EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007794 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: -
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 1294 bases
Position: chr11:9935703-9936996
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015026247	LSM	PF01423.22	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003343	-	360	-	ENSORLP00015026247	119 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007794	oscp1a	62	32.432	ENSORLG00015013402	snrpd1	62	32.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007794	oscp1a	97	65.254	ENSG00000181817	LSM10	96	65.254	Homo_sapiens
ENSORLG00015007794	oscp1a	98	66.387	ENSAMEG00000019854	LSM10	97	66.387	Ailuropoda_melanoleuca
ENSORLG00015007794	oscp1a	99	80.000	ENSACIG00000015420	oscp1a	79	80.000	Amphilophus_citrinellus
ENSORLG00015007794	oscp1a	100	79.339	ENSAOCG00000015618	LSM10	100	79.339	Amphiprion_ocellaris
ENSORLG00015007794	oscp1a	92	78.899	ENSAOCG00000015607	LSM10	84	78.899	Amphiprion_ocellaris
ENSORLG00015007794	oscp1a	100	79.339	ENSAOCG00000014654	-	100	79.339	Amphiprion_ocellaris
ENSORLG00015007794	oscp1a	92	78.899	ENSAPEG00000021851	LSM10	84	78.899	Amphiprion_percula
ENSORLG00015007794	oscp1a	100	79.339	ENSAPEG00000021845	-	100	79.339	Amphiprion_percula
ENSORLG00015007794	oscp1a	94	81.579	ENSATEG00000006310	oscp1a	84	81.579	Anabas_testudineus
ENSORLG00015007794	oscp1a	95	62.609	ENSACAG00000001231	LSM10	93	62.609	Anolis_carolinensis
ENSORLG00015007794	oscp1a	92	66.364	ENSANAG00000031489	-	90	66.364	Aotus_nancymaae
ENSORLG00015007794	oscp1a	97	65.254	ENSANAG00000018759	-	96	65.254	Aotus_nancymaae
ENSORLG00015007794	oscp1a	100	80.165	ENSACLG00000004728	oscp1a	98	80.165	Astatotilapia_calliptera
ENSORLG00015007794	oscp1a	100	70.833	ENSAMXG00000025301	oscp1a	100	70.833	Astyanax_mexicanus
ENSORLG00015007794	oscp1a	97	64.407	ENSBTAG00000024096	LSM10	97	64.407	Bos_taurus
ENSORLG00015007794	oscp1a	97	66.102	ENSCJAG00000044880	LSM10	96	66.102	Callithrix_jacchus
ENSORLG00015007794	oscp1a	98	66.387	ENSCAFG00000003382	LSM10	97	66.387	Canis_familiaris
ENSORLG00015007794	oscp1a	98	66.387	ENSCAFG00020008920	LSM10	97	66.387	Canis_lupus_dingo
ENSORLG00015007794	oscp1a	97	64.407	ENSCHIG00000009398	LSM10	97	64.407	Capra_hircus
ENSORLG00015007794	oscp1a	98	67.227	ENSCAPG00000012567	LSM10	97	67.227	Cavia_aperea
ENSORLG00015007794	oscp1a	98	67.227	ENSCPOG00000039302	LSM10	97	67.227	Cavia_porcellus
ENSORLG00015007794	oscp1a	97	65.254	ENSCCAG00000018913	-	96	65.254	Cebus_capucinus
ENSORLG00015007794	oscp1a	95	63.717	ENSCCAG00000008378	-	92	63.717	Cebus_capucinus
