EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015008779 (Gene tree)
Gene ID: -
Gene Symbol: fubp1
Alias: -
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 35661 bases
Position: chr17:4870712-4906372
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015026792	KH_1	PF00013.29	1.4e-68	1	4
ENSORLP00015026792	KH_1	PF00013.29	1.4e-68	2	4
ENSORLP00015026792	KH_1	PF00013.29	1.4e-68	3	4
ENSORLP00015026792	KH_1	PF00013.29	1.4e-68	4	4
ENSORLP00015007798	KH_1	PF00013.29	1.7e-68	1	4
ENSORLP00015007798	KH_1	PF00013.29	1.7e-68	2	4
ENSORLP00015007798	KH_1	PF00013.29	1.7e-68	3	4
ENSORLP00015007798	KH_1	PF00013.29	1.7e-68	4	4
ENSORLP00015007833	KH_1	PF00013.29	2.1e-68	1	4
ENSORLP00015007833	KH_1	PF00013.29	2.1e-68	2	4
ENSORLP00015007833	KH_1	PF00013.29	2.1e-68	3	4
ENSORLP00015007833	KH_1	PF00013.29	2.1e-68	4	4
ENSORLP00015007780	KH_1	PF00013.29	2.2e-68	1	4
ENSORLP00015007780	KH_1	PF00013.29	2.2e-68	2	4
ENSORLP00015007780	KH_1	PF00013.29	2.2e-68	3	4
ENSORLP00015007780	KH_1	PF00013.29	2.2e-68	4	4
ENSORLP00015026883	KH_1	PF00013.29	2.6e-68	1	4
ENSORLP00015026883	KH_1	PF00013.29	2.6e-68	2	4
ENSORLP00015026883	KH_1	PF00013.29	2.6e-68	3	4
ENSORLP00015026883	KH_1	PF00013.29	2.6e-68	4	4
ENSORLP00015007896	KH_1	PF00013.29	2.7e-68	1	4
ENSORLP00015007896	KH_1	PF00013.29	2.7e-68	2	4
ENSORLP00015007896	KH_1	PF00013.29	2.7e-68	3	4
ENSORLP00015007896	KH_1	PF00013.29	2.7e-68	4	4
ENSORLP00015026792	KH_2	PF07650.17	3.9e-21	1	2
ENSORLP00015026792	KH_2	PF07650.17	3.9e-21	2	2
ENSORLP00015007798	KH_2	PF07650.17	7.1e-21	1	2
ENSORLP00015007798	KH_2	PF07650.17	7.1e-21	2	2
ENSORLP00015007833	KH_2	PF07650.17	8.6e-21	1	2
ENSORLP00015007833	KH_2	PF07650.17	8.6e-21	2	2
ENSORLP00015007780	KH_2	PF07650.17	8.8e-21	1	2
ENSORLP00015007780	KH_2	PF07650.17	8.8e-21	2	2
ENSORLP00015026883	KH_2	PF07650.17	1e-20	1	2
ENSORLP00015026883	KH_2	PF07650.17	1e-20	2	2
ENSORLP00015007896	KH_2	PF07650.17	1.1e-20	1	2
ENSORLP00015007896	KH_2	PF07650.17	1.1e-20	2	2
ENSORLP00015007833	DUF1897	PF09005.10	1.3e-15	1	2
ENSORLP00015007833	DUF1897	PF09005.10	1.3e-15	2	2
ENSORLP00015007780	DUF1897	PF09005.10	1.4e-15	1	2
ENSORLP00015007780	DUF1897	PF09005.10	1.4e-15	2	2
ENSORLP00015026883	DUF1897	PF09005.10	1.5e-15	1	2
ENSORLP00015026883	DUF1897	PF09005.10	1.5e-15	2	2
ENSORLP00015007896	DUF1897	PF09005.10	1.6e-15	1	2
ENSORLP00015007896	DUF1897	PF09005.10	1.6e-15	2	2
ENSORLP00015026792	DUF1897	PF09005.10	1e-12	1	2
ENSORLP00015026792	DUF1897	PF09005.10	1e-12	2	2
ENSORLP00015007798	DUF1897	PF09005.10	4.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015001842	-	4174	-	ENSORLP00015007833	662 (aa)	-	-
ENSORLT00015001765	-	4249	-	ENSORLP00015026883	687 (aa)	-	-
ENSORLT00015001996	-	1827	-	ENSORLP00015026792	608 (aa)	-	-
ENSORLT00015001904	-	4149	-	ENSORLP00015007798	633 (aa)	-	-
ENSORLT00015001945	-	2556	-	ENSORLP00015007780	662 (aa)	-	-
ENSORLT00015001732	-	4317	-	ENSORLP00015007896	691 (aa)	-	-

