EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007831 (Gene tree)
Gene ID: -
Gene Symbol: thrap3b
Alias: -
Full Name: thyroid hormone receptor associated protein 3b
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 17546 bases
Position: chr11:9907746-9925291
Accession: ZDB-GENE-040516-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006992	THRAP3_BCLAF1	PF15440.6	5.5e-133	1	1
ENSORLP00015007002	THRAP3_BCLAF1	PF15440.6	5.5e-133	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003277	-	3867	-	ENSORLP00015006992	885 (aa)	-	-
ENSORLT00015003259	-	3980	-	ENSORLP00015007002	885 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007831	thrap3b	93	35.642	ENSORLG00015004215	thrap3a	69	36.489

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007831	thrap3b	94	71.462	ENSAPOG00000001848	thrap3b	94	76.247	Acanthochromis_polyacanthus
ENSORLG00015007831	thrap3b	75	40.476	ENSAPOG00000024453	thrap3a	82	39.610	Acanthochromis_polyacanthus
ENSORLG00015007831	thrap3b	78	74.180	ENSACIG00000015331	thrap3b	94	74.347	Amphilophus_citrinellus
ENSORLG00015007831	thrap3b	75	41.184	ENSAOCG00000014738	thrap3a	80	40.526	Amphiprion_ocellaris
ENSORLG00015007831	thrap3b	94	72.664	ENSAOCG00000015572	thrap3b	93	75.624	Amphiprion_ocellaris
ENSORLG00015007831	thrap3b	94	74.793	ENSAPEG00000021862	thrap3b	93	75.386	Amphiprion_percula
ENSORLG00015007831	thrap3b	75	41.053	ENSAPEG00000005696	thrap3a	80	40.395	Amphiprion_percula
ENSORLG00015007831	thrap3b	93	38.353	ENSATEG00000009618	thrap3a	82	37.971	Anabas_testudineus
ENSORLG00015007831	thrap3b	94	71.882	ENSATEG00000006350	thrap3b	93	71.086	Anabas_testudineus
ENSORLG00015007831	thrap3b	94	73.095	ENSACLG00000004763	thrap3b	93	76.185	Astatotilapia_calliptera
ENSORLG00015007831	thrap3b	94	38.600	ENSACLG00000027851	thrap3a	93	37.527	Astatotilapia_calliptera
ENSORLG00015007831	thrap3b	94	46.827	ENSAMXG00000020877	thrap3b	99	48.354	Astyanax_mexicanus
ENSORLG00015007831	thrap3b	93	36.306	ENSAMXG00000001863	thrap3a	76	37.813	Astyanax_mexicanus
ENSORLG00015007831	thrap3b	94	67.299	ENSCSEG00000010392	thrap3b	94	67.500	Cynoglossus_semilaevis
ENSORLG00015007831	thrap3b	94	73.734	ENSCVAG00000001547	thrap3b	93	73.491	Cyprinodon_variegatus
ENSORLG00015007831	thrap3b	91	50.408	ENSDARG00000098228	thrap3b	99	46.398	Danio_rerio
ENSORLG00015007831	thrap3b	91	54.805	ENSELUG00000007499	thrap3b	92	55.068	Esox_lucius
ENSORLG00015007831	thrap3b	94	42.975	ENSELUG00000017733	thrap3a	97	41.711	Esox_lucius
ENSORLG00015007831	thrap3b	77	64.286	ENSFALG00000000840	THRAP3	50	63.265	Ficedula_albicollis
ENSORLG00015007831	thrap3b	94	72.674	ENSFHEG00000001051	thrap3b	93	72.727	Fundulus_heteroclitus
ENSORLG00015007831	thrap3b	90	34.624	ENSGAFG00000008649	thrap3a	65	36.946	Gambusia_affinis
ENSORLG00015007831	thrap3b	53	72.327	ENSGAFG00000007090	thrap3b	87	70.061	Gambusia_affinis
ENSORLG00015007831	thrap3b	94	61.111	ENSGACG00000002319	thrap3b	93	60.778	Gasterosteus_aculeatus
ENSORLG00015007831	thrap3b	94	73.214	ENSHBUG00000001708	thrap3b	93	74.286	Haplochromis_burtoni
ENSORLG00015007831	thrap3b	98	38.311	ENSHBUG00000009602	thrap3a	96	37.553	Haplochromis_burtoni
ENSORLG00015007831	thrap3b	94	68.677	ENSHCOG00000004098	thrap3b	94	68.187	Hippocampus_comes
ENSORLG00015007831	thrap3b	93	46.844	ENSIPUG00000005707	thrap3b	93	47.232	Ictalurus_punctatus
ENSORLG00015007831	thrap3b	94	74.242	ENSKMAG00000012105	thrap3b	93	74.883	Kryptolebias_marmoratus
ENSORLG00015007831	thrap3b	73	39.751	ENSLBEG00000008813	thrap3a	69	41.131	Labrus_bergylta
ENSORLG00015007831	thrap3b	94	68.839	ENSLBEG00000017803	thrap3b	93	69.905	Labrus_bergylta
ENSORLG00015007831	thrap3b	94	66.234	ENSMAMG00000004348	thrap3b	93	66.352	Mastacembelus_armatus
ENSORLG00015007831	thrap3b	94	72.288	ENSMZEG00005026309	thrap3b	93	76.157	Maylandia_zebra
ENSORLG00015007831	thrap3b	98	38.208	ENSMZEG00005007212	thrap3a	96	37.447	Maylandia_zebra