ENSORLG00015007794	oscp1a	96	65.517	ENSCATG00000006589	LSM10	94	65.517	Cercocebus_atys
ENSORLG00015007794	oscp1a	98	65.546	ENSCLAG00000008633	LSM10	97	65.546	Chinchilla_lanigera
ENSORLG00015007794	oscp1a	96	65.517	ENSCSAG00000000134	LSM10	94	65.517	Chlorocebus_sabaeus
ENSORLG00015007794	oscp1a	98	63.636	ENSCHOG00000008615	LSM10	97	63.636	Choloepus_hoffmanni
ENSORLG00015007794	oscp1a	82	31.959	ENSCSAVG00000001896	-	83	31.959	Ciona_savignyi
ENSORLG00015007794	oscp1a	96	65.517	ENSCANG00000019928	LSM10	94	65.517	Colobus_angolensis_palliatus
ENSORLG00015007794	oscp1a	97	67.521	ENSCGRG00001004317	-	96	67.521	Cricetulus_griseus_chok1gshd
ENSORLG00015007794	oscp1a	95	61.538	ENSCGRG00001022673	-	94	61.538	Cricetulus_griseus_chok1gshd
ENSORLG00015007794	oscp1a	97	67.521	ENSCGRG00000014935	-	96	67.521	Cricetulus_griseus_crigri
ENSORLG00015007794	oscp1a	95	61.538	ENSCGRG00000015514	-	94	61.538	Cricetulus_griseus_crigri
ENSORLG00015007794	oscp1a	96	80.172	ENSCSEG00000010374	oscp1a	78	80.172	Cynoglossus_semilaevis
ENSORLG00015007794	oscp1a	95	77.876	ENSCVAG00000001536	oscp1a	87	77.876	Cyprinodon_variegatus
ENSORLG00015007794	oscp1a	70	72.289	ENSDARG00000109563	CABZ01074453.1	96	72.289	Danio_rerio
ENSORLG00015007794	oscp1a	98	73.729	ENSDARG00000101222	oscp1a	98	73.729	Danio_rerio
ENSORLG00015007794	oscp1a	97	66.102	ENSDNOG00000036662	LSM10	96	66.102	Dasypus_novemcinctus
ENSORLG00015007794	oscp1a	97	67.521	ENSDORG00000007579	Lsm10	95	67.521	Dipodomys_ordii
ENSORLG00015007794	oscp1a	97	66.957	ENSETEG00000005703	LSM10	95	66.957	Echinops_telfairi
ENSORLG00015007794	oscp1a	97	51.282	ENSEBUG00000001312	oscp1a	96	51.282	Eptatretus_burgeri
ENSORLG00015007794	oscp1a	98	66.387	ENSEASG00005012194	LSM10	97	66.387	Equus_asinus_asinus
ENSORLG00015007794	oscp1a	98	66.387	ENSECAG00000005071	LSM10	97	66.387	Equus_caballus
ENSORLG00015007794	oscp1a	98	65.546	ENSEEUG00000012032	LSM10	97	65.546	Erinaceus_europaeus
ENSORLG00015007794	oscp1a	98	76.471	ENSELUG00000007452	oscp1a	98	76.471	Esox_lucius
ENSORLG00015007794	oscp1a	95	64.348	ENSFALG00000000851	LSM10	93	64.348	Ficedula_albicollis
ENSORLG00015007794	oscp1a	98	67.227	ENSFDAG00000021056	LSM10	97	67.227	Fukomys_damarensis
ENSORLG00015007794	oscp1a	89	77.064	ENSFHEG00000001058	oscp1a	94	77.064	Fundulus_heteroclitus
ENSORLG00015007794	oscp1a	97	68.966	ENSGMOG00000019832	oscp1a	94	68.966	Gadus_morhua
ENSORLG00015007794	oscp1a	95	66.957	ENSGALG00000002127	LSM10	93	66.957	Gallus_gallus
