EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015007734 (Gene tree)
Gene ID: -
Gene Symbol: swt1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 17270 bases
Position: chr4:16383502-16400771
Accession: 101172890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015026214	PIN_4	PF13638.6	4.7e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003435	-	3218	XM_023954315	ENSORLP00015026214	960 (aa)	XP_023810083	-

Gene Model

Click here to download ENSORLG00015007734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007734's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007734	swt1	59	33.621	ENSG00000116668	SWT1	59	33.621	Homo_sapiens
ENSORLG00015007734	swt1	98	49.642	ENSAPOG00000014897	-	99	49.849	Acanthochromis_polyacanthus
ENSORLG00015007734	swt1	59	33.333	ENSAMEG00000013585	SWT1	60	33.333	Ailuropoda_melanoleuca
ENSORLG00015007734	swt1	98	49.899	ENSAOCG00000013932	swt1	99	50.050	Amphiprion_ocellaris
ENSORLG00015007734	swt1	98	50.153	ENSAPEG00000009613	-	99	50.351	Amphiprion_percula
ENSORLG00015007734	swt1	98	50.615	ENSATEG00000018946	swt1	99	50.656	Anabas_testudineus
ENSORLG00015007734	swt1	59	37.478	ENSAPLG00000008607	SWT1	74	37.478	Anas_platyrhynchos
ENSORLG00015007734	swt1	58	34.729	ENSACAG00000002276	SWT1	62	34.790	Anolis_carolinensis
ENSORLG00015007734	swt1	59	33.219	ENSANAG00000027068	SWT1	59	33.219	Aotus_nancymaae
ENSORLG00015007734	swt1	76	61.029	ENSACLG00000009742	swt1	91	61.694	Astatotilapia_calliptera
ENSORLG00015007734	swt1	66	44.795	ENSAMXG00000010971	swt1	61	44.795	Astyanax_mexicanus
ENSORLG00015007734	swt1	59	32.526	ENSCJAG00000005544	SWT1	59	32.526	Callithrix_jacchus
ENSORLG00015007734	swt1	59	33.162	ENSCAFG00000013543	SWT1	60	32.920	Canis_familiaris
ENSORLG00015007734	swt1	59	33.162	ENSCAFG00020015648	SWT1	63	33.162	Canis_lupus_dingo
ENSORLG00015007734	swt1	59	33.898	ENSCHIG00000023511	SWT1	93	33.898	Capra_hircus
ENSORLG00015007734	swt1	59	33.162	ENSTSYG00000010470	SWT1	60	33.162	Carlito_syrichta
ENSORLG00015007734	swt1	54	33.517	ENSCPOG00000014251	SWT1	62	33.517	Cavia_porcellus
ENSORLG00015007734	swt1	59	33.390	ENSCCAG00000033926	SWT1	59	33.390	Cebus_capucinus
ENSORLG00015007734	swt1	59	33.904	ENSCATG00000042210	SWT1	92	33.562	Cercocebus_atys
ENSORLG00015007734	swt1	59	34.021	ENSCLAG00000013959	SWT1	61	34.021	Chinchilla_lanigera
ENSORLG00015007734	swt1	59	33.849	ENSCSAG00000012895	SWT1	60	33.849	Chlorocebus_sabaeus
ENSORLG00015007734	swt1	59	36.644	ENSCPBG00000015691	SWT1	60	36.473	Chrysemys_picta_bellii
ENSORLG00015007734	swt1	59	33.448	ENSCANG00000032207	SWT1	92	33.162	Colobus_angolensis_palliatus