ENSORLG00015007831	thrap3b	70	37.519	ENSMMOG00000018587	thrap3a	66	39.620	Mola_mola
ENSORLG00015007831	thrap3b	78	68.902	ENSMMOG00000013594	thrap3b	83	69.330	Mola_mola
ENSORLG00015007831	thrap3b	94	71.901	ENSMALG00000012582	thrap3b	93	71.665	Monopterus_albus
ENSORLG00015007831	thrap3b	67	56.667	ENSMALG00000011980	thrap3a	78	36.173	Monopterus_albus
ENSORLG00015007831	thrap3b	78	71.633	ENSNBRG00000014237	thrap3b	97	73.841	Neolamprologus_brichardi
ENSORLG00015007831	thrap3b	92	38.280	ENSONIG00000016278	thrap3a	91	30.135	Oreochromis_niloticus
ENSORLG00015007831	thrap3b	78	72.453	ENSONIG00000013673	thrap3b	93	74.643	Oreochromis_niloticus
ENSORLG00015007831	thrap3b	100	99.209	ENSORLG00000009543	thrap3b	100	99.209	Oryzias_latipes
ENSORLG00015007831	thrap3b	71	38.003	ENSORLG00000014550	thrap3a	69	37.984	Oryzias_latipes
ENSORLG00015007831	thrap3b	71	37.258	ENSORLG00020019116	thrap3a	69	36.641	Oryzias_latipes_hni
ENSORLG00015007831	thrap3b	100	99.097	ENSORLG00020016319	thrap3b	100	99.097	Oryzias_latipes_hni
ENSORLG00015007831	thrap3b	71	37.805	ENSOMEG00000019164	thrap3a	74	52.778	Oryzias_melastigma
ENSORLG00015007831	thrap3b	94	93.157	ENSOMEG00000005716	thrap3b	94	93.157	Oryzias_melastigma
ENSORLG00015007831	thrap3b	73	48.489	ENSPKIG00000005150	thrap3a	96	46.022	Paramormyrops_kingsleyae
ENSORLG00015007831	thrap3b	85	66.667	ENSPMGG00000023429	thrap3b	81	84.211	Periophthalmus_magnuspinnatus
ENSORLG00015007831	thrap3b	94	73.547	ENSPFOG00000000525	thrap3b	94	72.328	Poecilia_formosa
ENSORLG00015007831	thrap3b	90	36.364	ENSPFOG00000013297	thrap3a	76	36.437	Poecilia_formosa
ENSORLG00015007831	thrap3b	94	73.665	ENSPLAG00000016521	thrap3b	94	72.447	Poecilia_latipinna
ENSORLG00015007831	thrap3b	90	36.705	ENSPLAG00000000635	thrap3a	76	36.575	Poecilia_latipinna
ENSORLG00015007831	thrap3b	90	36.436	ENSPMEG00000019022	thrap3a	63	38.562	Poecilia_mexicana
ENSORLG00015007831	thrap3b	94	72.619	ENSPMEG00000009021	thrap3b	94	72.706	Poecilia_mexicana
ENSORLG00015007831	thrap3b	94	75.208	ENSPREG00000009927	thrap3b	94	74.078	Poecilia_reticulata
ENSORLG00015007831	thrap3b	90	37.300	ENSPREG00000005816	thrap3a	72	37.881	Poecilia_reticulata
ENSORLG00015007831	thrap3b	94	68.810	ENSPNYG00000003062	thrap3b	93	68.452	Pundamilia_nyererei
ENSORLG00015007831	thrap3b	94	38.706	ENSPNYG00000013314	thrap3a	93	37.633	Pundamilia_nyererei
ENSORLG00015007831	thrap3b	93	48.639	ENSPNAG00000028762	thrap3b	96	48.588	Pygocentrus_nattereri
ENSORLG00015007831	thrap3b	78	45.328	ENSSFOG00015020057	thrap3	94	45.552	Scleropages_formosus
ENSORLG00015007831	thrap3b	94	70.561	ENSSMAG00000001259	thrap3b	93	72.112	Scophthalmus_maximus
ENSORLG00015007831	thrap3b	77	39.618	ENSSMAG00000003703	thrap3a	78	38.796	Scophthalmus_maximus
ENSORLG00015007831	thrap3b	94	72.340	ENSSDUG00000007054	thrap3b	94	75.296	Seriola_dumerili
ENSORLG00015007831	thrap3b	96	39.017	ENSSDUG00000010132	thrap3a	93	46.667	Seriola_dumerili
ENSORLG00015007831	thrap3b	93	39.590	ENSSLDG00000003306	thrap3a	93	46.667	Seriola_lalandi_dorsalis
ENSORLG00015007831	thrap3b	94	72.931	ENSSLDG00000009210	thrap3b	94	75.887	Seriola_lalandi_dorsalis
ENSORLG00015007831	thrap3b	77	40.674	ENSSPAG00000017651	thrap3a	82	39.820	Stegastes_partitus
ENSORLG00015007831	thrap3b	62	77.975	ENSSPAG00000009248	thrap3b	99	78.508	Stegastes_partitus
ENSORLG00015007831	thrap3b	94	64.852	ENSTRUG00000010336	thrap3b	93	64.566	Takifugu_rubripes
ENSORLG00015007831	thrap3b	97	36.194	ENSTRUG00000010702	thrap3a	65	39.274	Takifugu_rubripes
ENSORLG00015007831	thrap3b	94	56.754	ENSTNIG00000004582	thrap3b	93	56.906	Tetraodon_nigroviridis
ENSORLG00015007831	thrap3b	86	67.355	ENSXCOG00000018772	thrap3b	91	67.141	Xiphophorus_couchianus
ENSORLG00015007831	thrap3b	94	74.171	ENSXMAG00000017962	thrap3b	94	72.835	Xiphophorus_maculatus
ENSORLG00015007831	thrap3b	90	36.583	ENSXMAG00000014797	thrap3a	63	38.550	Xiphophorus_maculatus