Gene Model

Click here to download ENSORLG00015008779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015008779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015008779	fubp1	59	30.488	ENSORLG00015001778	igf2bp2b	64	30.488
ENSORLG00015008779	fubp1	63	34.286	ENSORLG00015007890	-	74	30.872
ENSORLG00015008779	fubp1	61	30.952	ENSORLG00015015563	igf2bp3	72	30.102
ENSORLG00015008779	fubp1	63	34.286	ENSORLG00015000650	nova1	71	30.201
ENSORLG00015008779	fubp1	62	39.130	ENSORLG00015010679	pcbp2	88	40.541
ENSORLG00015008779	fubp1	53	37.209	ENSORLG00015017819	-	53	37.209
ENSORLG00015008779	fubp1	96	50.334	ENSORLG00015003412	-	94	58.469
ENSORLG00015008779	fubp1	62	40.580	ENSORLG00015013439	PCBP2	77	38.554
ENSORLG00015008779	fubp1	97	48.505	ENSORLG00015007684	fubp3	97	48.625
ENSORLG00015008779	fubp1	57	37.681	ENSORLG00015000429	pcbp3	74	36.842
ENSORLG00015008779	fubp1	56	32.432	ENSORLG00015019262	pcbp4	54	32.432
ENSORLG00015008779	fubp1	97	54.462	ENSORLG00015003791	khsrp	99	54.328
ENSORLG00015008779	fubp1	57	39.394	ENSORLG00015008051	-	72	36.842

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015008779	fubp1	70	77.042	ENSG00000162613	FUBP1	99	70.607	Homo_sapiens
ENSORLG00015008779	fubp1	99	89.617	ENSAPOG00000014845	fubp1	98	89.617	Acanthochromis_polyacanthus
ENSORLG00015008779	fubp1	70	73.375	ENSAMEG00000007372	FUBP1	99	68.318	Ailuropoda_melanoleuca
ENSORLG00015008779	fubp1	100	86.185	ENSACIG00000020024	fubp1	100	86.050	Amphilophus_citrinellus
ENSORLG00015008779	fubp1	100	87.774	ENSAPEG00000012232	fubp1	99	90.291	Amphiprion_percula
ENSORLG00015008779	fubp1	100	93.218	ENSATEG00000018619	fubp1	100	93.930	Anabas_testudineus
ENSORLG00015008779	fubp1	65	78.692	ENSAPLG00000005965	FUBP1	100	69.134	Anas_platyrhynchos
ENSORLG00015008779	fubp1	69	74.207	ENSACAG00000006310	FUBP1	96	67.919	Anolis_carolinensis
ENSORLG00015008779	fubp1	99	92.988	ENSACLG00000006708	fubp1	100	92.553	Astatotilapia_calliptera
ENSORLG00015008779	fubp1	88	83.865	ENSAMXG00000005525	fubp1	100	83.677	Astyanax_mexicanus
ENSORLG00015008779	fubp1	70	77.263	ENSCJAG00000007062	FUBP1	99	70.872	Callithrix_jacchus
ENSORLG00015008779	fubp1	70	77.093	ENSCAFG00000020361	FUBP1	99	70.762	Canis_familiaris
ENSORLG00015008779	fubp1	65	80.645	ENSTSYG00000000148	FUBP1	99	70.978	Carlito_syrichta
ENSORLG00015008779	fubp1	62	76.408	ENSCAPG00000011052	-	65	83.004	Cavia_aperea
ENSORLG00015008779	fubp1	70	77.313	ENSCPOG00000002757	FUBP1	98	70.743	Cavia_porcellus
ENSORLG00015008779	fubp1	90	64.348	ENSCCAG00000036537	FUBP1	100	64.928	Cebus_capucinus
ENSORLG00015008779	fubp1	70	76.872	ENSCATG00000042126	FUBP1	100	69.832	Cercocebus_atys
ENSORLG00015008779	fubp1	70	77.477	ENSCLAG00000005621	FUBP1	100	69.872	Chinchilla_lanigera
ENSORLG00015008779	fubp1	70	76.872	ENSCSAG00000001402	FUBP1	99	70.607	Chlorocebus_sabaeus
ENSORLG00015008779	fubp1	70	76.872	ENSCHOG00000008177	FUBP1	98	70.762	Choloepus_hoffmanni
