EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015008005 (Gene tree)
Gene ID: -
Gene Symbol: sbds
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 7090 bases
Position: chr13:3610901-3617990
Accession: ZDB-GENE-040426-1116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015007169	SBDS	PF01172.18	5.5e-35	1	1
ENSORLP00015007169	SBDS_C	PF09377.10	1.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015002976	-	4552	-	ENSORLP00015007169	249 (aa)	-	-

Gene Model

Click here to download ENSORLG00015008005's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015008005's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015008005	sbds	100	79.920	ENSG00000126524	SBDS	97	84.337	Homo_sapiens
ENSORLG00015008005	sbds	100	91.165	ENSAPOG00000014285	sbds	100	91.165	Acanthochromis_polyacanthus
ENSORLG00015008005	sbds	100	79.920	ENSAMEG00000018167	SBDS	99	79.920	Ailuropoda_melanoleuca
ENSORLG00015008005	sbds	100	91.667	ENSACIG00000007308	sbds	100	91.667	Amphilophus_citrinellus
ENSORLG00015008005	sbds	100	91.566	ENSAOCG00000016770	sbds	100	91.566	Amphiprion_ocellaris
ENSORLG00015008005	sbds	100	91.566	ENSAPEG00000015897	sbds	100	91.566	Amphiprion_percula
ENSORLG00015008005	sbds	100	91.165	ENSATEG00000006901	sbds	100	91.165	Anabas_testudineus
ENSORLG00015008005	sbds	83	78.641	ENSANAG00000037501	-	99	78.641	Aotus_nancymaae
ENSORLG00015008005	sbds	93	75.758	ENSANAG00000024342	-	97	75.758	Aotus_nancymaae
ENSORLG00015008005	sbds	100	92.771	ENSACLG00000018750	sbds	100	92.771	Astatotilapia_calliptera
ENSORLG00015008005	sbds	100	85.944	ENSAMXG00000005361	sbds	99	85.944	Astyanax_mexicanus
ENSORLG00015008005	sbds	100	80.321	ENSBTAG00000004051	SBDS	99	80.321	Bos_taurus
ENSORLG00015008005	sbds	98	59.350	WBGene00021063	sbds-1	97	59.350	Caenorhabditis_elegans
ENSORLG00015008005	sbds	100	79.920	ENSCJAG00000041007	SBDS	99	79.920	Callithrix_jacchus
ENSORLG00015008005	sbds	100	78.486	ENSCAFG00000010797	SBDS	99	78.486	Canis_familiaris
ENSORLG00015008005	sbds	100	79.920	ENSCAFG00020005357	SBDS	99	79.920	Canis_lupus_dingo
ENSORLG00015008005	sbds	100	80.321	ENSCHIG00000026854	SBDS	99	80.321	Capra_hircus
ENSORLG00015008005	sbds	100	79.920	ENSTSYG00000033822	SBDS	99	79.920	Carlito_syrichta
ENSORLG00015008005	sbds	65	79.141	ENSCAPG00000006634	SBDS	99	79.141	Cavia_aperea
ENSORLG00015008005	sbds	100	81.124	ENSCPOG00000036143	SBDS	99	81.124	Cavia_porcellus
ENSORLG00015008005	sbds	100	79.920	ENSCCAG00000020671	SBDS	99	79.920	Cebus_capucinus
ENSORLG00015008005	sbds	100	79.920	ENSCATG00000039026	SBDS	99	79.920	Cercocebus_atys
ENSORLG00015008005	sbds	100	81.526	ENSCLAG00000005721	-	99	81.526	Chinchilla_lanigera
ENSORLG00015008005	sbds	99	56.452	ENSCLAG00000002113	-	99	56.452	Chinchilla_lanigera
