EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015008543 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162396
Alias: -
Full Name: zgc:162396
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 4207 bases
Position: chr21:27743323-27747529
Accession: ZDB-GENE-030131-1190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015026773	Methyltransf_31	PF13847.6	6.5e-14	1	1
ENSORLP00015026779	Methyltransf_31	PF13847.6	6.5e-14	1	1
ENSORLP00015026773	Methyltransf_8	PF05148.15	7.6e-05	1	1
ENSORLP00015026779	Methyltransf_8	PF05148.15	7.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015002005	-	2116	-	ENSORLP00015026779	272 (aa)	-	-
ENSORLT00015002022	-	2042	-	ENSORLP00015026773	272 (aa)	-	-

Gene Model

Click here to download ENSORLG00015008543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015008543's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015008543	zgc:162396	99	44.322	ENSORLG00015008510	zgc:162780	99	44.322
ENSORLG00015008543	zgc:162396	99	39.338	ENSORLG00015021473	si:ch211-93g23.2	100	39.338

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015008543	zgc:162396	99	67.159	ENSAPOG00000015421	zgc:162396	99	67.159	Acanthochromis_polyacanthus
ENSORLG00015008543	zgc:162396	99	69.373	ENSACIG00000015427	zgc:162396	99	69.373	Amphilophus_citrinellus
ENSORLG00015008543	zgc:162396	99	68.266	ENSAOCG00000004131	zgc:162396	99	68.266	Amphiprion_ocellaris
ENSORLG00015008543	zgc:162396	99	68.635	ENSAPEG00000008189	zgc:162396	99	68.635	Amphiprion_percula
ENSORLG00015008543	zgc:162396	99	65.683	ENSATEG00000011813	zgc:162396	98	65.683	Anabas_testudineus
ENSORLG00015008543	zgc:162396	98	43.820	ENSAPLG00000012593	-	99	43.820	Anas_platyrhynchos
ENSORLG00015008543	zgc:162396	99	70.849	ENSACLG00000006906	zgc:162396	99	70.849	Astatotilapia_calliptera
ENSORLG00015008543	zgc:162396	86	54.701	ENSAMXG00000037578	zgc:162396	92	54.701	Astyanax_mexicanus
ENSORLG00015008543	zgc:162396	99	62.731	ENSAMXG00000030552	zgc:162396	99	62.731	Astyanax_mexicanus
ENSORLG00015008543	zgc:162396	99	46.667	ENSCPBG00000002804	-	99	46.667	Chrysemys_picta_bellii
ENSORLG00015008543	zgc:162396	99	35.897	ENSCING00000012960	-	99	35.897	Ciona_intestinalis
ENSORLG00015008543	zgc:162396	100	73.529	ENSCVAG00000021429	zgc:162396	100	73.529	Cyprinodon_variegatus
ENSORLG00015008543	zgc:162396	99	58.303	ENSDARG00000069549	zgc:162396	98	66.667	Danio_rerio
ENSORLG00015008543	zgc:162396	99	60.517	ENSELUG00000005372	zgc:162396	99	60.517	Esox_lucius
ENSORLG00015008543	zgc:162396	99	46.296	ENSFALG00000012826	-	99	46.296	Ficedula_albicollis
ENSORLG00015008543	zgc:162396	100	71.691	ENSFHEG00000005224	-	100	71.691	Fundulus_heteroclitus
ENSORLG00015008543	zgc:162396	99	43.704	ENSGALG00000047535	-	99	43.704	Gallus_gallus
ENSORLG00015008543	zgc:162396	99	43.704	ENSGALG00000050548	-	99	43.704	Gallus_gallus
ENSORLG00015008543	zgc:162396	99	43.704	ENSGALG00000042073	-	99	43.704	Gallus_gallus
ENSORLG00015008543	zgc:162396	99	71.218	ENSGAFG00000018387	-	99	71.218	Gambusia_affinis
ENSORLG00015008543	zgc:162396	99	65.683	ENSGACG00000002200	zgc:162396	96	65.683	Gasterosteus_aculeatus
ENSORLG00015008543	zgc:162396	53	48.252	ENSGAGG00000004677	-	86	48.252	Gopherus_agassizii
ENSORLG00015008543	zgc:162396	99	70.480	ENSHBUG00000017584	zgc:162396	99	70.480	Haplochromis_burtoni
ENSORLG00015008543	zgc:162396	99	61.993	ENSIPUG00000001171	-	99	61.993	Ictalurus_punctatus
ENSORLG00015008543	zgc:162396	99	60.886	ENSIPUG00000001213	-	99	60.886	Ictalurus_punctatus
ENSORLG00015008543	zgc:162396	99	60.886	ENSIPUG00000001159	zgc:162396	99	60.886	Ictalurus_punctatus
ENSORLG00015008543	zgc:162396	100	69.485	ENSKMAG00000018426	-	100	69.485	Kryptolebias_marmoratus
ENSORLG00015008543	zgc:162396	99	68.266	ENSLBEG00000026502	zgc:162396	99	68.266	Labrus_bergylta