ENSORLG00015008779	fubp1	69	79.464	ENSCGRG00001007103	Fubp1	99	71.295	Cricetulus_griseus_chok1gshd
ENSORLG00015008779	fubp1	65	78.502	ENSCGRG00000003372	Fubp1	99	70.957	Cricetulus_griseus_crigri
ENSORLG00015008779	fubp1	100	92.114	ENSCSEG00000021412	fubp1	98	92.429	Cynoglossus_semilaevis
ENSORLG00015008779	fubp1	99	93.151	ENSCVAG00000014487	fubp1	99	93.760	Cyprinodon_variegatus
ENSORLG00015008779	fubp1	100	80.828	ENSDARG00000029248	fubp1	100	82.127	Danio_rerio
ENSORLG00015008779	fubp1	81	53.846	ENSDNOG00000034565	-	87	51.613	Dasypus_novemcinctus
ENSORLG00015008779	fubp1	70	78.300	ENSDORG00000016534	Fubp1	98	70.607	Dipodomys_ordii
ENSORLG00015008779	fubp1	75	78.655	ENSETEG00000000948	-	59	78.947	Echinops_telfairi
ENSORLG00015008779	fubp1	74	62.121	ENSEBUG00000016143	fubp1	63	65.000	Eptatretus_burgeri
ENSORLG00015008779	fubp1	69	81.081	ENSEEUG00000001287	FUBP1	88	67.816	Erinaceus_europaeus
ENSORLG00015008779	fubp1	100	82.946	ENSELUG00000007990	fubp1	100	84.030	Esox_lucius
ENSORLG00015008779	fubp1	70	77.384	ENSFALG00000005768	FUBP1	97	68.796	Ficedula_albicollis
ENSORLG00015008779	fubp1	70	77.093	ENSFDAG00000014210	FUBP1	98	70.762	Fukomys_damarensis
ENSORLG00015008779	fubp1	100	92.587	ENSFHEG00000005230	fubp1	100	93.475	Fundulus_heteroclitus
ENSORLG00015008779	fubp1	100	83.125	ENSGMOG00000003370	fubp1	100	83.125	Gadus_morhua
ENSORLG00015008779	fubp1	70	77.876	ENSGALG00000008939	FUBP1	100	69.527	Gallus_gallus
ENSORLG00015008779	fubp1	100	91.318	ENSGAFG00000020972	fubp1	100	92.239	Gambusia_affinis
ENSORLG00015008779	fubp1	100	88.199	ENSGACG00000016563	fubp1	100	88.354	Gasterosteus_aculeatus
ENSORLG00015008779	fubp1	99	93.140	ENSHBUG00000009835	fubp1	100	93.465	Haplochromis_burtoni
ENSORLG00015008779	fubp1	70	77.313	ENSHGLG00000008415	-	100	69.872	Heterocephalus_glaber_female
ENSORLG00015008779	fubp1	72	73.203	ENSHGLG00000002808	-	100	63.220	Heterocephalus_glaber_female
ENSORLG00015008779	fubp1	72	73.856	ENSHGLG00100001414	-	100	63.811	Heterocephalus_glaber_male
ENSORLG00015008779	fubp1	70	77.313	ENSHGLG00100003417	-	99	70.743	Heterocephalus_glaber_male
ENSORLG00015008779	fubp1	100	90.432	ENSHCOG00000000910	fubp1	100	90.936	Hippocampus_comes
ENSORLG00015008779	fubp1	100	80.938	ENSIPUG00000009896	fubp1	100	82.406	Ictalurus_punctatus
ENSORLG00015008779	fubp1	70	80.137	ENSSTOG00000014312	FUBP1	100	70.918	Ictidomys_tridecemlineatus
ENSORLG00015008779	fubp1	70	78.604	ENSJJAG00000020069	Fubp1	98	72.038	Jaculus_jaculus
ENSORLG00015008779	fubp1	99	92.542	ENSKMAG00000018897	fubp1	100	92.564	Kryptolebias_marmoratus
ENSORLG00015008779	fubp1	99	90.519	ENSLBEG00000012700	fubp1	99	90.145	Labrus_bergylta
ENSORLG00015008779	fubp1	97	78.274	ENSLOCG00000003745	fubp1	99	77.778	Lepisosteus_oculatus
ENSORLG00015008779	fubp1	70	73.996	ENSLAFG00000003273	FUBP1	99	72.000	Loxodonta_africana
ENSORLG00015008779	fubp1	70	77.042	ENSMFAG00000031825	FUBP1	100	69.832	Macaca_fascicularis