ENSORLG00015007734	swt1	63	33.819	ENSCGRG00001022955	Swt1	66	33.819	Cricetulus_griseus_chok1gshd
ENSORLG00015007734	swt1	63	33.819	ENSCGRG00000010224	Swt1	64	33.819	Cricetulus_griseus_crigri
ENSORLG00015007734	swt1	64	56.844	ENSCSEG00000017352	swt1	92	52.566	Cynoglossus_semilaevis
ENSORLG00015007734	swt1	59	46.341	ENSDARG00000094010	swt1	56	46.341	Danio_rerio
ENSORLG00015007734	swt1	50	33.600	ENSDNOG00000005254	SWT1	57	33.600	Dasypus_novemcinctus
ENSORLG00015007734	swt1	63	32.358	ENSDORG00000010531	Swt1	68	32.520	Dipodomys_ordii
ENSORLG00015007734	swt1	59	32.470	ENSEASG00005005530	SWT1	63	32.470	Equus_asinus_asinus
ENSORLG00015007734	swt1	59	32.530	ENSECAG00000012085	SWT1	63	32.530	Equus_caballus
ENSORLG00015007734	swt1	66	47.278	ENSELUG00000020565	swt1	61	47.907	Esox_lucius
ENSORLG00015007734	swt1	59	32.069	ENSFCAG00000011286	SWT1	60	32.069	Felis_catus
ENSORLG00015007734	swt1	61	35.702	ENSFALG00000003206	SWT1	63	35.702	Ficedula_albicollis
ENSORLG00015007734	swt1	61	33.388	ENSFDAG00000007569	SWT1	63	33.388	Fukomys_damarensis
ENSORLG00015007734	swt1	58	35.284	ENSGALG00000034230	SWT1	62	35.456	Gallus_gallus
ENSORLG00015007734	swt1	94	48.938	ENSGAFG00000007803	-	96	48.190	Gambusia_affinis
ENSORLG00015007734	swt1	62	36.020	ENSGAGG00000025050	SWT1	93	36.602	Gopherus_agassizii
ENSORLG00015007734	swt1	53	33.208	ENSGGOG00000041167	-	89	33.208	Gorilla_gorilla
ENSORLG00015007734	swt1	79	60.938	ENSHBUG00000006188	swt1	91	61.565	Haplochromis_burtoni
ENSORLG00015007734	swt1	59	34.596	ENSHGLG00000006542	SWT1	63	34.596	Heterocephalus_glaber_female
ENSORLG00015007734	swt1	59	34.596	ENSHGLG00100014408	SWT1	61	34.596	Heterocephalus_glaber_male
ENSORLG00015007734	swt1	59	45.263	ENSIPUG00000009113	-	87	36.353	Ictalurus_punctatus
ENSORLG00015007734	swt1	59	33.562	ENSSTOG00000010356	SWT1	61	33.562	Ictidomys_tridecemlineatus
ENSORLG00015007734	swt1	59	34.364	ENSJJAG00000015927	Swt1	63	34.364	Jaculus_jaculus
ENSORLG00015007734	swt1	99	49.649	ENSKMAG00000012533	swt1	100	49.448	Kryptolebias_marmoratus
ENSORLG00015007734	swt1	93	48.026	ENSLBEG00000020663	-	99	46.647	Labrus_bergylta
ENSORLG00015007734	swt1	59	36.833	ENSLACG00000009194	SWT1	79	36.707	Latimeria_chalumnae
ENSORLG00015007734	swt1	95	32.822	ENSLOCG00000001749	swt1	97	40.459	Lepisosteus_oculatus
ENSORLG00015007734	swt1	61	32.516	ENSLAFG00000004346	-	96	32.516	Loxodonta_africana
ENSORLG00015007734	swt1	59	33.677	ENSMFAG00000031793	SWT1	93	33.390	Macaca_fascicularis
ENSORLG00015007734	swt1	58	33.102	ENSMMUG00000013882	SWT1	92	33.102	Macaca_mulatta
