EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015008062 (Gene tree)
Gene ID: -
Gene Symbol: srrt
Alias: -
Full Name: serrate RNA effector molecule homolog (Arabidopsis)
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 14334 bases
Position: chr14:15843889-15858222
Accession: ZDB-GENE-020419-13
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015026440	ARS2	PF04959.13	4.7e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015002862	-	6117	-	ENSORLP00015026440	870 (aa)	-	-

Gene Model

Click here to download ENSORLG00015008062's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015008062's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015008062	srrt	52	74.891	ENSG00000087087	SRRT	98	88.710	Homo_sapiens
ENSORLG00015008062	srrt	95	80.308	ENSAPOG00000002304	srrt	98	87.007	Acanthochromis_polyacanthus
ENSORLG00015008062	srrt	96	63.543	ENSAMEG00000014506	SRRT	96	65.178	Ailuropoda_melanoleuca
ENSORLG00015008062	srrt	85	91.176	ENSACIG00000015795	srrt	95	91.755	Amphilophus_citrinellus
ENSORLG00015008062	srrt	84	92.341	ENSAOCG00000009693	srrt	93	92.600	Amphiprion_ocellaris
ENSORLG00015008062	srrt	52	64.530	ENSAOCG00000009189	-	96	57.077	Amphiprion_ocellaris
ENSORLG00015008062	srrt	52	64.530	ENSAPEG00000020016	-	96	57.077	Amphiprion_percula
ENSORLG00015008062	srrt	83	92.123	ENSAPEG00000003646	srrt	97	92.178	Amphiprion_percula
ENSORLG00015008062	srrt	53	62.449	ENSATEG00000003652	-	89	63.934	Anabas_testudineus
ENSORLG00015008062	srrt	95	84.349	ENSATEG00000014425	srrt	98	85.664	Anabas_testudineus
ENSORLG00015008062	srrt	52	74.784	ENSACAG00000001014	SRRT	98	64.828	Anolis_carolinensis
ENSORLG00015008062	srrt	52	73.763	ENSANAG00000031718	SRRT	96	65.092	Aotus_nancymaae
ENSORLG00015008062	srrt	53	65.190	ENSACLG00000009423	-	96	55.936	Astatotilapia_calliptera
ENSORLG00015008062	srrt	95	84.468	ENSACLG00000013156	srrt	94	87.063	Astatotilapia_calliptera
ENSORLG00015008062	srrt	51	79.911	ENSAMXG00000016671	srrt	95	72.005	Astyanax_mexicanus
ENSORLG00015008062	srrt	52	73.333	ENSBTAG00000001134	SRRT	96	64.787	Bos_taurus
ENSORLG00015008062	srrt	61	46.296	WBGene00017085	E01A2.2	85	43.340	Caenorhabditis_elegans
ENSORLG00015008062	srrt	52	73.763	ENSCJAG00000014917	SRRT	96	65.741	Callithrix_jacchus
ENSORLG00015008062	srrt	96	63.437	ENSCAFG00000023538	SRRT	96	64.531	Canis_familiaris
ENSORLG00015008062	srrt	98	63.375	ENSCAFG00020013358	SRRT	99	62.722	Canis_lupus_dingo
ENSORLG00015008062	srrt	52	73.810	ENSCHIG00000010495	SRRT	96	65.132	Capra_hircus
ENSORLG00015008062	srrt	52	74.026	ENSTSYG00000036426	SRRT	99	63.795	Carlito_syrichta
ENSORLG00015008062	srrt	95	64.497	ENSCAPG00000013586	SRRT	100	65.845	Cavia_aperea
ENSORLG00015008062	srrt	96	63.605	ENSCPOG00000001739	SRRT	96	65.513	Cavia_porcellus
ENSORLG00015008062	srrt	52	73.763	ENSCCAG00000015877	SRRT	96	65.665	Cebus_capucinus
