.168ENSPKIG00000004295puf60a9991.343Paramormyrops_kingsleyae
ENSORLG00015007718puf60b10084.704ENSPSIG00000004679PUF609984.121Pelodiscus_sinensis
ENSORLG00015007718puf60b10094.595ENSPMGG00000013444puf60b9993.822Periophthalmus_magnuspinnatus
ENSORLG00015007718puf60b10085.086ENSPEMG00000008820Puf609384.121Peromyscus_maniculatus_bairdii
ENSORLG00015007718puf60b10084.895ENSPCIG00000020270PUF609983.616Phascolarctos_cinereus
ENSORLG00015007718puf60b10082.012ENSPFOG00000011118-10081.509Poecilia_formosa
ENSORLG00015007718puf60b10098.058ENSPFOG00000019217puf60b9994.626Poecilia_formosa
ENSORLG00015007718puf60b10098.058ENSPLAG00000010754puf60b10098.058Poecilia_latipinna
ENSORLG00015007718puf60b10082.205ENSPLAG00000017025-9281.321Poecilia_latipinna
ENSORLG00015007718puf60b10082.205ENSPMEG00000009767-9281.698Poecilia_mexicana
ENSORLG00015007718puf60b10098.058ENSPMEG00000000838puf60b10098.058Poecilia_mexicana
ENSORLG00015007718puf60b10095.463ENSPREG00000005440puf60b10095.203Poecilia_reticulata
ENSORLG00015007718puf60b8182.311ENSPPYG00000018951-9581.840Pongo_abelii
ENSORLG00015007718puf60b8183.962ENSPCAG00000014837PUF6010083.491Procavia_capensis
ENSORLG00015007718puf60b10084.704ENSPCOG00000027981PUF609983.835Propithecus_coquereli
ENSORLG00015007718puf60b10096.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSORLG00015007718puf60b10083.721ENSPNYG00000004273-10082.987Pundamilia_nyererei
ENSORLG00015007718puf60b10096.699ENSPNYG00000002556puf60b10096.699Pundamilia_nyererei
ENSORLG00015007718puf60b10079.417ENSPNAG00000019415puf60b9178.667Pygocentrus_nattereri
ENSORLG00015007718puf60b10084.526ENSPNAG00000019909puf60a9984.942Pygocentrus_nattereri
ENSORLG00015007718puf60b10085.277ENSRNOG00000009960Puf609384.499Rattus_norvegicus
ENSORLG00015007718puf60b10084.704ENSRBIG00000035274PUF609883.743Rhinopithecus_bieti
ENSORLG00015007718puf60b10084.704ENSRROG00000029360PUF609983.743Rhinopithecus_roxellana
ENSORLG00015007718puf60b10083.365ENSSBOG00000027089PUF609981.869Saimiri_boliviensis_boliviensis
ENSORLG00015007718puf60b9084.289ENSSHAG00000006668PUF609083.229Sarcophilus_harrisii
ENSORLG00015007718puf60b10082.534ENSSFOG00015019619puf60b9984.818Scleropages_formosus
ENSORLG00015007718puf60b9589.431ENSSFOG00015019371puf60a9889.634Scleropages_formosus
ENSORLG00015007718puf60b7797.980ENSSMAG00000016381puf60b7897.980Scophthalmus_maximus
ENSORLG00015007718puf60b9982.812ENSSDUG00000007048-9783.984Seriola_dumerili
ENSORLG00015007718puf60b10095.057ENSSDUG00000009935puf60b9994.888Seriola_dumerili
ENSORLG00015007718puf60b10081.346ENSSLDG00000007366-9981.766Seriola_lalandi_dorsalis
ENSORLG00015007718puf60b10097.087ENSSLDG00000024011puf60b10094.140Seriola_lalandi_dorsalis
ENSORLG00015007718puf60b6477.581ENSSPUG00000013518PUF609277.581Sphenodon_punctatus
ENSORLG00015007718puf60b10082.752ENSSPAG00000020285-10083.333Stegastes_partitus
ENSORLG00015007718puf60b10093.951ENSSPAG00000012144puf60b10094.140Stegastes_partitus
ENSORLG00015007718puf60b10084.895ENSSSCG00000038800PUF609880.907Sus_scrofa
ENSORLG00015007718puf60b10081.644ENSTGUG00000012797-10082.008Taeniopygia_guttata
ENSORLG00015007718puf60b10097.087ENSTRUG00000005420puf60b10093.951Takifugu_rubripes
ENSORLG00015007718puf60b10078.488ENSTRUG00000008843-10078.295Takifugu_rubripes
ENSORLG00015007718puf60b10097.087ENSTNIG00000013675puf60b9997.087Tetraodon_nigroviridis
ENSORLG00015007718puf60b10079.417ENSTNIG00000003069-9979.417Tetraodon_nigroviridis
ENSORLG00015007718puf60b5585.567ENSTBEG00000002751-9785.567Tupaia_belangeri
ENSORLG00015007718puf60b7765.156ENSTBEG00000001899-10066.006Tupaia_belangeri
ENSORLG00015007718puf60b10083.556ENSTTRG00000017088PUF6010083.365Tursiops_truncatus
ENSORLG00015007718puf60b10084.895ENSUAMG00000024917PUF609883.932Ursus_americanus
ENSORLG00015007718puf60b10079.924ENSUMAG00000000272PUF609378.828Ursus_maritimus
ENSORLG00015007718puf60b10084.895ENSVVUG00000022527PUF6010084.512Vulpes_vulpes
ENSORLG00015007718puf60b10083.556ENSXETG00000012469puf609882.922Xenopus_tropicalis
ENSORLG00015007718puf60b10094.757ENSXCOG00000012355puf60b10094.757Xiphophorus_couchianus
ENSORLG00015007718puf60b10098.058ENSXMAG00000001862puf60b10098.058Xiphophorus_maculatus
ENSORLG00015007718puf60b10078.917ENSXMAG00000010507-9977.820Xiphophorus_maculatus

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