EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015008410 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-37o8.1
Alias: -
Full Name: si:dkey-37o8.1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 3068 bases
Position: chr20:22177100-22180167
Accession: ZDB-GENE-030131-5667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015007565	GTP_EFTU	PF00009.27	8.7e-53	1	1
ENSORLP00015007583	GTP_EFTU	PF00009.27	1e-52	1	1
ENSORLP00015007565	MMR_HSR1	PF01926.23	4.5e-07	1	1
ENSORLP00015007583	MMR_HSR1	PF01926.23	5.6e-07	1	1
ENSORLP00015007565	GTP_EFTU_D2	PF03144.25	1.2e-12	1	1
ENSORLP00015007583	GTP_EFTU_D2	PF03144.25	1.4e-12	1	1
ENSORLP00015007565	GTP_EFTU_D3	PF03143.17	1.6e-37	1	1
ENSORLP00015007583	GTP_EFTU_D3	PF03143.17	1.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015002312	-	2619	-	ENSORLP00015007565	456 (aa)	-	-
ENSORLT00015002281	-	2715	-	ENSORLP00015007583	488 (aa)	-	-

Gene Model

Click here to download ENSORLG00015008410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015008410's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015008410	si:dkey-37o8.1	96	38.322	ENSORLG00015005515	-	84	36.996
ENSORLG00015008410	si:dkey-37o8.1	96	30.134	ENSORLG00015003107	tufm	87	30.134
ENSORLG00015008410	si:dkey-37o8.1	100	64.912	ENSORLG00015004929	-	74	82.407
ENSORLG00015008410	si:dkey-37o8.1	97	71.332	ENSORLG00015002397	-	96	71.332
ENSORLG00015008410	si:dkey-37o8.1	96	37.753	ENSORLG00015023105	hbs1l	61	37.753
ENSORLG00015008410	si:dkey-37o8.1	97	39.013	ENSORLG00015008971	gspt1l	82	39.013