ENSORLG00015007734	swt1	59	33.733	ENSMNEG00000035502	SWT1	93	33.733	Macaca_nemestrina
ENSORLG00015007734	swt1	59	33.276	ENSMLEG00000038692	SWT1	92	33.219	Mandrillus_leucophaeus
ENSORLG00015007734	swt1	79	60.938	ENSMZEG00005018489	swt1	91	61.565	Maylandia_zebra
ENSORLG00015007734	swt1	59	35.630	ENSMGAG00000000973	SWT1	93	35.630	Meleagris_gallopavo
ENSORLG00015007734	swt1	63	31.301	ENSMAUG00000007996	Swt1	60	31.301	Mesocricetus_auratus
ENSORLG00015007734	swt1	59	33.793	ENSMICG00000014975	SWT1	60	33.793	Microcebus_murinus
ENSORLG00015007734	swt1	63	34.410	ENSMOCG00000009776	Swt1	63	34.410	Microtus_ochrogaster
ENSORLG00015007734	swt1	64	32.114	ENSMODG00000007472	SWT1	64	32.114	Monodelphis_domestica
ENSORLG00015007734	swt1	98	47.053	ENSMALG00000019308	swt1	94	48.191	Monopterus_albus
ENSORLG00015007734	swt1	59	34.708	MGP_CAROLIEiJ_G0014692	Swt1	63	46.541	Mus_caroli
ENSORLG00015007734	swt1	59	34.251	ENSMUSG00000052748	Swt1	62	45.223	Mus_musculus
ENSORLG00015007734	swt1	59	34.991	MGP_PahariEiJ_G0027928	Swt1	63	45.912	Mus_pahari
ENSORLG00015007734	swt1	59	35.000	MGP_SPRETEiJ_G0015499	Swt1	62	46.497	Mus_spretus
ENSORLG00015007734	swt1	59	33.505	ENSMPUG00000011913	SWT1	60	33.505	Mustela_putorius_furo
ENSORLG00015007734	swt1	62	32.540	ENSMLUG00000001142	SWT1	63	32.540	Myotis_lucifugus
ENSORLG00015007734	swt1	59	33.621	ENSNGAG00000021080	Swt1	63	33.225	Nannospalax_galili
ENSORLG00015007734	swt1	59	32.988	ENSNLEG00000018031	SWT1	59	32.988	Nomascus_leucogenys
ENSORLG00015007734	swt1	88	60.201	ENSONIG00000009994	swt1	96	60.201	Oreochromis_niloticus
ENSORLG00015007734	swt1	58	33.333	ENSOANG00000001013	-	69	33.333	Ornithorhynchus_anatinus
ENSORLG00015007734	swt1	59	33.901	ENSOCUG00000004901	SWT1	61	34.017	Oryctolagus_cuniculus
ENSORLG00015007734	swt1	100	97.604	ENSORLG00000009682	swt1	99	97.604	Oryzias_latipes
ENSORLG00015007734	swt1	100	96.667	ENSORLG00020011654	swt1	99	96.667	Oryzias_latipes_hni
ENSORLG00015007734	swt1	98	71.779	ENSOMEG00000006607	swt1	99	71.443	Oryzias_melastigma
ENSORLG00015007734	swt1	59	33.907	ENSOGAG00000016195	SWT1	60	33.907	Otolemur_garnettii
ENSORLG00015007734	swt1	59	33.621	ENSOARG00000004156	SWT1	59	33.621	Ovis_aries
ENSORLG00015007734	swt1	59	33.621	ENSPPAG00000021400	SWT1	59	33.621	Pan_paniscus
ENSORLG00015007734	swt1	59	32.646	ENSPPRG00000023754	SWT1	60	32.646	Panthera_pardus
ENSORLG00015007734	swt1	59	32.646	ENSPTIG00000021889	SWT1	60	32.646	Panthera_tigris_altaica
ENSORLG00015007734	swt1	59	33.966	ENSPTRG00000001777	SWT1	59	33.966	Pan_troglodytes
ENSORLG00015007734	swt1	59	33.562	ENSPANG00000005099	SWT1	92	33.562	Papio_anubis
