EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007797 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 90286 bases
Position: chr8:26972903-27063188
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006876	MMR_HSR1	PF01926.23	5.1e-08	1	1
ENSORLP00015006896	MMR_HSR1	PF01926.23	5.3e-08	1	1
ENSORLP00015006915	MMR_HSR1	PF01926.23	5.3e-08	1	1
ENSORLP00015026237	MMR_HSR1	PF01926.23	5.4e-08	1	1
ENSORLP00015006945	MMR_HSR1	PF01926.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003382	-	3028	-	ENSORLP00015026237	424 (aa)	-	-
ENSORLT00015003396	-	2744	-	ENSORLP00015006915	394 (aa)	-	-
ENSORLT00015003471	-	1002	-	ENSORLP00015006876	333 (aa)	-	-
ENSORLT00015003363	-	4480	-	ENSORLP00015006945	908 (aa)	-	-
ENSORLT00015003436	-	3473	-	ENSORLP00015006896	394 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007797	-	93	39.550	ENSORLG00015003186	sept8b	73	39.490
ENSORLG00015007797	-	97	47.516	ENSORLG00015018204	sept7b	75	47.516
ENSORLG00015007797	-	89	49.000	ENSORLG00015001204	sept4a	66	49.000
ENSORLG00015007797	-	87	48.454	ENSORLG00015005299	SEPT7	67	48.454
ENSORLG00015007797	-	91	70.395	ENSORLG00015006128	sept9a	92	70.395
ENSORLG00015007797	-	79	51.515	ENSORLG00015002602	SEPT4	79	51.515
ENSORLG00015007797	-	89	49.833	ENSORLG00015015192	sept5a	80	49.833
ENSORLG00015007797	-	89	70.847	ENSORLG00015007295	sept3	90	67.857
ENSORLG00015007797	-	87	49.141	ENSORLG00015006412	sept2	82	47.525
ENSORLG00015007797	-	88	39.796	ENSORLG00015013025	sept6	68	39.597
ENSORLG00015007797	-	92	40.777	ENSORLG00015004795	sept8a	73	40.575
ENSORLG00015007797	-	88	50.685	ENSORLG00015022204	sept15	68	50.338
ENSORLG00015007797	-	91	47.712	ENSORLG00015015159	zgc:63587	87	47.712
ENSORLG00015007797	-	91	71.854	ENSORLG00015009324	sept9b	86	71.854
ENSORLG00015007797	-	92	47.249	ENSORLG00015003711	sept5b	83	47.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007797	-	89	66.779	ENSG00000140623	SEPT12	84	66.556	Homo_sapiens
ENSORLG00015007797	-	90	66.667	ENSAMEG00000001746	SEPT12	84	66.667	Ailuropoda_melanoleuca
ENSORLG00015007797	-	97	88.272	ENSATEG00000007502	sept12	97	75.238	Anabas_testudineus
ENSORLG00015007797	-	89	77.288	ENSACAG00000000531	-	93	73.668	Anolis_carolinensis
ENSORLG00015007797	-	90	66.000	ENSANAG00000035914	SEPT12	84	65.894	Aotus_nancymaae
ENSORLG00015007797	-	97	84.568	ENSAMXG00000013711	sept12	87	83.036	Astyanax_mexicanus
ENSORLG00015007797	-	88	67.347	ENSBTAG00000016330	SEPT12	82	66.779	Bos_taurus
ENSORLG00015007797	-	90	68.000	ENSCAFG00000019171	SEPT12	85	67.987	Canis_familiaris
ENSORLG00015007797	-	90	58.667	ENSCAFG00020024938	SEPT12	94	62.825	Canis_lupus_dingo
ENSORLG00015007797	-	88	67.007	ENSCHIG00000013270	SEPT12	85	66.443	Capra_hircus
ENSORLG00015007797	-	91	65.894	ENSTSYG00000008537	SEPT12	86	64.103	Carlito_syrichta