ENSORLG00015008779	fubp1	70	79.909	ENSMMUG00000002899	FUBP1	98	72.568	Macaca_mulatta
ENSORLG00015008779	fubp1	70	76.872	ENSMNEG00000045212	FUBP1	100	69.832	Macaca_nemestrina
ENSORLG00015008779	fubp1	99	91.916	ENSMAMG00000007489	fubp1	99	92.365	Mastacembelus_armatus
ENSORLG00015008779	fubp1	100	92.891	ENSMZEG00005024298	fubp1	100	93.313	Maylandia_zebra
ENSORLG00015008779	fubp1	65	78.744	ENSMGAG00000009424	FUBP1	100	69.436	Meleagris_gallopavo
ENSORLG00015008779	fubp1	70	77.313	ENSMAUG00000016428	Fubp1	98	70.743	Mesocricetus_auratus
ENSORLG00015008779	fubp1	70	80.137	ENSMOCG00000014751	Fubp1	99	72.727	Microtus_ochrogaster
ENSORLG00015008779	fubp1	87	91.328	ENSMMOG00000019463	fubp1	99	91.667	Mola_mola
ENSORLG00015008779	fubp1	67	71.685	ENSMODG00000020804	FUBP1	100	65.773	Monodelphis_domestica
ENSORLG00015008779	fubp1	100	93.375	ENSMALG00000015173	fubp1	100	93.778	Monopterus_albus
ENSORLG00015008779	fubp1	69	78.842	MGP_CAROLIEiJ_G0025740	Fubp1	99	75.096	Mus_caroli
ENSORLG00015008779	fubp1	69	78.619	ENSMUSG00000028034	Fubp1	99	74.904	Mus_musculus
ENSORLG00015008779	fubp1	69	78.667	MGP_PahariEiJ_G0027191	Fubp1	99	74.952	Mus_pahari
ENSORLG00015008779	fubp1	69	78.842	MGP_SPRETEiJ_G0026693	Fubp1	99	75.096	Mus_spretus
ENSORLG00015008779	fubp1	70	73.222	ENSMLUG00000014802	FUBP1	100	66.809	Myotis_lucifugus
ENSORLG00015008779	fubp1	70	74.165	ENSNGAG00000014302	Fubp1	99	68.487	Nannospalax_galili
ENSORLG00015008779	fubp1	100	88.468	ENSNBRG00000015099	fubp1	99	92.219	Neolamprologus_brichardi
ENSORLG00015008779	fubp1	70	72.807	ENSNLEG00000009772	FUBP1	99	69.302	Nomascus_leucogenys
ENSORLG00015008779	fubp1	78	82.353	ENSMEUG00000007917	-	76	71.795	Notamacropus_eugenii
ENSORLG00015008779	fubp1	88	69.565	ENSOPRG00000001175	FUBP1	91	69.855	Ochotona_princeps
ENSORLG00015008779	fubp1	70	77.313	ENSODEG00000002600	-	98	70.918	Octodon_degus
ENSORLG00015008779	fubp1	99	54.428	ENSODEG00000003657	-	99	50.530	Octodon_degus
ENSORLG00015008779	fubp1	99	93.140	ENSONIG00000018381	fubp1	99	92.610	Oreochromis_niloticus
ENSORLG00015008779	fubp1	60	79.948	ENSOANG00000009777	FUBP1	99	69.417	Ornithorhynchus_anatinus
ENSORLG00015008779	fubp1	100	95.624	ENSORLG00000003540	fubp1	100	95.624	Oryzias_latipes
ENSORLG00015008779	fubp1	100	99.849	ENSORLG00020005908	fubp1	100	99.711	Oryzias_latipes_hni
ENSORLG00015008779	fubp1	99	99.238	ENSOMEG00000021943	fubp1	99	99.106	Oryzias_melastigma
ENSORLG00015008779	fubp1	70	73.069	ENSOGAG00000014233	FUBP1	100	66.911	Otolemur_garnettii
ENSORLG00015008779	fubp1	70	77.263	ENSOARG00000013259	FUBP1	100	72.189	Ovis_aries
ENSORLG00015008779	fubp1	70	77.093	ENSPPRG00000000413	FUBP1	99	70.762	Panthera_pardus
ENSORLG00015008779	fubp1	70	77.093	ENSPTIG00000019450	FUBP1	99	70.762	Panthera_tigris_altaica
ENSORLG00015008779	fubp1	66	77.619	ENSPSIG00000012965	FUBP1	100	68.012	Pelodiscus_sinensis