ENSORLG00015007734	swt1	60	46.907	ENSPKIG00000005979	swt1	58	46.735	Paramormyrops_kingsleyae
ENSORLG00015007734	swt1	59	36.519	ENSPSIG00000008961	SWT1	60	36.519	Pelodiscus_sinensis
ENSORLG00015007734	swt1	59	34.483	ENSPEMG00000008208	Swt1	59	34.483	Peromyscus_maniculatus_bairdii
ENSORLG00015007734	swt1	59	34.053	ENSPCIG00000002443	SWT1	60	34.053	Phascolarctos_cinereus
ENSORLG00015007734	swt1	99	48.060	ENSPFOG00000010988	-	96	48.407	Poecilia_formosa
ENSORLG00015007734	swt1	99	48.159	ENSPLAG00000022908	-	96	48.510	Poecilia_latipinna
ENSORLG00015007734	swt1	99	47.865	ENSPMEG00000006943	-	96	48.205	Poecilia_mexicana
ENSORLG00015007734	swt1	64	43.645	ENSPREG00000014723	-	84	43.961	Poecilia_reticulata
ENSORLG00015007734	swt1	59	33.448	ENSPPYG00000000415	SWT1	59	33.448	Pongo_abelii
ENSORLG00015007734	swt1	59	30.345	ENSPVAG00000005968	SWT1	60	30.345	Pteropus_vampyrus
ENSORLG00015007734	swt1	79	60.938	ENSPNYG00000012934	swt1	91	61.565	Pundamilia_nyererei
ENSORLG00015007734	swt1	59	47.387	ENSPNAG00000017795	swt1	57	47.387	Pygocentrus_nattereri
ENSORLG00015007734	swt1	68	33.189	ENSRNOG00000032258	Swt1	73	33.189	Rattus_norvegicus
ENSORLG00015007734	swt1	59	33.333	ENSRBIG00000040630	SWT1	92	33.161	Rhinopithecus_bieti
ENSORLG00015007734	swt1	68	31.526	ENSSBOG00000028825	SWT1	73	31.526	Saimiri_boliviensis_boliviensis
ENSORLG00015007734	swt1	59	34.465	ENSSHAG00000009241	SWT1	60	34.465	Sarcophilus_harrisii
ENSORLG00015007734	swt1	59	46.701	ENSSFOG00015004895	swt1	56	46.701	Scleropages_formosus
ENSORLG00015007734	swt1	98	50.408	ENSSDUG00000012345	swt1	99	50.351	Seriola_dumerili
ENSORLG00015007734	swt1	98	50.204	ENSSLDG00000003821	swt1	99	50.251	Seriola_lalandi_dorsalis
ENSORLG00015007734	swt1	59	35.214	ENSSPUG00000003899	SWT1	59	35.214	Sphenodon_punctatus
ENSORLG00015007734	swt1	98	51.020	ENSSPAG00000001030	swt1	99	51.156	Stegastes_partitus
ENSORLG00015007734	swt1	59	33.390	ENSSSCG00000015569	SWT1	62	33.733	Sus_scrofa
ENSORLG00015007734	swt1	59	36.505	ENSTGUG00000003718	-	97	36.505	Taeniopygia_guttata
ENSORLG00015007734	swt1	99	42.915	ENSTRUG00000006420	swt1	96	43.127	Takifugu_rubripes
ENSORLG00015007734	swt1	59	32.818	ENSTTRG00000005914	SWT1	60	32.818	Tursiops_truncatus
ENSORLG00015007734	swt1	59	33.448	ENSUAMG00000020937	SWT1	65	33.448	Ursus_americanus
ENSORLG00015007734	swt1	59	33.448	ENSUMAG00000021918	SWT1	61	33.215	Ursus_maritimus
ENSORLG00015007734	swt1	59	33.333	ENSVVUG00000009182	SWT1	62	33.333	Vulpes_vulpes
ENSORLG00015007734	swt1	99	48.241	ENSXMAG00000023472	-	96	48.604	Xiphophorus_maculatus