EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007869 (Gene tree)
Gene ID: -
Gene Symbol: rab12
Alias: -
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 12449 bases
Position: chr17:5260933-5273381
Accession: ZDB-GENE-050522-555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015026309	MMR_HSR1	PF01926.23	6.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003195	-	3546	-	ENSORLP00015026309	242 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007869	rab12	62	37.179	ENSORLG00015013453	-	64	37.179
ENSORLG00015007869	rab12	84	38.208	ENSORLG00015016999	RAB11B	75	43.636
ENSORLG00015007869	rab12	67	30.247	ENSORLG00015006780	-	87	30.247
ENSORLG00015007869	rab12	68	35.714	ENSORLG00015015121	si:dkey-13a21.4	81	35.714
ENSORLG00015007869	rab12	76	39.785	ENSORLG00015004273	rab42a	85	39.785
ENSORLG00015007869	rab12	65	32.099	ENSORLG00015011467	kras	91	32.000
ENSORLG00015007869	rab12	80	35.859	ENSORLG00015015327	rab33a	59	39.634
ENSORLG00015007869	rab12	69	34.731	ENSORLG00015014268	rabl2	72	33.533
ENSORLG00015007869	rab12	71	47.093	ENSORLG00015020972	rab30	84	47.093
ENSORLG00015007869	rab12	83	38.916	ENSORLG00015019569	rab25b	86	41.618
ENSORLG00015007869	rab12	80	47.423	ENSORLG00015010986	rab1ab	83	50.296
ENSORLG00015007869	rab12	84	44.828	ENSORLG00015000618	-	83	50.296
ENSORLG00015007869	rab12	83	37.000	ENSORLG00015006162	rab6a	76	40.625
ENSORLG00015007869	rab12	67	47.561	ENSORLG00015007182	rab18b	79	47.561
ENSORLG00015007869	rab12	83	34.434	ENSORLG00015000142	si:dkey-34d22.5	72	40.252
ENSORLG00015007869	rab12	66	36.585	ENSORLG00015014829	rab34a	61	36.585
ENSORLG00015007869	rab12	81	34.171	ENSORLG00015002344	-	81	37.278
ENSORLG00015007869	rab12	80	47.500	ENSORLG00015014594	rab3db	92	47.291
ENSORLG00015007869	rab12	72	38.857	ENSORLG00015006970	rab6ba	84	38.857
ENSORLG00015007869	rab12	74	42.778	ENSORLG00015010042	rab35b	89	42.541
ENSORLG00015007869	rab12	65	32.075	ENSORLG00015001298	rhebl1	85	32.075
ENSORLG00015007869	rab12	84	39.437	ENSORLG00015010257	rab11a	95	39.713
ENSORLG00015007869	rab12	71	37.572	ENSORLG00015017737	rab5ab	78	37.572
ENSORLG00015007869	rab12	67	47.561	ENSORLG00015004739	rab18a	79	47.561
ENSORLG00015007869	rab12	73	38.624	ENSORLG00015012872	rab33ba	84	37.745
ENSORLG00015007869	rab12	69	31.737	ENSORLG00015002191	rheb	89	31.737
ENSORLG00015007869	rab12	65	36.250	ENSORLG00015000584	rab34b	58	35.625
ENSORLG00015007869	rab12	84	38.350	ENSORLG00015012725	rab25a	67	38.350
ENSORLG00015007869	rab12	84	36.893	ENSORLG00015019591	rab11al	77	41.916
ENSORLG00015007869	rab12	83	39.303	ENSORLG00015016946	rab11ba	62	43.030
ENSORLG00015007869	rab12	76	39.683	ENSORLG00015016047	zgc:101559	79	39.683
ENSORLG00015007869	rab12	81	38.579	ENSORLG00015000893	-	80	41.040
ENSORLG00015007869	rab12	75	40.984	ENSORLG00015013564	-	83	40.437
ENSORLG00015007869	rab12	69	41.765	ENSORLG00015022289	-	79	41.765
ENSORLG00015007869	rab12	77	37.895	ENSORLG00015006820	-	82	37.278
ENSORLG00015007869	rab12	68	42.515	ENSORLG00015003202	RAB39B	78	42.515
ENSORLG00015007869	rab12	77	35.938	ENSORLG00015020441	-	91	36.170
ENSORLG00015007869	rab12	66	40.252	ENSORLG00015013537	rab6bb	75	41.026
ENSORLG00015007869	rab12	52	31.206	ENSORLG00015004486	rasl10a	69	31.206
ENSORLG00015007869	rab12	73	42.373	ENSORLG00015004377	RAB15	83	43.353
ENSORLG00015007869	rab12	62	31.788	ENSORLG00015003353	zgc:55558	87	31.707
ENSORLG00015007869	rab12	66	35.625	ENSORLG00015010289	rras	91	33.889
ENSORLG00015007869	rab12	71	50.000	ENSORLG00015015518	-	86	50.000