ENSORLG00015007797	-	90	63.211	ENSCAPG00000013691	SEPT12	83	63.245	Cavia_aperea
ENSORLG00015007797	-	90	66.221	ENSCPOG00000011596	SEPT12	83	66.225	Cavia_porcellus
ENSORLG00015007797	-	89	67.003	ENSCCAG00000021929	SEPT12	84	66.556	Cebus_capucinus
ENSORLG00015007797	-	89	67.785	ENSCATG00000033120	SEPT12	84	67.550	Cercocebus_atys
ENSORLG00015007797	-	93	63.722	ENSCLAG00000011397	SEPT12	88	63.438	Chinchilla_lanigera
ENSORLG00015007797	-	89	50.000	ENSCSAG00000008975	SEPT12	84	50.000	Chlorocebus_sabaeus
ENSORLG00015007797	-	97	73.913	ENSCPBG00000026556	SEPT12	93	73.913	Chrysemys_picta_bellii
ENSORLG00015007797	-	86	51.976	ENSCSAVG00000001804	-	100	51.976	Ciona_savignyi
ENSORLG00015007797	-	89	66.779	ENSCANG00000035476	SEPT12	84	66.556	Colobus_angolensis_palliatus
ENSORLG00015007797	-	77	60.294	ENSCGRG00001012476	Sept12	84	60.364	Cricetulus_griseus_chok1gshd
ENSORLG00015007797	-	77	60.294	ENSCGRG00000015421	Sept12	84	60.364	Cricetulus_griseus_crigri
ENSORLG00015007797	-	94	85.256	ENSCSEG00000011498	sept12	94	81.845	Cynoglossus_semilaevis
ENSORLG00015007797	-	97	86.687	ENSDARG00000019191	sept12	99	81.250	Danio_rerio
ENSORLG00015007797	-	90	67.559	ENSDORG00000011984	Sept12	89	64.961	Dipodomys_ordii
ENSORLG00015007797	-	89	56.271	ENSETEG00000016201	SEPT12	86	54.341	Echinops_telfairi
ENSORLG00015007797	-	89	65.424	ENSEBUG00000008442	sept12	57	65.436	Eptatretus_burgeri
ENSORLG00015007797	-	89	56.902	ENSEASG00005000570	SEPT12	87	60.889	Equus_asinus_asinus
ENSORLG00015007797	-	89	65.657	ENSECAG00000018692	SEPT12	78	65.563	Equus_caballus
ENSORLG00015007797	-	52	78.205	ENSEEUG00000011340	-	51	80.263	Erinaceus_europaeus
ENSORLG00015007797	-	91	65.789	ENSFCAG00000029843	SEPT12	84	65.789	Felis_catus
ENSORLG00015007797	-	97	72.755	ENSFALG00000004482	SEPT12	87	72.086	Ficedula_albicollis
ENSORLG00015007797	-	76	63.386	ENSFDAG00000016066	SEPT12	89	63.424	Fukomys_damarensis
ENSORLG00015007797	-	97	91.331	ENSFHEG00000008995	sept12	100	80.250	Fundulus_heteroclitus
ENSORLG00015007797	-	88	86.007	ENSGMOG00000009662	sept12	96	85.235	Gadus_morhua
ENSORLG00015007797	-	85	89.286	ENSGALG00000029027	SEPT12	86	76.333	Gallus_gallus
ENSORLG00015007797	-	97	91.022	ENSGAFG00000005527	sept12	87	91.946	Gambusia_affinis
ENSORLG00015007797	-	97	86.378	ENSGACG00000000503	sept12	96	85.890	Gasterosteus_aculeatus
ENSORLG00015007797	-	97	70.769	ENSGAGG00000016756	SEPT12	93	70.769	Gopherus_agassizii
ENSORLG00015007797	-	91	66.225	ENSGGOG00000007528	SEPT12	84	66.225	Gorilla_gorilla
ENSORLG00015007797	-	90	65.886	ENSHGLG00000014562	SEPT12	85	65.894	Heterocephalus_glaber_female
ENSORLG00015007797	-	90	65.886	ENSHGLG00100000756	SEPT12	85	65.894	Heterocephalus_glaber_male
ENSORLG00015007797	-	97	81.173	ENSIPUG00000015361	sept12	99	74.202	Ictalurus_punctatus