ENSORLG00015008005	sbds	100	79.920	ENSCSAG00000018275	SBDS	99	79.920	Chlorocebus_sabaeus
ENSORLG00015008005	sbds	100	75.502	ENSCHOG00000003795	SBDS	99	75.502	Choloepus_hoffmanni
ENSORLG00015008005	sbds	100	83.936	ENSCPBG00000014893	SBDS	99	83.936	Chrysemys_picta_bellii
ENSORLG00015008005	sbds	99	68.548	ENSCSAVG00000011811	-	99	68.548	Ciona_savignyi
ENSORLG00015008005	sbds	100	79.518	ENSCANG00000032368	SBDS	99	79.518	Colobus_angolensis_palliatus
ENSORLG00015008005	sbds	65	79.141	ENSCGRG00001019886	Sbds	99	79.141	Cricetulus_griseus_chok1gshd
ENSORLG00015008005	sbds	83	80.097	ENSCGRG00000009211	Sbds	99	80.097	Cricetulus_griseus_crigri
ENSORLG00015008005	sbds	100	89.157	ENSCSEG00000005798	sbds	100	89.157	Cynoglossus_semilaevis
ENSORLG00015008005	sbds	100	90.763	ENSCVAG00000001053	sbds	100	90.763	Cyprinodon_variegatus
ENSORLG00015008005	sbds	100	82.731	ENSDARG00000027803	sbds	99	82.731	Danio_rerio
ENSORLG00015008005	sbds	100	79.920	ENSDNOG00000041174	SBDS	99	79.920	Dasypus_novemcinctus
ENSORLG00015008005	sbds	100	81.928	ENSDORG00000026218	Sbds	99	81.928	Dipodomys_ordii
ENSORLG00015008005	sbds	91	62.281	FBgn0035714	CG8549	98	61.538	Drosophila_melanogaster
ENSORLG00015008005	sbds	93	59.914	ENSEBUG00000015780	sbds	99	59.914	Eptatretus_burgeri
ENSORLG00015008005	sbds	100	79.920	ENSEASG00005008821	SBDS	99	79.920	Equus_asinus_asinus
ENSORLG00015008005	sbds	100	79.920	ENSECAG00000008202	SBDS	99	79.920	Equus_caballus
ENSORLG00015008005	sbds	84	61.538	ENSEEUG00000004768	SBDS	95	62.944	Erinaceus_europaeus
ENSORLG00015008005	sbds	100	85.944	ENSELUG00000008382	sbds	99	85.944	Esox_lucius
ENSORLG00015008005	sbds	100	79.920	ENSFCAG00000022142	SBDS	99	79.920	Felis_catus
ENSORLG00015008005	sbds	100	84.337	ENSFALG00000013808	SBDS	99	84.337	Ficedula_albicollis
ENSORLG00015008005	sbds	100	81.124	ENSFDAG00000018947	-	99	81.124	Fukomys_damarensis
ENSORLG00015008005	sbds	100	87.952	ENSFHEG00000000708	sbds	100	87.952	Fundulus_heteroclitus
ENSORLG00015008005	sbds	100	86.747	ENSGMOG00000018356	sbds	99	86.747	Gadus_morhua
ENSORLG00015008005	sbds	100	81.124	ENSGALG00000027989	SBDS	99	81.124	Gallus_gallus
ENSORLG00015008005	sbds	92	88.261	ENSGAFG00000014204	sbds	100	88.261	Gambusia_affinis
ENSORLG00015008005	sbds	100	87.550	ENSGACG00000012697	sbds	100	87.550	Gasterosteus_aculeatus
ENSORLG00015008005	sbds	86	82.629	ENSGAGG00000022402	SBDS	99	82.629	Gopherus_agassizii
ENSORLG00015008005	sbds	96	62.083	ENSGGOG00000040023	-	92	62.083	Gorilla_gorilla
ENSORLG00015008005	sbds	100	92.771	ENSHBUG00000002660	sbds	100	92.771	Haplochromis_burtoni
ENSORLG00015008005	sbds	100	79.518	ENSHGLG00000009671	SBDS	99	79.518	Heterocephalus_glaber_female
ENSORLG00015008005	sbds	100	79.518	ENSHGLG00100011332	SBDS	99	79.518	Heterocephalus_glaber_male