ENSORLG00015008062	srrt	52	74.026	ENSCATG00000036306	SRRT	97	64.868	Cercocebus_atys
ENSORLG00015008062	srrt	96	62.341	ENSCLAG00000007568	SRRT	95	67.606	Chinchilla_lanigera
ENSORLG00015008062	srrt	52	73.763	ENSCSAG00000017996	SRRT	96	65.589	Chlorocebus_sabaeus
ENSORLG00015008062	srrt	51	74.815	ENSCHOG00000007815	SRRT	64	74.265	Choloepus_hoffmanni
ENSORLG00015008062	srrt	69	74.123	ENSCPBG00000011553	SRRT	81	72.000	Chrysemys_picta_bellii
ENSORLG00015008062	srrt	100	42.437	ENSCING00000003506	-	86	44.689	Ciona_intestinalis
ENSORLG00015008062	srrt	100	42.444	ENSCSAVG00000008394	-	81	55.714	Ciona_savignyi
ENSORLG00015008062	srrt	52	74.026	ENSCANG00000034556	SRRT	96	65.701	Colobus_angolensis_palliatus
ENSORLG00015008062	srrt	96	63.415	ENSCGRG00001001594	Srrt	96	65.127	Cricetulus_griseus_chok1gshd
ENSORLG00015008062	srrt	96	58.980	ENSCGRG00000007292	Srrt	95	67.335	Cricetulus_griseus_crigri
ENSORLG00015008062	srrt	98	72.696	ENSCSEG00000017878	srrt	98	75.576	Cynoglossus_semilaevis
ENSORLG00015008062	srrt	52	64.119	ENSCSEG00000005233	-	96	53.721	Cynoglossus_semilaevis
ENSORLG00015008062	srrt	95	84.368	ENSCVAG00000019848	srrt	98	85.099	Cyprinodon_variegatus
ENSORLG00015008062	srrt	96	74.765	ENSDARG00000017762	srrt	98	74.201	Danio_rerio
ENSORLG00015008062	srrt	52	73.763	ENSDNOG00000003851	SRRT	96	65.012	Dasypus_novemcinctus
ENSORLG00015008062	srrt	96	63.889	ENSDORG00000005584	Srrt	95	68.560	Dipodomys_ordii
ENSORLG00015008062	srrt	89	53.132	FBgn0033062	Ars2	79	53.648	Drosophila_melanogaster
ENSORLG00015008062	srrt	74	71.429	ENSETEG00000016175	SRRT	82	73.548	Echinops_telfairi
ENSORLG00015008062	srrt	62	62.690	ENSEBUG00000008517	-	76	62.690	Eptatretus_burgeri
ENSORLG00015008062	srrt	52	73.763	ENSEASG00005016956	SRRT	96	64.719	Equus_asinus_asinus
ENSORLG00015008062	srrt	52	73.763	ENSECAG00000012292	SRRT	96	64.538	Equus_caballus
ENSORLG00015008062	srrt	80	77.083	ENSEEUG00000009117	SRRT	81	71.875	Erinaceus_europaeus
ENSORLG00015008062	srrt	96	73.648	ENSELUG00000006651	srrt	96	71.982	Esox_lucius
ENSORLG00015008062	srrt	93	59.338	ENSELUG00000021216	-	96	59.931	Esox_lucius
ENSORLG00015008062	srrt	96	64.046	ENSFCAG00000006855	SRRT	96	65.132	Felis_catus
ENSORLG00015008062	srrt	52	70.354	ENSFDAG00000021347	SRRT	95	65.353	Fukomys_damarensis
ENSORLG00015008062	srrt	76	88.492	ENSFHEG00000002756	srrt	93	89.011	Fundulus_heteroclitus
ENSORLG00015008062	srrt	53	58.351	ENSFHEG00000004105	-	97	57.841	Fundulus_heteroclitus
ENSORLG00015008062	srrt	73	66.290	ENSGMOG00000018694	-	94	52.111	Gadus_morhua
ENSORLG00015008062	srrt	96	74.313	ENSGMOG00000018619	srrt	98	74.156	Gadus_morhua
ENSORLG00015008062	srrt	95	83.871	ENSGAFG00000005423	srrt	98	84.615	Gambusia_affinis
ENSORLG00015008062	srrt	52	63.774	ENSGAFG00000020383	-	96	55.282	Gambusia_affinis
ENSORLG00015008062	srrt	96	82.151	ENSGACG00000020387	srrt	98	81.755	Gasterosteus_aculeatus
ENSORLG00015008062	srrt	93	52.736	ENSGACG00000001100	-	96	55.336	Gasterosteus_aculeatus