ENSORLG00015007797	-	97	63.665	ENSSTOG00000012312	SEPT12	89	63.692	Ictidomys_tridecemlineatus
ENSORLG00015007797	-	81	67.286	ENSJJAG00000024267	Sept12	87	67.286	Jaculus_jaculus
ENSORLG00015007797	-	97	90.093	ENSKMAG00000006409	sept12	97	89.091	Kryptolebias_marmoratus
ENSORLG00015007797	-	97	85.185	ENSLBEG00000004076	sept12	99	82.184	Labrus_bergylta
ENSORLG00015007797	-	97	82.769	ENSLOCG00000006723	sept12	92	82.175	Lepisosteus_oculatus
ENSORLG00015007797	-	91	63.816	ENSLAFG00000030360	SEPT12	84	63.816	Loxodonta_africana
ENSORLG00015007797	-	89	67.785	ENSMFAG00000043961	SEPT12	84	67.550	Macaca_fascicularis
ENSORLG00015007797	-	89	67.785	ENSMLEG00000019167	SEPT12	84	67.550	Mandrillus_leucophaeus
ENSORLG00015007797	-	97	86.728	ENSMAMG00000003208	sept12	100	73.464	Mastacembelus_armatus
ENSORLG00015007797	-	89	77.027	ENSMGAG00000009617	SEPT12	88	77.027	Meleagris_gallopavo
ENSORLG00015007797	-	90	67.000	ENSMAUG00000013139	Sept12	84	66.997	Mesocricetus_auratus
ENSORLG00015007797	-	89	65.772	ENSMICG00000015913	SEPT12	84	65.677	Microcebus_murinus
ENSORLG00015007797	-	90	68.227	ENSMOCG00000017045	Sept12	84	68.212	Microtus_ochrogaster
ENSORLG00015007797	-	91	65.677	ENSMODG00000006197	SEPT12	85	65.677	Monodelphis_domestica
ENSORLG00015007797	-	97	87.037	ENSMALG00000003054	sept12	99	86.446	Monopterus_albus
ENSORLG00015007797	-	76	64.961	MGP_CAROLIEiJ_G0020416	Sept12	80	64.961	Mus_caroli
ENSORLG00015007797	-	90	67.333	ENSMUSG00000022542	Sept12	91	64.706	Mus_musculus
ENSORLG00015007797	-	76	64.173	MGP_PahariEiJ_G0016124	Sept12	80	64.173	Mus_pahari
ENSORLG00015007797	-	76	64.961	MGP_SPRETEiJ_G0021310	Sept12	80	64.961	Mus_spretus
ENSORLG00015007797	-	90	66.555	ENSMPUG00000014915	SEPT12	83	66.555	Mustela_putorius_furo
ENSORLG00015007797	-	91	64.356	ENSMLUG00000003525	SEPT12	86	64.356	Myotis_lucifugus
ENSORLG00015007797	-	90	65.886	ENSNGAG00000021915	Sept12	84	65.894	Nannospalax_galili
ENSORLG00015007797	-	89	63.423	ENSNLEG00000009906	SEPT12	86	64.570	Nomascus_leucogenys
ENSORLG00015007797	-	66	60.811	ENSMEUG00000003153	SEPT12	98	58.264	Notamacropus_eugenii
ENSORLG00015007797	-	91	66.887	ENSODEG00000013145	SEPT12	84	66.887	Octodon_degus
ENSORLG00015007797	-	90	66.113	ENSOCUG00000008343	SEPT12	84	66.118	Oryctolagus_cuniculus
ENSORLG00015007797	-	97	99.381	ENSORLG00000019251	-	98	97.879	Oryzias_latipes
ENSORLG00015007797	-	97	95.975	ENSOMEG00000002676	-	99	88.862	Oryzias_melastigma
ENSORLG00015007797	-	89	66.779	ENSOGAG00000025966	SEPT12	84	66.667	Otolemur_garnettii
ENSORLG00015007797	-	88	66.667	ENSOARG00000003930	SEPT12	84	66.107	Ovis_aries
ENSORLG00015007797	-	89	66.779	ENSPPAG00000033910	SEPT12	84	66.556	Pan_paniscus
ENSORLG00015007797	-	91	56.908	ENSPPRG00000006622	SEPT12	82	56.908	Panthera_pardus
ENSORLG00015007797	-	91	66.118	ENSPTIG00000015526	SEPT12	84	66.118	Panthera_tigris_altaica