ENSORLG00015007794	oscp1a	85	68.932	ENSGAFG00000016445	oscp1a	84	68.932	Gambusia_affinis
ENSORLG00015007794	oscp1a	99	80.833	ENSGACG00000002329	oscp1a	98	80.833	Gasterosteus_aculeatus
ENSORLG00015007794	oscp1a	95	66.087	ENSGAGG00000024848	LSM10	93	66.087	Gopherus_agassizii
ENSORLG00015007794	oscp1a	97	65.254	ENSGGOG00000003556	LSM10	96	65.254	Gorilla_gorilla
ENSORLG00015007794	oscp1a	100	80.992	ENSHBUG00000001722	oscp1a	98	80.992	Haplochromis_burtoni
ENSORLG00015007794	oscp1a	98	65.546	ENSHGLG00000011625	LSM10	97	65.546	Heterocephalus_glaber_female
ENSORLG00015007794	oscp1a	98	65.546	ENSHGLG00100001769	LSM10	97	65.546	Heterocephalus_glaber_male
ENSORLG00015007794	oscp1a	89	69.811	ENSIPUG00000005808	oscp1a	92	69.811	Ictalurus_punctatus
ENSORLG00015007794	oscp1a	98	66.387	ENSSTOG00000000606	LSM10	97	66.387	Ictidomys_tridecemlineatus
ENSORLG00015007794	oscp1a	100	80.992	ENSKMAG00000012143	oscp1a	100	80.992	Kryptolebias_marmoratus
ENSORLG00015007794	oscp1a	94	82.456	ENSLBEG00000017764	oscp1a	93	82.456	Labrus_bergylta
ENSORLG00015007794	oscp1a	98	63.025	ENSLACG00000015904	LSM10	92	63.025	Latimeria_chalumnae
ENSORLG00015007794	oscp1a	95	73.043	ENSLOCG00000018277	oscp1a	94	73.043	Lepisosteus_oculatus
ENSORLG00015007794	oscp1a	96	67.544	ENSLAFG00000009600	LSM10	94	67.544	Loxodonta_africana
ENSORLG00015007794	oscp1a	96	65.517	ENSMFAG00000009115	LSM10	94	65.517	Macaca_fascicularis
ENSORLG00015007794	oscp1a	96	65.517	ENSMMUG00000017338	LSM10	94	65.517	Macaca_mulatta
ENSORLG00015007794	oscp1a	96	65.517	ENSMNEG00000020023	LSM10	94	65.517	Macaca_nemestrina
ENSORLG00015007794	oscp1a	96	65.517	ENSMLEG00000025150	LSM10	94	65.517	Mandrillus_leucophaeus
ENSORLG00015007794	oscp1a	99	78.333	ENSMAMG00000004427	oscp1a	98	78.333	Mastacembelus_armatus
ENSORLG00015007794	oscp1a	100	80.165	ENSMZEG00005026307	oscp1a	98	80.165	Maylandia_zebra
ENSORLG00015007794	oscp1a	95	66.087	ENSMGAG00000015707	LSM10	93	66.087	Meleagris_gallopavo
ENSORLG00015007794	oscp1a	97	67.521	ENSMAUG00000016624	Lsm10	96	67.521	Mesocricetus_auratus
ENSORLG00015007794	oscp1a	97	66.102	ENSMOCG00000021943	Lsm10	97	66.102	Microtus_ochrogaster
ENSORLG00015007794	oscp1a	94	82.456	ENSMMOG00000013597	oscp1a	85	82.456	Mola_mola
ENSORLG00015007794	oscp1a	98	68.908	ENSMODG00000023328	LSM10	97	68.908	Monodelphis_domestica
ENSORLG00015007794	oscp1a	97	63.559	MGP_CAROLIEiJ_G0026467	Lsm10	96	67.416	Mus_caroli
ENSORLG00015007794	oscp1a	97	63.559	ENSMUSG00000050188	Lsm10	96	67.416	Mus_musculus
ENSORLG00015007794	oscp1a	97	63.559	MGP_PahariEiJ_G0028798	Lsm10	96	67.416	Mus_pahari