ENSORLG00015008062	srrt	52	74.026	ENSGGOG00000001508	SRRT	96	65.658	Gorilla_gorilla
ENSORLG00015008062	srrt	52	91.429	ENSHBUG00000002942	srrt	94	86.597	Haplochromis_burtoni
ENSORLG00015008062	srrt	96	63.963	ENSHGLG00000008344	Srrt	94	68.098	Heterocephalus_glaber_female
ENSORLG00015008062	srrt	96	65.076	ENSHGLG00100018857	Srrt	94	68.802	Heterocephalus_glaber_male
ENSORLG00015008062	srrt	93	54.367	ENSHCOG00000008904	-	95	54.513	Hippocampus_comes
ENSORLG00015008062	srrt	98	80.980	ENSHCOG00000005403	srrt	98	80.630	Hippocampus_comes
ENSORLG00015008062	srrt	93	71.342	ENSIPUG00000021150	srrt	98	71.527	Ictalurus_punctatus
ENSORLG00015008062	srrt	96	64.111	ENSSTOG00000013776	SRRT	96	65.893	Ictidomys_tridecemlineatus
ENSORLG00015008062	srrt	96	64.520	ENSJJAG00000010446	Srrt	95	68.089	Jaculus_jaculus
ENSORLG00015008062	srrt	52	64.718	ENSKMAG00000008468	-	96	55.466	Kryptolebias_marmoratus
ENSORLG00015008062	srrt	53	89.530	ENSKMAG00000013599	srrt	98	83.778	Kryptolebias_marmoratus
ENSORLG00015008062	srrt	98	78.637	ENSLBEG00000016308	srrt	98	78.588	Labrus_bergylta
ENSORLG00015008062	srrt	53	54.989	ENSLACG00000001089	SRRT	98	57.176	Latimeria_chalumnae
ENSORLG00015008062	srrt	57	82.278	ENSLOCG00000013658	srrt	100	58.222	Lepisosteus_oculatus
ENSORLG00015008062	srrt	52	73.763	ENSLAFG00000007725	SRRT	96	64.965	Loxodonta_africana
ENSORLG00015008062	srrt	52	74.026	ENSMFAG00000033745	SRRT	99	64.828	Macaca_fascicularis
ENSORLG00015008062	srrt	96	62.984	ENSMMUG00000021255	SRRT	96	65.589	Macaca_mulatta
ENSORLG00015008062	srrt	52	73.763	ENSMNEG00000041864	SRRT	97	64.828	Macaca_nemestrina
ENSORLG00015008062	srrt	52	74.026	ENSMLEG00000029479	SRRT	98	64.828	Mandrillus_leucophaeus
ENSORLG00015008062	srrt	52	89.474	ENSMAMG00000014311	srrt	98	85.781	Mastacembelus_armatus
ENSORLG00015008062	srrt	52	66.309	ENSMAMG00000010681	-	96	56.977	Mastacembelus_armatus
ENSORLG00015008062	srrt	53	65.401	ENSMZEG00005028002	-	96	55.936	Maylandia_zebra
ENSORLG00015008062	srrt	52	91.648	ENSMZEG00005016135	srrt	94	86.946	Maylandia_zebra
ENSORLG00015008062	srrt	52	73.548	ENSMAUG00000011386	Srrt	95	68.000	Mesocricetus_auratus
ENSORLG00015008062	srrt	52	73.763	ENSMICG00000009471	SRRT	98	64.538	Microcebus_murinus
ENSORLG00015008062	srrt	52	73.763	ENSMOCG00000001971	Srrt	95	68.485	Microtus_ochrogaster
ENSORLG00015008062	srrt	83	54.509	ENSMMOG00000011137	-	88	55.086	Mola_mola
ENSORLG00015008062	srrt	95	79.880	ENSMMOG00000016399	srrt	98	80.140	Mola_mola
ENSORLG00015008062	srrt	52	69.872	ENSMODG00000004862	SRRT	95	67.530	Monodelphis_domestica
ENSORLG00015008062	srrt	54	52.340	ENSMALG00000005567	-	88	53.404	Monopterus_albus
ENSORLG00015008062	srrt	90	79.119	ENSMALG00000018604	srrt	99	77.738	Monopterus_albus
ENSORLG00015008062	srrt	96	65.340	MGP_CAROLIEiJ_G0027870	Srrt	99	71.642	Mus_caroli