ENSORLG00015007869	rab12	71	37.791	ENSORLG00015021900	rab5c	77	37.791
ENSORLG00015007869	rab12	88	30.093	ENSORLG00015004265	rab9b	85	33.333
ENSORLG00015007869	rab12	86	36.792	ENSORLG00015006881	rab14	80	40.462
ENSORLG00015007869	rab12	77	33.505	ENSORLG00015004033	rab23	78	35.185
ENSORLG00015007869	rab12	66	38.750	ENSORLG00015012854	rab5aa	77	37.500
ENSORLG00015007869	rab12	76	38.798	ENSORLG00015010161	RAB41	78	38.798
ENSORLG00015007869	rab12	64	31.210	ENSORLG00015008252	si:ch73-116o1.2	80	31.548
ENSORLG00015007869	rab12	79	40.625	ENSORLG00015020900	rab2a	92	40.816
ENSORLG00015007869	rab12	84	38.426	ENSORLG00015020173	rab11bb	75	43.636
ENSORLG00015007869	rab12	71	47.093	ENSORLG00015010098	zgc:171927	80	47.093
ENSORLG00015007869	rab12	71	45.029	ENSORLG00015013638	rab15	80	45.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007869	rab12	100	79.918	ENSG00000206418	RAB12	100	83.197	Homo_sapiens
ENSORLG00015007869	rab12	90	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSORLG00015007869	rab12	100	96.311	ENSACIG00000020616	rab12	100	96.311	Amphilophus_citrinellus
ENSORLG00015007869	rab12	100	94.239	ENSAOCG00000002130	rab12	100	95.885	Amphiprion_ocellaris
ENSORLG00015007869	rab12	100	94.239	ENSAPEG00000013255	rab12	100	95.885	Amphiprion_percula
ENSORLG00015007869	rab12	100	96.281	ENSATEG00000019683	rab12	100	96.281	Anabas_testudineus
ENSORLG00015007869	rab12	90	84.932	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSORLG00015007869	rab12	100	97.531	ENSACLG00000007696	rab12	100	97.531	Astatotilapia_calliptera
ENSORLG00015007869	rab12	100	88.618	ENSAMXG00000004882	rab12	100	89.431	Astyanax_mexicanus
ENSORLG00015007869	rab12	93	84.000	ENSBTAG00000010356	RAB12	100	83.607	Bos_taurus
ENSORLG00015007869	rab12	93	84.513	ENSCJAG00000015468	RAB12	72	84.082	Callithrix_jacchus
ENSORLG00015007869	rab12	93	83.556	ENSCAFG00020023721	RAB12	84	83.197	Canis_lupus_dingo
ENSORLG00015007869	rab12	93	84.000	ENSCHIG00000016103	RAB12	100	83.607	Capra_hircus
ENSORLG00015007869	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSORLG00015007869	rab12	100	80.816	ENSCCAG00000022862	RAB12	100	84.082	Cebus_capucinus
ENSORLG00015007869	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSORLG00015007869	rab12	84	88.780	ENSCSAG00000017569	RAB12	64	87.892	Chlorocebus_sabaeus
ENSORLG00015007869	rab12	93	83.628	ENSCPBG00000028375	RAB12	100	83.265	Chrysemys_picta_bellii
ENSORLG00015007869	rab12	90	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSORLG00015007869	rab12	93	83.628	ENSCGRG00001006958	Rab12	83	82.857	Cricetulus_griseus_chok1gshd
ENSORLG00015007869	rab12	100	94.239	ENSCSEG00000016933	rab12	100	95.885	Cynoglossus_semilaevis
ENSORLG00015007869	rab12	100	95.935	ENSCVAG00000003539	rab12	100	95.935	Cyprinodon_variegatus
ENSORLG00015007869	rab12	100	89.256	ENSDARG00000089428	rab12	94	94.545	Danio_rerio
ENSORLG00015007869	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSORLG00015007869	rab12	93	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSORLG00015007869	rab12	75	67.582	ENSEBUG00000006581	rab12	89	67.582	Eptatretus_burgeri
ENSORLG00015007869	rab12	93	83.628	ENSEASG00005002926	RAB12	83	83.265	Equus_asinus_asinus
ENSORLG00015007869	rab12	93	83.628	ENSECAG00000007384	RAB12	71	83.265	Equus_caballus
ENSORLG00015007869	rab12	100	90.083	ENSELUG00000007123	rab12	100	88.017	Esox_lucius
ENSORLG00015007869	rab12	93	83.556	ENSFCAG00000027710	RAB12	72	83.197	Felis_catus
ENSORLG00015007869	rab12	100	95.918	ENSFHEG00000004319	rab12	100	95.918	Fundulus_heteroclitus