ENSORLG00015008005	sbds	100	86.345	ENSHCOG00000018606	sbds	100	86.345	Hippocampus_comes
ENSORLG00015008005	sbds	100	85.944	ENSIPUG00000006536	sbds	99	85.944	Ictalurus_punctatus
ENSORLG00015008005	sbds	99	78.543	ENSJJAG00000012033	-	99	78.543	Jaculus_jaculus
ENSORLG00015008005	sbds	99	58.400	ENSJJAG00000003934	-	99	58.400	Jaculus_jaculus
ENSORLG00015008005	sbds	100	91.566	ENSKMAG00000018542	sbds	100	91.566	Kryptolebias_marmoratus
ENSORLG00015008005	sbds	100	90.361	ENSLBEG00000016687	sbds	100	90.361	Labrus_bergylta
ENSORLG00015008005	sbds	100	70.817	ENSLACG00000018916	SBDS	99	70.817	Latimeria_chalumnae
ENSORLG00015008005	sbds	100	84.739	ENSLOCG00000004073	sbds	99	84.739	Lepisosteus_oculatus
ENSORLG00015008005	sbds	100	79.920	ENSLAFG00000008763	SBDS	99	79.920	Loxodonta_africana
ENSORLG00015008005	sbds	100	79.920	ENSMFAG00000032620	SBDS	99	79.920	Macaca_fascicularis
ENSORLG00015008005	sbds	100	79.920	ENSMMUG00000045653	SBDS	99	79.920	Macaca_mulatta
ENSORLG00015008005	sbds	100	79.920	ENSMNEG00000031523	SBDS	99	79.920	Macaca_nemestrina
ENSORLG00015008005	sbds	100	64.032	ENSMLEG00000036826	SBDS	99	62.451	Mandrillus_leucophaeus
ENSORLG00015008005	sbds	100	91.968	ENSMAMG00000016062	sbds	100	91.968	Mastacembelus_armatus
ENSORLG00015008005	sbds	100	92.771	ENSMZEG00005024385	sbds	100	92.771	Maylandia_zebra
ENSORLG00015008005	sbds	100	81.124	ENSMGAG00000002119	SBDS	99	81.124	Meleagris_gallopavo
ENSORLG00015008005	sbds	100	65.462	ENSMAUG00000022214	-	100	65.462	Mesocricetus_auratus
ENSORLG00015008005	sbds	100	80.321	ENSMICG00000014366	SBDS	99	80.321	Microcebus_murinus
ENSORLG00015008005	sbds	100	80.723	ENSMOCG00000011739	Sbds	99	80.723	Microtus_ochrogaster
ENSORLG00015008005	sbds	100	80.800	ENSMMOG00000005061	sbds	100	80.800	Mola_mola
ENSORLG00015008005	sbds	100	81.526	ENSMODG00000006644	SBDS	99	81.526	Monodelphis_domestica
ENSORLG00015008005	sbds	100	87.149	ENSMALG00000010219	sbds	100	87.149	Monopterus_albus
ENSORLG00015008005	sbds	100	81.526	MGP_CAROLIEiJ_G0027800	Sbds	98	90.476	Mus_caroli
ENSORLG00015008005	sbds	100	81.928	ENSMUSG00000025337	Sbds	98	90.476	Mus_musculus
ENSORLG00015008005	sbds	100	81.526	MGP_PahariEiJ_G0024384	Sbds	98	90.476	Mus_pahari
ENSORLG00015008005	sbds	100	81.928	MGP_SPRETEiJ_G0028798	Sbds	98	90.476	Mus_spretus
ENSORLG00015008005	sbds	67	80.240	ENSMPUG00000016192	SBDS	96	80.240	Mustela_putorius_furo
ENSORLG00015008005	sbds	73	75.691	ENSMLUG00000013575	SBDS	99	75.691	Myotis_lucifugus
ENSORLG00015008005	sbds	100	81.124	ENSNGAG00000012093	Sbds	99	81.124	Nannospalax_galili
ENSORLG00015008005	sbds	100	92.771	ENSNBRG00000017027	sbds	100	92.771	Neolamprologus_brichardi
ENSORLG00015008005	sbds	100	79.920	ENSNLEG00000013288	SBDS	99	79.920	Nomascus_leucogenys