ENSORLG00015007794	oscp1a	97	63.559	MGP_SPRETEiJ_G0027446	Lsm10	96	67.416	Mus_spretus
ENSORLG00015007794	oscp1a	98	66.387	ENSMPUG00000018593	LSM10	97	66.387	Mustela_putorius_furo
ENSORLG00015007794	oscp1a	98	66.387	ENSMLUG00000023895	LSM10	97	66.387	Myotis_lucifugus
ENSORLG00015007794	oscp1a	97	64.407	ENSNGAG00000015011	Lsm10	96	64.407	Nannospalax_galili
ENSORLG00015007794	oscp1a	99	81.667	ENSNBRG00000014306	oscp1a	98	81.667	Neolamprologus_brichardi
ENSORLG00015007794	oscp1a	97	65.254	ENSNLEG00000033754	LSM10	96	65.254	Nomascus_leucogenys
ENSORLG00015007794	oscp1a	98	68.908	ENSMEUG00000006313	LSM10	97	68.908	Notamacropus_eugenii
ENSORLG00015007794	oscp1a	97	65.812	ENSOPRG00000001699	LSM10	95	65.812	Ochotona_princeps
ENSORLG00015007794	oscp1a	98	65.546	ENSODEG00000019161	LSM10	97	65.546	Octodon_degus
ENSORLG00015007794	oscp1a	99	81.667	ENSONIG00000020904	oscp1a	98	81.667	Oreochromis_niloticus
ENSORLG00015007794	oscp1a	98	64.706	ENSOANG00000002066	LSM10	97	64.706	Ornithorhynchus_anatinus
ENSORLG00015007794	oscp1a	98	64.706	ENSOCUG00000005333	LSM10	97	64.706	Oryctolagus_cuniculus
ENSORLG00015007794	oscp1a	100	97.521	ENSORLG00000009504	oscp1a	100	97.521	Oryzias_latipes
ENSORLG00015007794	oscp1a	100	97.521	ENSORLG00020016201	oscp1a	100	97.521	Oryzias_latipes_hni
ENSORLG00015007794	oscp1a	98	67.227	ENSOGAG00000002653	LSM10	97	67.227	Otolemur_garnettii
ENSORLG00015007794	oscp1a	97	64.407	ENSOARG00000009596	LSM10	97	64.407	Ovis_aries
ENSORLG00015007794	oscp1a	97	65.254	ENSPPAG00000023465	LSM10	96	65.254	Pan_paniscus
ENSORLG00015007794	oscp1a	98	66.387	ENSPPRG00000014619	LSM10	97	66.387	Panthera_pardus
ENSORLG00015007794	oscp1a	98	66.387	ENSPTIG00000004613	LSM10	97	66.387	Panthera_tigris_altaica
ENSORLG00015007794	oscp1a	97	65.254	ENSPTRG00000000539	LSM10	96	65.254	Pan_troglodytes
ENSORLG00015007794	oscp1a	96	65.517	ENSPANG00000023172	LSM10	94	65.517	Papio_anubis
ENSORLG00015007794	oscp1a	95	71.304	ENSPKIG00000003728	oscp1a	93	71.304	Paramormyrops_kingsleyae
ENSORLG00015007794	oscp1a	98	63.866	ENSPSIG00000000590	LSM10	97	63.866	Pelodiscus_sinensis
ENSORLG00015007794	oscp1a	64	75.000	ENSPMGG00000015718	oscp1a	99	75.000	Periophthalmus_magnuspinnatus
ENSORLG00015007794	oscp1a	85	70.297	ENSPCIG00000014865	LSM10	74	70.297	Phascolarctos_cinereus
ENSORLG00015007794	oscp1a	92	76.786	ENSPFOG00000020490	oscp1a	95	76.786	Poecilia_formosa
ENSORLG00015007794	oscp1a	92	76.786	ENSPLAG00000016537	oscp1a	85	76.786	Poecilia_latipinna
ENSORLG00015007794	oscp1a	93	72.566	ENSPMEG00000000174	oscp1a	98	72.566	Poecilia_mexicana