ENSORLG00015008062	srrt	96	65.340	ENSMUSG00000037364	Srrt	99	71.642	Mus_musculus
ENSORLG00015008062	srrt	96	65.340	MGP_PahariEiJ_G0024456	Srrt	99	71.642	Mus_pahari
ENSORLG00015008062	srrt	96	65.340	MGP_SPRETEiJ_G0028875	Srrt	99	71.642	Mus_spretus
ENSORLG00015008062	srrt	96	64.352	ENSMPUG00000015839	SRRT	96	65.362	Mustela_putorius_furo
ENSORLG00015008062	srrt	52	73.548	ENSMLUG00000009975	SRRT	96	64.983	Myotis_lucifugus
ENSORLG00015008062	srrt	96	64.774	ENSNGAG00000023715	Srrt	100	64.761	Nannospalax_galili
ENSORLG00015008062	srrt	52	90.529	ENSNBRG00000019100	srrt	98	84.284	Neolamprologus_brichardi
ENSORLG00015008062	srrt	95	57.459	ENSNLEG00000011987	SRRT	99	59.112	Nomascus_leucogenys
ENSORLG00015008062	srrt	96	54.289	ENSMEUG00000011941	SRRT	96	53.765	Notamacropus_eugenii
ENSORLG00015008062	srrt	61	75.000	ENSOPRG00000002502	-	67	79.545	Ochotona_princeps
ENSORLG00015008062	srrt	96	64.637	ENSODEG00000016856	SRRT	95	68.293	Octodon_degus
ENSORLG00015008062	srrt	52	66.809	ENSONIG00000016080	-	94	56.842	Oreochromis_niloticus
ENSORLG00015008062	srrt	52	91.429	ENSONIG00000004242	srrt	98	83.655	Oreochromis_niloticus
ENSORLG00015008062	srrt	100	99.655	ENSORLG00000008120	srrt	100	99.655	Oryzias_latipes
ENSORLG00015008062	srrt	100	99.425	ENSORLG00020003058	srrt	100	99.425	Oryzias_latipes_hni
ENSORLG00015008062	srrt	93	57.160	ENSOMEG00000006963	-	96	58.019	Oryzias_melastigma
ENSORLG00015008062	srrt	100	96.216	ENSOMEG00000003155	srrt	100	96.216	Oryzias_melastigma
ENSORLG00015008062	srrt	52	73.763	ENSOGAG00000017242	SRRT	96	65.593	Otolemur_garnettii
ENSORLG00015008062	srrt	52	73.593	ENSOARG00000015645	SRRT	96	65.127	Ovis_aries
ENSORLG00015008062	srrt	52	74.026	ENSPPAG00000041090	SRRT	96	65.585	Pan_paniscus
ENSORLG00015008062	srrt	96	64.028	ENSPPRG00000009557	SRRT	96	65.122	Panthera_pardus
ENSORLG00015008062	srrt	96	64.162	ENSPTIG00000014355	SRRT	96	65.247	Panthera_tigris_altaica
ENSORLG00015008062	srrt	52	74.026	ENSPTRG00000019511	SRRT	99	62.937	Pan_troglodytes
ENSORLG00015008062	srrt	52	72.304	ENSPANG00000020763	SRRT	97	64.828	Papio_anubis
ENSORLG00015008062	srrt	98	69.676	ENSPKIG00000005434	srrt	98	71.705	Paramormyrops_kingsleyae
ENSORLG00015008062	srrt	94	68.193	ENSPKIG00000022212	-	98	68.208	Paramormyrops_kingsleyae
ENSORLG00015008062	srrt	52	74.286	ENSPSIG00000016311	SRRT	98	64.726	Pelodiscus_sinensis
ENSORLG00015008062	srrt	52	75.165	ENSPEMG00000010834	Srrt	95	68.293	Peromyscus_maniculatus_bairdii
ENSORLG00015008062	srrt	96	54.661	ENSPMAG00000009614	-	95	53.988	Petromyzon_marinus
ENSORLG00015008062	srrt	96	63.711	ENSPCIG00000000816	SRRT	96	65.970	Phascolarctos_cinereus
ENSORLG00015008062	srrt	95	84.248	ENSPFOG00000005704	srrt	98	84.983	Poecilia_formosa
ENSORLG00015008062	srrt	95	82.645	ENSPLAG00000021992	srrt	98	83.410	Poecilia_latipinna
ENSORLG00015008062	srrt	95	84.010	ENSPMEG00000001182	srrt	98	84.400	Poecilia_mexicana