ENSORLG00015008779	fubp1	99	85.048	ENSPMGG00000009060	fubp1	99	79.847	Periophthalmus_magnuspinnatus
ENSORLG00015008779	fubp1	70	77.728	ENSPEMG00000021802	Fubp1	98	70.983	Peromyscus_maniculatus_bairdii
ENSORLG00015008779	fubp1	62	60.262	ENSPMAG00000001644	-	93	60.262	Petromyzon_marinus
ENSORLG00015008779	fubp1	99	93.607	ENSPFOG00000000238	fubp1	100	94.234	Poecilia_formosa
ENSORLG00015008779	fubp1	100	90.379	ENSPLAG00000021170	fubp1	100	90.895	Poecilia_latipinna
ENSORLG00015008779	fubp1	99	90.762	ENSPMEG00000004747	fubp1	99	95.318	Poecilia_mexicana
ENSORLG00015008779	fubp1	99	93.455	ENSPREG00000017911	fubp1	100	94.082	Poecilia_reticulata
ENSORLG00015008779	fubp1	72	76.509	ENSPPYG00000001219	-	70	77.706	Pongo_abelii
ENSORLG00015008779	fubp1	70	77.042	ENSPCAG00000012617	FUBP1	98	70.717	Procavia_capensis
ENSORLG00015008779	fubp1	70	78.251	ENSPCOG00000024974	FUBP1	99	70.762	Propithecus_coquereli
ENSORLG00015008779	fubp1	70	71.145	ENSPVAG00000014637	FUBP1	98	66.719	Pteropus_vampyrus
ENSORLG00015008779	fubp1	100	92.891	ENSPNYG00000004552	fubp1	100	93.313	Pundamilia_nyererei
ENSORLG00015008779	fubp1	99	83.308	ENSPNAG00000016207	fubp1	100	84.558	Pygocentrus_nattereri
ENSORLG00015008779	fubp1	69	78.842	ENSRNOG00000043370	Fubp1	99	71.139	Rattus_norvegicus
ENSORLG00015008779	fubp1	70	76.872	ENSRBIG00000042950	FUBP1	99	70.607	Rhinopithecus_bieti
ENSORLG00015008779	fubp1	70	76.872	ENSRROG00000043534	FUBP1	99	70.607	Rhinopithecus_roxellana
ENSORLG00015008779	fubp1	70	77.093	ENSSBOG00000027299	FUBP1	97	72.968	Saimiri_boliviensis_boliviensis
ENSORLG00015008779	fubp1	64	78.230	ENSSHAG00000005367	FUBP1	98	72.878	Sarcophilus_harrisii
ENSORLG00015008779	fubp1	99	81.962	ENSSFOG00015010213	fubp1	99	82.192	Scleropages_formosus
ENSORLG00015008779	fubp1	99	88.358	ENSSMAG00000012029	fubp1	98	91.493	Scophthalmus_maximus
ENSORLG00015008779	fubp1	99	92.365	ENSSDUG00000007383	fubp1	98	92.964	Seriola_dumerili
ENSORLG00015008779	fubp1	100	92.248	ENSSLDG00000022863	fubp1	98	92.964	Seriola_lalandi_dorsalis
ENSORLG00015008779	fubp1	70	86.207	ENSSARG00000011730	FUBP1	85	72.401	Sorex_araneus
ENSORLG00015008779	fubp1	99	66.814	ENSSPUG00000008389	FUBP1	100	67.914	Sphenodon_punctatus
ENSORLG00015008779	fubp1	99	93.912	ENSSPAG00000010161	fubp1	100	94.082	Stegastes_partitus
ENSORLG00015008779	fubp1	65	77.804	ENSTGUG00000006841	FUBP1	100	68.643	Taeniopygia_guttata
ENSORLG00015008779	fubp1	99	87.556	ENSTRUG00000004615	fubp1	100	86.706	Takifugu_rubripes
ENSORLG00015008779	fubp1	78	79.762	ENSTBEG00000017333	FUBP1	62	85.714	Tupaia_belangeri
ENSORLG00015008779	fubp1	70	77.093	ENSTTRG00000000096	FUBP1	98	70.607	Tursiops_truncatus
ENSORLG00015008779	fubp1	70	77.093	ENSVPAG00000004709	FUBP1	99	70.607	Vicugna_pacos
ENSORLG00015008779	fubp1	99	84.912	ENSXCOG00000019354	fubp1	99	84.430	Xiphophorus_couchianus
ENSORLG00015008779	fubp1	97	89.221	ENSXMAG00000007168	fubp1	99	94.983	Xiphophorus_maculatus