ENSORLG00015007794	oscp1a	92	75.000	ENSPREG00000009899	oscp1a	85	75.000	Poecilia_reticulata
ENSORLG00015007794	oscp1a	97	65.254	ENSPPYG00000001539	LSM10	96	65.254	Pongo_abelii
ENSORLG00015007794	oscp1a	97	66.379	ENSPCAG00000002520	LSM10	97	66.379	Procavia_capensis
ENSORLG00015007794	oscp1a	98	67.227	ENSPVAG00000008644	LSM10	97	67.227	Pteropus_vampyrus
ENSORLG00015007794	oscp1a	100	80.992	ENSPNYG00000003138	oscp1a	98	80.992	Pundamilia_nyererei
ENSORLG00015007794	oscp1a	100	74.167	ENSPNAG00000028829	oscp1a	100	74.167	Pygocentrus_nattereri
ENSORLG00015007794	oscp1a	97	64.407	ENSRNOG00000025716	Lsm10	97	64.407	Rattus_norvegicus
ENSORLG00015007794	oscp1a	96	65.517	ENSRBIG00000001561	LSM10	94	65.517	Rhinopithecus_bieti
ENSORLG00015007794	oscp1a	96	65.517	ENSRROG00000011414	LSM10	94	65.517	Rhinopithecus_roxellana
ENSORLG00015007794	oscp1a	97	65.254	ENSSBOG00000036413	-	96	65.254	Saimiri_boliviensis_boliviensis
ENSORLG00015007794	oscp1a	98	68.908	ENSSHAG00000018056	LSM10	97	68.908	Sarcophilus_harrisii
ENSORLG00015007794	oscp1a	98	69.748	ENSSFOG00015019954	lsm10	98	69.748	Scleropages_formosus
ENSORLG00015007794	oscp1a	97	79.487	ENSSMAG00000001297	oscp1a	100	79.487	Scophthalmus_maximus
ENSORLG00015007794	oscp1a	97	75.424	ENSSDUG00000007090	oscp1a	96	75.424	Seriola_dumerili
ENSORLG00015007794	oscp1a	100	75.207	ENSSLDG00000000800	oscp1a	100	75.207	Seriola_lalandi_dorsalis
ENSORLG00015007794	oscp1a	88	69.524	ENSSARG00000004211	LSM10	97	65.289	Sorex_araneus
ENSORLG00015007794	oscp1a	100	76.860	ENSSPAG00000009229	oscp1a	100	76.860	Stegastes_partitus
ENSORLG00015007794	oscp1a	97	66.379	ENSSSCG00000038916	LSM10	96	66.379	Sus_scrofa
ENSORLG00015007794	oscp1a	98	63.025	ENSTGUG00000001600	-	98	63.025	Taeniopygia_guttata
ENSORLG00015007794	oscp1a	98	63.866	ENSTGUG00000001602	-	98	63.866	Taeniopygia_guttata
ENSORLG00015007794	oscp1a	98	74.790	ENSTRUG00000010531	oscp1a	96	74.790	Takifugu_rubripes
ENSORLG00015007794	oscp1a	96	66.379	ENSTBEG00000016674	LSM10	94	66.379	Tupaia_belangeri
ENSORLG00015007794	oscp1a	98	66.387	ENSUAMG00000020265	LSM10	97	66.387	Ursus_americanus
ENSORLG00015007794	oscp1a	98	66.387	ENSUMAG00000001438	LSM10	55	66.387	Ursus_maritimus
ENSORLG00015007794	oscp1a	98	66.387	ENSVVUG00000023209	LSM10	97	66.387	Vulpes_vulpes
ENSORLG00015007794	oscp1a	98	62.393	ENSXETG00000027631	lsm10	97	62.393	Xenopus_tropicalis
ENSORLG00015007794	oscp1a	95	71.304	ENSXCOG00000018776	oscp1a	72	71.304	Xiphophorus_couchianus
ENSORLG00015007794	oscp1a	89	73.148	ENSXMAG00000019963	oscp1a	86	73.148	Xiphophorus_maculatus