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015008410	si:dkey-37o8.1	100	89.254	ENSAPOG00000016459	si:dkey-37o8.1	100	89.254	Acanthochromis_polyacanthus
ENSORLG00015008410	si:dkey-37o8.1	96	89.245	ENSACIG00000020985	si:dkey-37o8.1	82	89.245	Amphilophus_citrinellus
ENSORLG00015008410	si:dkey-37o8.1	100	91.028	ENSAOCG00000002663	si:dkey-37o8.1	100	91.028	Amphiprion_ocellaris
ENSORLG00015008410	si:dkey-37o8.1	100	91.028	ENSAPEG00000012670	si:dkey-37o8.1	100	91.028	Amphiprion_percula
ENSORLG00015008410	si:dkey-37o8.1	93	91.469	ENSATEG00000002217	si:dkey-37o8.1	99	91.469	Anabas_testudineus
ENSORLG00015008410	si:dkey-37o8.1	100	90.570	ENSACLG00000003519	si:dkey-37o8.1	100	90.570	Astatotilapia_calliptera
ENSORLG00015008410	si:dkey-37o8.1	100	85.153	ENSAMXG00000002728	si:dkey-37o8.1	100	85.153	Astyanax_mexicanus
ENSORLG00015008410	si:dkey-37o8.1	98	73.378	ENSCPBG00000020570	-	87	74.487	Chrysemys_picta_bellii
ENSORLG00015008410	si:dkey-37o8.1	100	84.532	ENSCSEG00000019807	si:dkey-37o8.1	100	83.836	Cynoglossus_semilaevis
ENSORLG00015008410	si:dkey-37o8.1	99	89.868	ENSCVAG00000009828	si:dkey-37o8.1	99	89.868	Cyprinodon_variegatus
ENSORLG00015008410	si:dkey-37o8.1	100	81.878	ENSDARG00000071727	si:dkey-37o8.1	95	81.878	Danio_rerio
ENSORLG00015008410	si:dkey-37o8.1	100	84.498	ENSELUG00000007495	si:dkey-37o8.1	100	84.498	Esox_lucius
ENSORLG00015008410	si:dkey-37o8.1	99	89.579	ENSFHEG00000017452	si:dkey-37o8.1	99	89.579	Fundulus_heteroclitus
ENSORLG00015008410	si:dkey-37o8.1	99	80.396	ENSGMOG00000006122	si:dkey-37o8.1	100	80.396	Gadus_morhua
ENSORLG00015008410	si:dkey-37o8.1	98	83.929	ENSGAFG00000000367	si:dkey-37o8.1	99	83.929	Gambusia_affinis
ENSORLG00015008410	si:dkey-37o8.1	100	87.309	ENSGACG00000004505	si:dkey-37o8.1	100	87.309	Gasterosteus_aculeatus
ENSORLG00015008410	si:dkey-37o8.1	96	75.171	ENSGAGG00000007724	-	93	78.846	Gopherus_agassizii
ENSORLG00015008410	si:dkey-37o8.1	100	90.351	ENSHBUG00000015515	si:dkey-37o8.1	100	90.351	Haplochromis_burtoni
ENSORLG00015008410	si:dkey-37o8.1	99	80.488	ENSHCOG00000001215	si:dkey-37o8.1	100	80.488	Hippocampus_comes
ENSORLG00015008410	si:dkey-37o8.1	100	83.406	ENSIPUG00000004067	si:dkey-37o8.1	100	83.406	Ictalurus_punctatus
ENSORLG00015008410	si:dkey-37o8.1	100	88.621	ENSKMAG00000015910	si:dkey-37o8.1	100	88.621	Kryptolebias_marmoratus
ENSORLG00015008410	si:dkey-37o8.1	100	90.351	ENSLBEG00000021334	si:dkey-37o8.1	90	90.351	Labrus_bergylta
ENSORLG00015008410	si:dkey-37o8.1	99	75.166	ENSLACG00000003948	si:dkey-37o8.1	98	75.166	Latimeria_chalumnae
ENSORLG00015008410	si:dkey-37o8.1	99	79.912	ENSLOCG00000011245	si:dkey-37o8.1	99	79.912	Lepisosteus_oculatus
ENSORLG00015008410	si:dkey-37o8.1	99	74.058	ENSMAMG00000009907	si:dkey-37o8.1	94	74.058	Mastacembelus_armatus
ENSORLG00015008410	si:dkey-37o8.1	100	90.570	ENSMZEG00005018358	si:dkey-37o8.1	100	90.570	Maylandia_zebra
ENSORLG00015008410	si:dkey-37o8.1	99	90.000	ENSMMOG00000004111	si:dkey-37o8.1	98	90.000	Mola_mola
ENSORLG00015008410	si:dkey-37o8.1	96	80.137	ENSMALG00000017152	si:dkey-37o8.1	99	80.137	Monopterus_albus
ENSORLG00015008410	si:dkey-37o8.1	100	90.132	ENSNBRG00000013552	si:dkey-37o8.1	100	90.132	Neolamprologus_brichardi
ENSORLG00015008410	si:dkey-37o8.1	100	89.912	ENSONIG00000006165	si:dkey-37o8.1	100	89.912	Oreochromis_niloticus
ENSORLG00015008410	si:dkey-37o8.1	100	99.342	ENSORLG00000019066	si:dkey-37o8.1	100	99.342	Oryzias_latipes
ENSORLG00015008410	si:dkey-37o8.1	100	99.342	ENSORLG00020008094	si:dkey-37o8.1	100	99.342	Oryzias_latipes_hni
ENSORLG00015008410	si:dkey-37o8.1	100	96.491	ENSOMEG00000001868	si:dkey-37o8.1	100	96.491	Oryzias_melastigma
ENSORLG00015008410	si:dkey-37o8.1	100	82.353	ENSPKIG00000017246	si:dkey-37o8.1	100	82.353	Paramormyrops_kingsleyae
ENSORLG00015008410	si:dkey-37o8.1	58	67.897	ENSPSIG00000008080	-	95	67.897	Pelodiscus_sinensis
ENSORLG00015008410	si:dkey-37o8.1	100	90.591	ENSPFOG00000013173	si:dkey-37o8.1	100	90.591	Poecilia_formosa
ENSORLG00015008410	si:dkey-37o8.1	100	89.059	ENSPLAG00000010405	si:dkey-37o8.1	100	89.059	Poecilia_latipinna
ENSORLG00015008410	si:dkey-37o8.1	100	90.372	ENSPMEG00000015233	si:dkey-37o8.1	100	90.372	Poecilia_mexicana
ENSORLG00015008410	si:dkey-37o8.1	99	90.088	ENSPREG00000006280	si:dkey-37o8.1	100	90.088	Poecilia_reticulata
ENSORLG00015008410	si:dkey-37o8.1	100	90.351	ENSPNYG00000002059	si:dkey-37o8.1	100	90.351	Pundamilia_nyererei
ENSORLG00015008410	si:dkey-37o8.1	100	84.716	ENSPNAG00000009990	si:dkey-37o8.1	100	84.716	Pygocentrus_nattereri
ENSORLG00015008410	si:dkey-37o8.1	98	82.000	ENSSFOG00015019070	si:dkey-37o8.1	99	82.000	Scleropages_formosus
ENSORLG00015008410	si:dkey-37o8.1	100	90.570	ENSSMAG00000016143	si:dkey-37o8.1	100	90.570	Scophthalmus_maximus
ENSORLG00015008410	si:dkey-37o8.1	100	91.247	ENSSDUG00000009163	si:dkey-37o8.1	100	91.247	Seriola_dumerili
ENSORLG00015008410	si:dkey-37o8.1	100	91.028	ENSSLDG00000023761	si:dkey-37o8.1	100	91.028	Seriola_lalandi_dorsalis
ENSORLG00015008410	si:dkey-37o8.1	99	71.903	ENSSPUG00000007467	-	98	71.903	Sphenodon_punctatus
ENSORLG00015008410	si:dkey-37o8.1	100	90.591	ENSSPAG00000013856	si:dkey-37o8.1	100	90.591	Stegastes_partitus
ENSORLG00015008410	si:dkey-37o8.1	99	89.625	ENSTRUG00000009006	si:dkey-37o8.1	100	89.625	Takifugu_rubripes
ENSORLG00015008410	si:dkey-37o8.1	99	89.231	ENSTNIG00000017138	si:dkey-37o8.1	98	89.231	Tetraodon_nigroviridis
ENSORLG00015008410	si:dkey-37o8.1	96	75.626	ENSXETG00000017744	42Sp50	97	74.554	Xenopus_tropicalis
ENSORLG00015008410	si:dkey-37o8.1	99	90.308	ENSXCOG00000012296	si:dkey-37o8.1	100	90.308	Xiphophorus_couchianus
ENSORLG00015008410	si:dkey-37o8.1	100	90.810	ENSXMAG00000001998	si:dkey-37o8.1	100	90.810	Xiphophorus_maculatus