ENSORLG00015008005	sbds	100	81.928	ENSOPRG00000008721	SBDS	99	81.928	Ochotona_princeps
ENSORLG00015008005	sbds	100	73.092	ENSODEG00000019253	-	84	73.092	Octodon_degus
ENSORLG00015008005	sbds	100	62.249	ENSODEG00000001116	-	99	62.249	Octodon_degus
ENSORLG00015008005	sbds	100	62.249	ENSODEG00000000137	-	84	65.060	Octodon_degus
ENSORLG00015008005	sbds	100	91.968	ENSONIG00000005874	sbds	100	91.968	Oreochromis_niloticus
ENSORLG00015008005	sbds	82	78.922	ENSOANG00000007674	-	99	78.922	Ornithorhynchus_anatinus
ENSORLG00015008005	sbds	100	81.928	ENSOCUG00000003170	SBDS	99	81.928	Oryctolagus_cuniculus
ENSORLG00015008005	sbds	100	99.197	ENSORLG00000023489	sbds	100	99.197	Oryzias_latipes
ENSORLG00015008005	sbds	100	100.000	ENSORLG00020019282	sbds	100	100.000	Oryzias_latipes_hni
ENSORLG00015008005	sbds	100	97.590	ENSOMEG00000022747	sbds	100	97.590	Oryzias_melastigma
ENSORLG00015008005	sbds	100	68.273	ENSOGAG00000015036	-	99	68.273	Otolemur_garnettii
ENSORLG00015008005	sbds	100	80.723	ENSOGAG00000009011	-	99	80.723	Otolemur_garnettii
ENSORLG00015008005	sbds	100	80.321	ENSOARG00000010609	SBDS	99	80.321	Ovis_aries
ENSORLG00015008005	sbds	100	79.116	ENSPPAG00000043889	-	99	79.116	Pan_paniscus
ENSORLG00015008005	sbds	100	79.920	ENSPPRG00000002307	SBDS	99	79.920	Panthera_pardus
ENSORLG00015008005	sbds	100	79.920	ENSPTIG00000021308	SBDS	99	79.920	Panthera_tigris_altaica
ENSORLG00015008005	sbds	100	79.920	ENSPTRG00000019254	SBDS	99	79.920	Pan_troglodytes
ENSORLG00015008005	sbds	100	66.667	ENSPTRG00000047744	-	99	66.667	Pan_troglodytes
ENSORLG00015008005	sbds	87	77.419	ENSPTRG00000048174	-	88	81.726	Pan_troglodytes
ENSORLG00015008005	sbds	100	66.667	ENSPTRG00000050835	-	99	66.667	Pan_troglodytes
ENSORLG00015008005	sbds	100	79.920	ENSPANG00000004078	SBDS	99	79.920	Papio_anubis
ENSORLG00015008005	sbds	100	87.149	ENSPKIG00000006489	sbds	99	87.149	Paramormyrops_kingsleyae
ENSORLG00015008005	sbds	83	82.126	ENSPSIG00000014603	SBDS	99	82.126	Pelodiscus_sinensis
ENSORLG00015008005	sbds	100	91.566	ENSPMGG00000004246	sbds	100	91.566	Periophthalmus_magnuspinnatus
ENSORLG00015008005	sbds	100	81.124	ENSPEMG00000008728	Sbds	99	81.124	Peromyscus_maniculatus_bairdii
ENSORLG00015008005	sbds	100	81.928	ENSPCIG00000029718	SBDS	99	81.928	Phascolarctos_cinereus
ENSORLG00015008005	sbds	100	90.763	ENSPFOG00000015837	sbds	100	90.763	Poecilia_formosa
ENSORLG00015008005	sbds	100	91.165	ENSPLAG00000003641	sbds	100	91.165	Poecilia_latipinna
ENSORLG00015008005	sbds	100	90.763	ENSPMEG00000019483	sbds	100	90.763	Poecilia_mexicana
ENSORLG00015008005	sbds	100	91.165	ENSPREG00000018758	sbds	100	91.165	Poecilia_reticulata
ENSORLG00015008005	sbds	100	79.920	ENSPPYG00000017513	SBDS	99	79.920	Pongo_abelii