ENSORLG00015008543	zgc:162396	99	47.826	ENSLACG00000009261	-	99	47.826	Latimeria_chalumnae
ENSORLG00015008543	zgc:162396	99	67.528	ENSMAMG00000013213	zgc:162396	99	67.528	Mastacembelus_armatus
ENSORLG00015008543	zgc:162396	99	70.849	ENSMZEG00005000798	zgc:162396	99	70.849	Maylandia_zebra
ENSORLG00015008543	zgc:162396	99	43.223	ENSMGAG00000003269	-	99	43.223	Meleagris_gallopavo
ENSORLG00015008543	zgc:162396	100	61.765	ENSMMOG00000005445	zgc:162396	100	61.765	Mola_mola
ENSORLG00015008543	zgc:162396	99	70.480	ENSNBRG00000014954	zgc:162396	99	70.480	Neolamprologus_brichardi
ENSORLG00015008543	zgc:162396	99	71.587	ENSONIG00000004463	zgc:162396	99	71.587	Oreochromis_niloticus
ENSORLG00015008543	zgc:162396	65	36.517	ENSOANG00000015675	-	99	36.517	Ornithorhynchus_anatinus
ENSORLG00015008543	zgc:162396	99	45.556	ENSOANG00000021828	-	96	45.556	Ornithorhynchus_anatinus
ENSORLG00015008543	zgc:162396	61	82.424	ENSORLG00000018107	zgc:162396	96	82.424	Oryzias_latipes
ENSORLG00015008543	zgc:162396	100	90.441	ENSOMEG00000010640	zgc:162396	100	90.441	Oryzias_melastigma
ENSORLG00015008543	zgc:162396	99	57.037	ENSPKIG00000014798	zgc:162396	99	57.037	Paramormyrops_kingsleyae
ENSORLG00015008543	zgc:162396	99	45.588	ENSPSIG00000016701	-	99	45.588	Pelodiscus_sinensis
ENSORLG00015008543	zgc:162396	79	40.367	ENSPMAG00000004744	zgc:162396	92	40.367	Petromyzon_marinus
ENSORLG00015008543	zgc:162396	74	43.137	ENSPMAG00000006166	zgc:162396	100	43.137	Petromyzon_marinus
ENSORLG00015008543	zgc:162396	89	41.393	ENSPMAG00000003743	zgc:162396	99	41.393	Petromyzon_marinus
ENSORLG00015008543	zgc:162396	99	70.849	ENSPFOG00000002666	zgc:162396	99	70.849	Poecilia_formosa
ENSORLG00015008543	zgc:162396	99	71.218	ENSPLAG00000010281	zgc:162396	99	71.218	Poecilia_latipinna
ENSORLG00015008543	zgc:162396	99	71.218	ENSPMEG00000002349	zgc:162396	99	71.218	Poecilia_mexicana
ENSORLG00015008543	zgc:162396	99	71.587	ENSPREG00000016491	zgc:162396	99	71.587	Poecilia_reticulata
ENSORLG00015008543	zgc:162396	99	70.480	ENSPNYG00000009858	zgc:162396	99	70.480	Pundamilia_nyererei
ENSORLG00015008543	zgc:162396	99	62.731	ENSPNAG00000026074	zgc:162396	99	62.731	Pygocentrus_nattereri
ENSORLG00015008543	zgc:162396	99	59.041	ENSPNAG00000004920	zgc:162396	100	59.041	Pygocentrus_nattereri
ENSORLG00015008543	zgc:162396	99	34.173	ENSSHAG00000000950	-	99	34.173	Sarcophilus_harrisii
ENSORLG00015008543	zgc:162396	99	60.517	ENSSFOG00015023495	zgc:162396	99	60.517	Scleropages_formosus
ENSORLG00015008543	zgc:162396	100	58.088	ENSSFOG00015023503	zgc:162396	100	58.088	Scleropages_formosus
ENSORLG00015008543	zgc:162396	99	65.683	ENSSMAG00000004484	zgc:162396	99	65.683	Scophthalmus_maximus
ENSORLG00015008543	zgc:162396	99	67.159	ENSSDUG00000010278	zgc:162396	99	67.159	Seriola_dumerili
ENSORLG00015008543	zgc:162396	99	67.159	ENSSLDG00000021423	zgc:162396	99	67.159	Seriola_lalandi_dorsalis
ENSORLG00015008543	zgc:162396	99	42.963	ENSSPUG00000015532	-	84	42.963	Sphenodon_punctatus
ENSORLG00015008543	zgc:162396	99	68.266	ENSSPAG00000005505	zgc:162396	99	68.266	Stegastes_partitus
ENSORLG00015008543	zgc:162396	68	39.674	ENSTGUG00000015044	-	98	39.674	Taeniopygia_guttata
ENSORLG00015008543	zgc:162396	99	45.556	ENSTGUG00000003861	-	100	45.556	Taeniopygia_guttata
ENSORLG00015008543	zgc:162396	99	59.108	ENSTRUG00000007506	zgc:162396	99	59.108	Takifugu_rubripes
ENSORLG00015008543	zgc:162396	99	54.982	ENSTRUG00000010648	-	99	54.982	Takifugu_rubripes
ENSORLG00015008543	zgc:162396	99	57.353	ENSTNIG00000001485	zgc:162396	100	57.353	Tetraodon_nigroviridis
ENSORLG00015008543	zgc:162396	99	40.959	ENSXETG00000033236	-	97	40.959	Xenopus_tropicalis
ENSORLG00015008543	zgc:162396	99	71.587	ENSXCOG00000014529	zgc:162396	99	71.587	Xiphophorus_couchianus
ENSORLG00015008543	zgc:162396	99	71.956	ENSXMAG00000023129	zgc:162396	99	71.956	Xiphophorus_maculatus