EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015007946 (Gene tree)
Gene ID: -
Gene Symbol: ern1
Alias: -
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 15914 bases
Position: chr8:12367297-12383210
Accession: ZDB-GENE-050522-431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015006939	Ribonuc_2-5A	PF06479.12	1.2e-41	1	1
ENSORLP00015026235	Ribonuc_2-5A	PF06479.12	1.2e-41	1	1
ENSORLP00015006983	Ribonuc_2-5A	PF06479.12	1.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015003289	-	4807	-	ENSORLP00015006983	1070 (aa)	-	-
ENSORLT00015003390	-	3129	-	ENSORLP00015026235	1042 (aa)	-	-
ENSORLT00015003370	-	3108	-	ENSORLP00015006939	1035 (aa)	-	-

Gene Model

Click here to download ENSORLG00015007946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015007946's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015007946	ern1	87	55.301	ENSORLG00015011995	ern2	99	55.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015007946	ern1	99	84.888	ENSAPOG00000009999	ern1	98	84.888	Acanthochromis_polyacanthus
ENSORLG00015007946	ern1	99	86.132	ENSACIG00000021716	ern1	97	86.213	Amphilophus_citrinellus
ENSORLG00015007946	ern1	99	85.940	ENSAOCG00000012309	ern1	98	85.940	Amphiprion_ocellaris
ENSORLG00015007946	ern1	99	85.568	ENSAPEG00000011263	ern1	98	91.243	Amphiprion_percula
ENSORLG00015007946	ern1	100	85.542	ENSATEG00000024468	ern1	98	85.542	Anabas_testudineus
ENSORLG00015007946	ern1	99	86.124	ENSACLG00000027919	ern1	99	86.124	Astatotilapia_calliptera
ENSORLG00015007946	ern1	97	78.592	ENSAMXG00000000944	ern1	93	83.144	Astyanax_mexicanus
ENSORLG00015007946	ern1	95	84.533	ENSCSEG00000014500	ern1	99	84.698	Cynoglossus_semilaevis
ENSORLG00015007946	ern1	94	86.922	ENSCVAG00000002988	ern1	96	86.922	Cyprinodon_variegatus
ENSORLG00015007946	ern1	90	80.619	ENSDARG00000013997	ern1	100	80.893	Danio_rerio
ENSORLG00015007946	ern1	90	80.000	ENSELUG00000005957	ern1	93	80.206	Esox_lucius
ENSORLG00015007946	ern1	99	83.412	ENSFHEG00000005578	ern1	99	82.977	Fundulus_heteroclitus
ENSORLG00015007946	ern1	87	84.362	ENSGMOG00000011232	ern1	100	84.362	Gadus_morhua
ENSORLG00015007946	ern1	100	83.970	ENSGAFG00000020231	ern1	99	83.970	Gambusia_affinis
ENSORLG00015007946	ern1	88	87.474	ENSGACG00000011700	ern1	99	87.474	Gasterosteus_aculeatus
ENSORLG00015007946	ern1	98	86.351	ENSHBUG00000012581	ern1	98	86.351	Haplochromis_burtoni
ENSORLG00015007946	ern1	100	80.519	ENSHCOG00000016199	ern1	92	87.185	Hippocampus_comes
ENSORLG00015007946	ern1	91	82.854	ENSIPUG00000011083	ern1	94	82.854	Ictalurus_punctatus
ENSORLG00015007946	ern1	100	83.784	ENSKMAG00000019499	ern1	98	83.784	Kryptolebias_marmoratus
ENSORLG00015007946	ern1	98	82.015	ENSLBEG00000025907	ern1	98	82.015	Labrus_bergylta
ENSORLG00015007946	ern1	100	85.037	ENSMAMG00000023439	ern1	98	85.157	Mastacembelus_armatus
ENSORLG00015007946	ern1	99	86.124	ENSMZEG00005003221	ern1	99	86.124	Maylandia_zebra
ENSORLG00015007946	ern1	91	87.179	ENSMMOG00000007650	ern1	97	87.179	Mola_mola
ENSORLG00015007946	ern1	100	83.395	ENSMALG00000017775	ern1	96	83.395	Monopterus_albus
ENSORLG00015007946	ern1	98	86.256	ENSNBRG00000002179	ern1	98	86.256	Neolamprologus_brichardi
ENSORLG00015007946	ern1	88	90.350	ENSONIG00000017169	ern1	98	90.350	Oreochromis_niloticus
ENSORLG00015007946	ern1	100	98.973	ENSORLG00000008940	ern1	100	98.973	Oryzias_latipes
ENSORLG00015007946	ern1	100	98.880	ENSORLG00020018387	ern1	100	98.880	Oryzias_latipes_hni
ENSORLG00015007946	ern1	100	95.336	ENSOMEG00000011741	ern1	100	95.336	Oryzias_melastigma
ENSORLG00015007946	ern1	89	81.400	ENSPKIG00000005593	ern1	97	81.400	Paramormyrops_kingsleyae
ENSORLG00015007946	ern1	93	86.427	ENSPMGG00000020442	ern1	96	86.332	Periophthalmus_magnuspinnatus
ENSORLG00015007946	ern1	99	85.405	ENSPFOG00000007378	ern1	98	84.536	Poecilia_formosa
ENSORLG00015007946	ern1	100	84.601	ENSPLAG00000014780	ern1	99	83.749	Poecilia_latipinna
ENSORLG00015007946	ern1	100	84.787	ENSPMEG00000016324	ern1	99	83.977	Poecilia_mexicana
ENSORLG00015007946	ern1	100	84.508	ENSPREG00000006286	ern1	99	83.657	Poecilia_reticulata
ENSORLG00015007946	ern1	99	86.216	ENSPNYG00000017929	ern1	98	89.020	Pundamilia_nyererei
ENSORLG00015007946	ern1	97	78.578	ENSPNAG00000029447	ern1	99	78.952	Pygocentrus_nattereri
ENSORLG00015007946	ern1	99	84.201	ENSSMAG00000015042	ern1	98	84.201	Scophthalmus_maximus
ENSORLG00015007946	ern1	100	86.494	ENSSDUG00000009098	ern1	98	86.494	Seriola_dumerili
ENSORLG00015007946	ern1	100	86.216	ENSSLDG00000023254	ern1	98	86.216	Seriola_lalandi_dorsalis
ENSORLG00015007946	ern1	99	85.341	ENSSPAG00000017539	ern1	98	85.341	Stegastes_partitus
ENSORLG00015007946	ern1	96	82.685	ENSTRUG00000001041	ern1	98	82.393	Takifugu_rubripes
ENSORLG00015007946	ern1	87	89.282	ENSTNIG00000017990	ern1	98	88.948	Tetraodon_nigroviridis
ENSORLG00015007946	ern1	91	88.900	ENSXCOG00000010330	ern1	95	89.349	Xiphophorus_couchianus
ENSORLG00015007946	ern1	100	83.719	ENSXMAG00000001310	ern1	99	82.873	Xiphophorus_maculatus