ENSORLG00015008005	sbds	100	79.920	ENSPCOG00000021098	SBDS	99	79.920	Propithecus_coquereli
ENSORLG00015008005	sbds	100	80.321	ENSPVAG00000009369	SBDS	99	80.321	Pteropus_vampyrus
ENSORLG00015008005	sbds	100	92.369	ENSPNYG00000022403	sbds	100	92.369	Pundamilia_nyererei
ENSORLG00015008005	sbds	100	86.747	ENSPNAG00000001120	sbds	99	86.747	Pygocentrus_nattereri
ENSORLG00015008005	sbds	100	81.526	ENSRNOG00000000888	Sbds	99	81.526	Rattus_norvegicus
ENSORLG00015008005	sbds	100	79.920	ENSRBIG00000035557	SBDS	99	79.920	Rhinopithecus_bieti
ENSORLG00015008005	sbds	100	79.920	ENSRROG00000040842	-	99	79.920	Rhinopithecus_roxellana
ENSORLG00015008005	sbds	100	65.462	ENSRROG00000041986	-	99	65.462	Rhinopithecus_roxellana
ENSORLG00015008005	sbds	98	43.028	YLR022C	-	96	42.041	Saccharomyces_cerevisiae
ENSORLG00015008005	sbds	93	77.922	ENSSBOG00000022460	SBDS	99	77.922	Saimiri_boliviensis_boliviensis
ENSORLG00015008005	sbds	100	71.084	ENSSHAG00000010263	SBDS	99	71.084	Sarcophilus_harrisii
ENSORLG00015008005	sbds	100	88.755	ENSSFOG00015001108	sbds	99	88.755	Scleropages_formosus
ENSORLG00015008005	sbds	100	89.558	ENSSMAG00000020506	sbds	100	89.558	Scophthalmus_maximus
ENSORLG00015008005	sbds	100	91.165	ENSSDUG00000001528	sbds	100	91.165	Seriola_dumerili
ENSORLG00015008005	sbds	100	90.763	ENSSLDG00000003659	sbds	100	90.763	Seriola_lalandi_dorsalis
ENSORLG00015008005	sbds	73	86.047	ENSSARG00000001899	-	73	86.047	Sorex_araneus
ENSORLG00015008005	sbds	61	84.967	ENSSARG00000013132	-	100	84.967	Sorex_araneus
ENSORLG00015008005	sbds	100	81.124	ENSSPUG00000002699	SBDS	99	81.124	Sphenodon_punctatus
ENSORLG00015008005	sbds	100	91.566	ENSSPAG00000016419	sbds	100	84.400	Stegastes_partitus
ENSORLG00015008005	sbds	100	80.321	ENSSSCG00000007732	SBDS	99	80.321	Sus_scrofa
ENSORLG00015008005	sbds	66	84.146	ENSTGUG00000003426	SBDS	99	84.146	Taeniopygia_guttata
ENSORLG00015008005	sbds	100	90.361	ENSTRUG00000021443	sbds	100	90.361	Takifugu_rubripes
ENSORLG00015008005	sbds	100	90.361	ENSTNIG00000019000	sbds	100	90.361	Tetraodon_nigroviridis
ENSORLG00015008005	sbds	84	68.750	ENSTBEG00000001178	SBDS	94	70.051	Tupaia_belangeri
ENSORLG00015008005	sbds	100	62.651	ENSTTRG00000003921	SBDS	99	62.651	Tursiops_truncatus
ENSORLG00015008005	sbds	100	79.920	ENSUAMG00000001326	SBDS	99	79.920	Ursus_americanus
ENSORLG00015008005	sbds	100	79.920	ENSUMAG00000015353	SBDS	99	79.920	Ursus_maritimus
ENSORLG00015008005	sbds	100	79.920	ENSVVUG00000016478	SBDS	99	79.920	Vulpes_vulpes
ENSORLG00015008005	sbds	100	84.337	ENSXETG00000010093	sbds	99	84.337	Xenopus_tropicalis
ENSORLG00015008005	sbds	100	79.518	ENSXCOG00000010639	sbds	100	79.518	Xiphophorus_couchianus
ENSORLG00015008005	sbds	100	91.165	ENSXMAG00000006065	sbds	100	91.165	Xiphophorus_maculatus