ENSORLG00015008062	srrt	95	84.129	ENSPREG00000022308	srrt	98	84.633	Poecilia_reticulata
ENSORLG00015008062	srrt	52	55.844	ENSPPYG00000017432	SRRT	95	56.098	Pongo_abelii
ENSORLG00015008062	srrt	52	71.670	ENSPCAG00000001621	SRRT	96	62.144	Procavia_capensis
ENSORLG00015008062	srrt	52	74.026	ENSPCOG00000025751	SRRT	96	65.478	Propithecus_coquereli
ENSORLG00015008062	srrt	66	65.806	ENSPVAG00000000834	SRRT	100	57.305	Pteropus_vampyrus
ENSORLG00015008062	srrt	52	91.648	ENSPNYG00000018710	srrt	98	86.713	Pundamilia_nyererei
ENSORLG00015008062	srrt	72	86.076	ENSPNAG00000010629	srrt	97	58.883	Pygocentrus_nattereri
ENSORLG00015008062	srrt	52	64.629	ENSRNOG00000048277	AABR07035787.1	97	63.125	Rattus_norvegicus
ENSORLG00015008062	srrt	52	73.763	ENSRBIG00000035718	SRRT	97	64.828	Rhinopithecus_bieti
ENSORLG00015008062	srrt	52	73.763	ENSRROG00000030622	SRRT	98	64.828	Rhinopithecus_roxellana
ENSORLG00015008062	srrt	52	74.026	ENSSBOG00000033570	SRRT	96	65.694	Saimiri_boliviensis_boliviensis
ENSORLG00015008062	srrt	72	60.217	ENSSHAG00000007349	-	99	63.538	Sarcophilus_harrisii
ENSORLG00015008062	srrt	94	72.608	ENSSFOG00015017293	srrt	98	74.543	Scleropages_formosus
ENSORLG00015008062	srrt	95	83.593	ENSSMAG00000015342	srrt	98	85.315	Scophthalmus_maximus
ENSORLG00015008062	srrt	52	62.500	ENSSMAG00000018195	-	95	54.779	Scophthalmus_maximus
ENSORLG00015008062	srrt	95	87.336	ENSSDUG00000012049	srrt	98	84.848	Seriola_dumerili
ENSORLG00015008062	srrt	52	55.650	ENSSDUG00000002051	-	98	55.441	Seriola_dumerili
ENSORLG00015008062	srrt	83	90.570	ENSSLDG00000017477	srrt	91	90.234	Seriola_lalandi_dorsalis
ENSORLG00015008062	srrt	95	85.629	ENSSPAG00000005665	srrt	96	86.095	Stegastes_partitus
ENSORLG00015008062	srrt	52	57.609	ENSSPAG00000018943	-	98	56.790	Stegastes_partitus
ENSORLG00015008062	srrt	98	80.370	ENSTRUG00000016075	srrt	98	79.884	Takifugu_rubripes
ENSORLG00015008062	srrt	90	53.625	ENSTRUG00000000023	-	93	55.072	Takifugu_rubripes
ENSORLG00015008062	srrt	93	52.593	ENSTNIG00000003111	-	95	54.355	Tetraodon_nigroviridis
ENSORLG00015008062	srrt	74	74.551	ENSTNIG00000011779	srrt	100	75.599	Tetraodon_nigroviridis
ENSORLG00015008062	srrt	59	76.596	ENSTBEG00000005212	SRRT	60	76.596	Tupaia_belangeri
ENSORLG00015008062	srrt	52	73.763	ENSTTRG00000011104	SRRT	96	65.362	Tursiops_truncatus
ENSORLG00015008062	srrt	96	64.005	ENSUAMG00000027997	SRRT	98	65.469	Ursus_americanus
ENSORLG00015008062	srrt	96	64.014	ENSUMAG00000011295	SRRT	96	65.473	Ursus_maritimus
ENSORLG00015008062	srrt	96	63.437	ENSVVUG00000023572	SRRT	96	64.531	Vulpes_vulpes
ENSORLG00015008062	srrt	72	75.281	ENSXETG00000025124	srrt	81	76.966	Xenopus_tropicalis
ENSORLG00015008062	srrt	53	53.404	ENSXCOG00000013105	-	94	54.043	Xiphophorus_couchianus
ENSORLG00015008062	srrt	98	84.266	ENSXMAG00000007627	srrt	98	84.732	Xiphophorus_maculatus
ENSORLG00015008062	srrt	52	63.913	ENSXMAG00000002090	-	96	55.674	Xiphophorus_maculatus