ENSORLG00015007797	-	89	66.779	ENSPTRG00000007728	SEPT12	84	66.556	Pan_troglodytes
ENSORLG00015007797	-	89	67.785	ENSPANG00000022807	SEPT12	84	67.550	Papio_anubis
ENSORLG00015007797	-	97	78.328	ENSPKIG00000019480	sept12	95	73.521	Paramormyrops_kingsleyae
ENSORLG00015007797	-	91	82.085	ENSPKIG00000009934	-	90	82.085	Paramormyrops_kingsleyae
ENSORLG00015007797	-	87	62.799	ENSPSIG00000014795	SEPT12	83	63.481	Pelodiscus_sinensis
ENSORLG00015007797	-	97	73.684	ENSPMGG00000019506	-	100	70.957	Periophthalmus_magnuspinnatus
ENSORLG00015007797	-	89	66.107	ENSPCIG00000026671	SEPT12	85	65.677	Phascolarctos_cinereus
ENSORLG00015007797	-	97	91.022	ENSPFOG00000015822	sept12	96	89.820	Poecilia_formosa
ENSORLG00015007797	-	97	91.049	ENSPLAG00000004719	sept12	96	89.124	Poecilia_latipinna
ENSORLG00015007797	-	97	91.049	ENSPMEG00000022516	sept12	96	89.124	Poecilia_mexicana
ENSORLG00015007797	-	89	67.785	ENSPCOG00000014037	SEPT12	84	67.657	Propithecus_coquereli
ENSORLG00015007797	-	91	66.997	ENSPVAG00000016080	SEPT12	80	66.997	Pteropus_vampyrus
ENSORLG00015007797	-	97	85.185	ENSPNAG00000026381	sept12	88	83.432	Pygocentrus_nattereri
ENSORLG00015007797	-	90	67.333	ENSRNOG00000003137	Sept12	85	67.327	Rattus_norvegicus
ENSORLG00015007797	-	89	66.779	ENSRBIG00000024546	SEPT12	84	66.556	Rhinopithecus_bieti
ENSORLG00015007797	-	89	66.779	ENSRROG00000028781	SEPT12	84	66.556	Rhinopithecus_roxellana
ENSORLG00015007797	-	89	67.797	ENSSBOG00000036170	SEPT12	84	66.887	Saimiri_boliviensis_boliviensis
ENSORLG00015007797	-	89	66.330	ENSSHAG00000007036	SEPT12	82	66.221	Sarcophilus_harrisii
ENSORLG00015007797	-	97	82.353	ENSSFOG00015023684	sept12	96	78.613	Scleropages_formosus
ENSORLG00015007797	-	91	80.719	ENSSFOG00015010148	-	89	80.000	Scleropages_formosus
ENSORLG00015007797	-	97	86.111	ENSSMAG00000015399	sept12	99	73.585	Scophthalmus_maximus
ENSORLG00015007797	-	97	89.506	ENSSDUG00000018368	sept12	99	57.573	Seriola_dumerili
ENSORLG00015007797	-	89	76.431	ENSSPUG00000009703	SEPT12	87	76.431	Sphenodon_punctatus
ENSORLG00015007797	-	88	71.812	ENSTGUG00000003705	SEPT12	100	71.333	Taeniopygia_guttata
ENSORLG00015007797	-	92	84.740	ENSTRUG00000021364	sept12	84	72.265	Takifugu_rubripes
ENSORLG00015007797	-	89	66.107	ENSTTRG00000005489	SEPT12	79	66.107	Tursiops_truncatus
ENSORLG00015007797	-	90	57.333	ENSUMAG00000002994	SEPT12	89	64.706	Ursus_maritimus
ENSORLG00015007797	-	61	60.891	ENSVPAG00000010635	-	76	60.891	Vicugna_pacos
ENSORLG00015007797	-	90	68.000	ENSVVUG00000016536	SEPT12	84	67.987	Vulpes_vulpes
ENSORLG00015007797	-	89	75.166	ENSXETG00000009151	sept12	91	75.166	Xenopus_tropicalis
ENSORLG00015007797	-	97	90.402	ENSXCOG00000007643	sept12	97	87.032	Xiphophorus_couchianus
ENSORLG00015007797	-	97	90.093	ENSXMAG00000012528	sept12	97	75.772	Xiphophorus_maculatus