EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015007848 (Gene tree)
Gene ID: -
Gene Symbol: rabl6b
Alias: -
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 29001 bases
Position: chr9:27348441-27377441
Accession: 101159360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006953	MMR_HSR1	PF01926.23	8.5e-06	1	1
ENSORLP00015007031	MMR_HSR1	PF01926.23	9.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003219	-	2649	-	ENSORLP00015007031	720 (aa)	-	-
ENSORLT00015003260	-	3804	XM_023958774	ENSORLP00015007003	754 (aa)	XP_023814542	-
ENSORLT00015003350	-	1338	-	ENSORLP00015006953	445 (aa)	-	-
ENSORLT00015003235	-	3813	XM_023958772	ENSORLP00015007023	757 (aa)	XP_023814540	-
ENSORLT00015003290	-	3789	XM_023958777	ENSORLP00015006984	749 (aa)	XP_023814545	-

Gene Model

Click here to download ENSORLG00015007848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007848	rabl6b	89	77.518	ENSACIG00000010721	rabl6b	89	72.511	Amphilophus_citrinellus
ENSORLG00015007848	rabl6b	92	79.580	ENSATEG00000012055	rabl6b	89	78.625	Anabas_testudineus
ENSORLG00015007848	rabl6b	90	72.381	ENSAMXG00000038771	rabl6b	90	61.257	Astyanax_mexicanus
ENSORLG00015007848	rabl6b	91	75.332	ENSCSEG00000016135	rabl6b	89	74.561	Cynoglossus_semilaevis
ENSORLG00015007848	rabl6b	90	78.899	ENSCSEG00000012430	-	95	74.487	Cynoglossus_semilaevis
ENSORLG00015007848	rabl6b	89	67.184	ENSDARG00000077653	rabl6b	99	64.214	Danio_rerio
ENSORLG00015007848	rabl6b	98	73.589	ENSELUG00000004448	rabl6b	98	73.589	Esox_lucius
ENSORLG00015007848	rabl6b	90	83.130	ENSGAFG00000013561	rabl6b	99	76.632	Gambusia_affinis
ENSORLG00015007848	rabl6b	92	78.209	ENSGACG00000005242	rabl6b	89	78.358	Gasterosteus_aculeatus
ENSORLG00015007848	rabl6b	92	79.583	ENSHBUG00000014235	rabl6b	89	79.080	Haplochromis_burtoni
ENSORLG00015007848	rabl6b	89	73.770	ENSIPUG00000019266	rabl6	89	63.676	Ictalurus_punctatus
ENSORLG00015007848	rabl6b	87	56.325	ENSLOCG00000001402	rabl6b	60	60.553	Lepisosteus_oculatus
ENSORLG00015007848	rabl6b	89	80.986	ENSMAMG00000019516	rabl6b	89	74.146	Mastacembelus_armatus
ENSORLG00015007848	rabl6b	79	71.169	ENSMZEG00005003942	rabl6b	99	70.021	Maylandia_zebra
ENSORLG00015007848	rabl6b	79	76.705	ENSMMOG00000009459	rabl6b	97	66.808	Mola_mola
ENSORLG00015007848	rabl6b	93	79.204	ENSMALG00000002029	rabl6b	89	78.338	Monopterus_albus
ENSORLG00015007848	rabl6b	79	70.157	ENSNBRG00000012512	rabl6b	99	69.182	Neolamprologus_brichardi
ENSORLG00015007848	rabl6b	89	83.092	ENSONIG00000010408	rabl6b	89	78.561	Oreochromis_niloticus
ENSORLG00015007848	rabl6b	95	98.682	ENSORLG00020017557	rabl6b	92	98.682	Oryzias_latipes_hni
ENSORLG00015007848	rabl6b	92	91.855	ENSOMEG00000022840	rabl6b	99	90.698	Oryzias_melastigma
ENSORLG00015007848	rabl6b	89	69.284	ENSPKIG00000007459	RABL6	87	65.770	Paramormyrops_kingsleyae
ENSORLG00015007848	rabl6b	87	67.898	ENSPCIG00000023722	RABL6	92	58.873	Phascolarctos_cinereus
ENSORLG00015007848	rabl6b	92	79.732	ENSPFOG00000003250	rabl6b	89	79.674	Poecilia_formosa
ENSORLG00015007848	rabl6b	92	79.583	ENSPLAG00000019562	rabl6b	89	79.525	Poecilia_latipinna
ENSORLG00015007848	rabl6b	92	79.732	ENSPMEG00000020472	rabl6b	89	79.674	Poecilia_mexicana
ENSORLG00015007848	rabl6b	92	79.852	ENSPREG00000014116	rabl6b	94	79.792	Poecilia_reticulata
ENSORLG00015007848	rabl6b	89	72.639	ENSPNAG00000010857	rabl6b	96	63.686	Pygocentrus_nattereri
ENSORLG00015007848	rabl6b	88	71.631	ENSSFOG00015013414	-	88	64.531	Scleropages_formosus
ENSORLG00015007848	rabl6b	89	77.273	ENSSFOG00015017388	RABL6	90	66.423	Scleropages_formosus
ENSORLG00015007848	rabl6b	91	78.378	ENSSMAG00000012543	rabl6b	96	77.712	Scophthalmus_maximus
ENSORLG00015007848	rabl6b	91	79.910	ENSSDUG00000006564	rabl6b	89	79.228	Seriola_dumerili
ENSORLG00015007848	rabl6b	92	81.037	ENSSPAG00000021033	rabl6b	96	80.535	Stegastes_partitus
ENSORLG00015007848	rabl6b	95	72.560	ENSTNIG00000010595	rabl6b	94	73.508	Tetraodon_nigroviridis