ENSORLG00015007869	rab12	86	91.827	ENSGMOG00000012335	rab12	87	89.904	Gadus_morhua
ENSORLG00015007869	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSORLG00015007869	rab12	97	86.383	ENSGACG00000016639	rab12	100	93.088	Gasterosteus_aculeatus
ENSORLG00015007869	rab12	93	83.186	ENSGAGG00000007278	RAB12	100	82.857	Gopherus_agassizii
ENSORLG00015007869	rab12	100	97.531	ENSHBUG00000008497	rab12	100	97.531	Haplochromis_burtoni
ENSORLG00015007869	rab12	93	82.018	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSORLG00015007869	rab12	100	90.535	ENSHCOG00000012376	rab12	100	90.123	Hippocampus_comes
ENSORLG00015007869	rab12	91	94.118	ENSIPUG00000017401	rab12	90	94.091	Ictalurus_punctatus
ENSORLG00015007869	rab12	94	81.304	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSORLG00015007869	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSORLG00015007869	rab12	100	93.388	ENSKMAG00000020056	rab12	100	92.149	Kryptolebias_marmoratus
ENSORLG00015007869	rab12	100	95.868	ENSLBEG00000013756	rab12	100	95.868	Labrus_bergylta
ENSORLG00015007869	rab12	91	87.892	ENSLACG00000010461	RAB12	90	87.892	Latimeria_chalumnae
ENSORLG00015007869	rab12	100	82.661	ENSLOCG00000002680	rab12	100	86.290	Lepisosteus_oculatus
ENSORLG00015007869	rab12	100	80.081	ENSMFAG00000043551	RAB12	91	87.892	Macaca_fascicularis
ENSORLG00015007869	rab12	84	88.780	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSORLG00015007869	rab12	100	96.281	ENSMAMG00000006862	rab12	100	96.281	Mastacembelus_armatus
ENSORLG00015007869	rab12	100	97.531	ENSMZEG00005024316	rab12	100	97.531	Maylandia_zebra
ENSORLG00015007869	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSORLG00015007869	rab12	93	83.628	ENSMAUG00000008371	Rab12	83	82.857	Mesocricetus_auratus
ENSORLG00015007869	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSORLG00015007869	rab12	90	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSORLG00015007869	rab12	86	88.517	ENSMODG00000021452	RAB12	66	88.341	Monodelphis_domestica
ENSORLG00015007869	rab12	100	93.388	ENSMALG00000015762	rab12	100	93.388	Monopterus_albus
ENSORLG00015007869	rab12	93	85.398	MGP_CAROLIEiJ_G0021839	Rab12	84	84.490	Mus_caroli
ENSORLG00015007869	rab12	93	85.398	ENSMUSG00000023460	Rab12	100	84.490	Mus_musculus
ENSORLG00015007869	rab12	93	85.398	MGP_PahariEiJ_G0020826	Rab12	100	84.490	Mus_pahari
ENSORLG00015007869	rab12	93	85.398	MGP_SPRETEiJ_G0022750	Rab12	83	84.490	Mus_spretus
ENSORLG00015007869	rab12	100	80.000	ENSMLUG00000002883	RAB12	92	87.892	Myotis_lucifugus
ENSORLG00015007869	rab12	91	77.232	ENSNGAG00000019722	-	91	77.130	Nannospalax_galili
ENSORLG00015007869	rab12	96	81.277	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSORLG00015007869	rab12	100	97.531	ENSNBRG00000014428	rab12	100	97.531	Neolamprologus_brichardi
ENSORLG00015007869	rab12	100	79.508	ENSNLEG00000006939	RAB12	100	82.787	Nomascus_leucogenys
ENSORLG00015007869	rab12	100	80.894	ENSMEUG00000000493	RAB12	91	88.341	Notamacropus_eugenii
ENSORLG00015007869	rab12	90	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSORLG00015007869	rab12	100	97.119	ENSONIG00000018469	rab12	100	97.119	Oreochromis_niloticus
ENSORLG00015007869	rab12	100	99.587	ENSORLG00000003902	rab12	100	99.587	Oryzias_latipes
ENSORLG00015007869	rab12	100	99.174	ENSORLG00020005131	rab12	100	99.174	Oryzias_latipes_hni
ENSORLG00015007869	rab12	100	98.760	ENSOMEG00000008191	rab12	100	98.760	Oryzias_melastigma
ENSORLG00015007869	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSORLG00015007869	rab12	79	89.529	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSORLG00015007869	rab12	85	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSORLG00015007869	rab12	100	79.918	ENSPPRG00000024521	RAB12	100	83.197	Panthera_pardus
ENSORLG00015007869	rab12	100	79.918	ENSPTRG00000009853	RAB12	100	83.197	Pan_troglodytes
ENSORLG00015007869	rab12	100	80.162	ENSPANG00000009320	RAB12	90	88.341	Papio_anubis
ENSORLG00015007869	rab12	100	88.477	ENSPKIG00000008579	rab12	100	88.477	Paramormyrops_kingsleyae
ENSORLG00015007869	rab12	100	90.496	ENSPMGG00000001890	rab12	100	90.496	Periophthalmus_magnuspinnatus
ENSORLG00015007869	rab12	93	84.071	ENSPEMG00000021032	Rab12	84	83.265	Peromyscus_maniculatus_bairdii
ENSORLG00015007869	rab12	93	84.581	ENSPCIG00000010453	RAB12	56	88.341	Phascolarctos_cinereus
ENSORLG00015007869	rab12	100	93.852	ENSPFOG00000001579	rab12	100	93.852	Poecilia_formosa
ENSORLG00015007869	rab12	100	93.852	ENSPLAG00000013594	rab12	100	93.852	Poecilia_latipinna
ENSORLG00015007869	rab12	100	93.852	ENSPMEG00000010417	rab12	100	93.852	Poecilia_mexicana
ENSORLG00015007869	rab12	100	93.852	ENSPREG00000017487	rab12	100	94.262	Poecilia_reticulata
ENSORLG00015007869	rab12	93	83.556	ENSPPYG00000009015	-	72	83.197	Pongo_abelii
ENSORLG00015007869	rab12	100	79.508	ENSPCAG00000015007	RAB12	100	82.787	Procavia_capensis
ENSORLG00015007869	rab12	100	79.918	ENSPCOG00000019816	RAB12	100	83.197	Propithecus_coquereli
ENSORLG00015007869	rab12	100	79.508	ENSPVAG00000002757	RAB12	100	82.787	Pteropus_vampyrus
ENSORLG00015007869	rab12	100	97.531	ENSPNYG00000023905	rab12	100	97.531	Pundamilia_nyererei
ENSORLG00015007869	rab12	100	97.531	ENSPNYG00000005654	rab12	100	97.531	Pundamilia_nyererei
ENSORLG00015007869	rab12	100	87.805	ENSPNAG00000015031	rab12	100	88.618	Pygocentrus_nattereri
ENSORLG00015007869	rab12	93	82.379	ENSRNOG00000019295	Rab12	91	81.938	Rattus_norvegicus
ENSORLG00015007869	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSORLG00015007869	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSORLG00015007869	rab12	95	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSORLG00015007869	rab12	93	84.071	ENSSHAG00000001489	RAB12	90	88.670	Sarcophilus_harrisii
ENSORLG00015007869	rab12	100	95.041	ENSSMAG00000012678	rab12	100	95.041	Scophthalmus_maximus
ENSORLG00015007869	rab12	100	97.107	ENSSDUG00000008505	rab12	100	97.107	Seriola_dumerili
ENSORLG00015007869	rab12	100	97.107	ENSSLDG00000022239	rab12	100	97.107	Seriola_lalandi_dorsalis
ENSORLG00015007869	rab12	97	83.544	ENSSPUG00000003222	RAB12	91	88.789	Sphenodon_punctatus
ENSORLG00015007869	rab12	100	94.650	ENSSPAG00000010822	rab12	100	96.296	Stegastes_partitus
ENSORLG00015007869	rab12	93	83.556	ENSSSCG00000038026	RAB12	100	83.607	Sus_scrofa
ENSORLG00015007869	rab12	86	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSORLG00015007869	rab12	100	92.975	ENSTRUG00000024455	rab12	100	92.975	Takifugu_rubripes
ENSORLG00015007869	rab12	100	93.802	ENSTNIG00000014859	rab12	100	93.802	Tetraodon_nigroviridis
ENSORLG00015007869	rab12	90	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSORLG00015007869	rab12	100	79.918	ENSUAMG00000018092	RAB12	100	83.197	Ursus_americanus
ENSORLG00015007869	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSORLG00015007869	rab12	93	84.279	ENSXETG00000004289	rab12	72	89.286	Xenopus_tropicalis
ENSORLG00015007869	rab12	100	92.623	ENSXCOG00000019310	rab12	100	93.033	Xiphophorus_couchianus
ENSORLG00015007869	rab12	100	93.033	ENSXMAG00000023617	rab12	100	93.443	Xiphophorus_maculatus