EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015008893 (Gene tree)
Gene ID: -
Gene Symbol: utp6
Alias: -
Full Name: UTP6%2C small subunit (SSU) processome component%2C homolog (yeast)
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 29598 bases
Position: chr1:9322009-9351606
Accession: ZDB-GENE-040426-769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015027014	U3_assoc_6	PF08640.11	9.1e-25	1	1
ENSORLP00015008070	U3_assoc_6	PF08640.11	2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015001426	-	2038	-	ENSORLP00015027014	551 (aa)	-	-
ENSORLT00015001451	-	1958	-	ENSORLP00015008070	595 (aa)	-	-

Gene Model

Click here to download ENSORLG00015008893's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015008893's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015008893	utp6	99	56.040	ENSG00000108651	UTP6	99	56.040	Homo_sapiens
ENSORLG00015008893	utp6	99	83.838	ENSAPOG00000000435	utp6	99	83.838	Acanthochromis_polyacanthus
ENSORLG00015008893	utp6	99	55.201	ENSAMEG00000005443	UTP6	99	55.201	Ailuropoda_melanoleuca
ENSORLG00015008893	utp6	99	81.313	ENSACIG00000004124	utp6	99	81.313	Amphilophus_citrinellus
ENSORLG00015008893	utp6	99	83.670	ENSAOCG00000016812	utp6	99	83.670	Amphiprion_ocellaris
ENSORLG00015008893	utp6	99	83.333	ENSAPEG00000023565	utp6	99	83.333	Amphiprion_percula
ENSORLG00015008893	utp6	99	85.859	ENSATEG00000003401	utp6	99	85.859	Anabas_testudineus
ENSORLG00015008893	utp6	98	56.176	ENSAPLG00000005821	UTP6	98	56.176	Anas_platyrhynchos
ENSORLG00015008893	utp6	99	58.389	ENSACAG00000009472	UTP6	99	58.389	Anolis_carolinensis
ENSORLG00015008893	utp6	99	55.872	ENSANAG00000034603	UTP6	99	55.872	Aotus_nancymaae
ENSORLG00015008893	utp6	99	84.175	ENSACLG00000006728	utp6	99	84.175	Astatotilapia_calliptera
ENSORLG00015008893	utp6	99	70.707	ENSAMXG00000009478	utp6	99	70.707	Astyanax_mexicanus
ENSORLG00015008893	utp6	99	50.503	ENSBTAG00000003769	-	98	50.503	Bos_taurus
ENSORLG00015008893	utp6	99	51.846	ENSBTAG00000015612	UTP6	99	51.846	Bos_taurus
ENSORLG00015008893	utp6	99	55.872	ENSCJAG00000014115	UTP6	99	55.872	Callithrix_jacchus
ENSORLG00015008893	utp6	99	55.946	ENSCAFG00000018507	UTP6	99	55.946	Canis_familiaris
ENSORLG00015008893	utp6	99	55.946	ENSCAFG00020014678	UTP6	99	55.946	Canis_lupus_dingo
ENSORLG00015008893	utp6	99	52.181	ENSCHIG00000009726	-	99	52.181	Capra_hircus
ENSORLG00015008893	utp6	99	52.181	ENSCHIG00000017954	-	99	52.181	Capra_hircus
ENSORLG00015008893	utp6	100	52.174	ENSTSYG00000002202	UTP6	100	52.174	Carlito_syrichta
ENSORLG00015008893	utp6	89	48.315	ENSCAPG00000017595	UTP6	97	48.315	Cavia_aperea
ENSORLG00015008893	utp6	99	56.376	ENSCPOG00000014294	UTP6	100	56.376	Cavia_porcellus
ENSORLG00015008893	utp6	99	52.013	ENSCCAG00000033318	-	99	52.013	Cebus_capucinus
ENSORLG00015008893	utp6	99	55.779	ENSCATG00000034868	UTP6	99	55.779	Cercocebus_atys
ENSORLG00015008893	utp6	99	56.040	ENSCLAG00000007274	UTP6	99	56.040	Chinchilla_lanigera
ENSORLG00015008893	utp6	99	55.779	ENSCSAG00000006595	UTP6	99	55.779	Chlorocebus_sabaeus
ENSORLG00015008893	utp6	73	45.290	ENSCHOG00000010940	-	73	45.290	Choloepus_hoffmanni
ENSORLG00015008893	utp6	99	60.403	ENSCPBG00000004652	UTP6	99	60.403	Chrysemys_picta_bellii
ENSORLG00015008893	utp6	99	32.736	ENSCING00000022947	-	99	32.736	Ciona_intestinalis
ENSORLG00015008893	utp6	54	37.309	ENSCSAVG00000011416	-	99	37.309	Ciona_savignyi
ENSORLG00015008893	utp6	89	40.789	ENSCANG00000031141	UTP6	91	40.789	Colobus_angolensis_palliatus
ENSORLG00015008893	utp6	99	55.779	ENSCGRG00001000046	Utp6	100	55.779	Cricetulus_griseus_chok1gshd
ENSORLG00015008893	utp6	95	54.417	ENSCGRG00000011543	Utp6	100	54.417	Cricetulus_griseus_crigri
ENSORLG00015008893	utp6	99	73.782	ENSCSEG00000013422	utp6	99	94.286	Cynoglossus_semilaevis
ENSORLG00015008893	utp6	99	82.323	ENSCVAG00000020322	utp6	99	82.323	Cyprinodon_variegatus
ENSORLG00015008893	utp6	99	68.013	ENSDARG00000098433	utp6	100	76.796	Danio_rerio
ENSORLG00015008893	utp6	99	56.114	ENSDNOG00000037018	UTP6	99	56.114	Dasypus_novemcinctus
ENSORLG00015008893	utp6	95	53.982	ENSDORG00000003843	Utp6	99	56.618	Dipodomys_ordii
ENSORLG00015008893	utp6	99	56.616	ENSEASG00005010870	UTP6	99	56.616	Equus_asinus_asinus
ENSORLG00015008893	utp6	99	56.616	ENSECAG00000022217	UTP6	99	56.616	Equus_caballus
ENSORLG00015008893	utp6	99	73.569	ENSELUG00000006618	utp6	99	73.569	Esox_lucius
ENSORLG00015008893	utp6	99	54.758	ENSFCAG00000015795	UTP6	99	54.758	Felis_catus
ENSORLG00015008893	utp6	99	59.396	ENSFALG00000002282	UTP6	99	59.396	Ficedula_albicollis
ENSORLG00015008893	utp6	99	56.040	ENSFDAG00000019506	UTP6	100	56.040	Fukomys_damarensis
ENSORLG00015008893	utp6	99	81.650	ENSFHEG00000010373	utp6	99	81.650	Fundulus_heteroclitus
ENSORLG00015008893	utp6	99	73.232	ENSGMOG00000011958	utp6	99	73.232	Gadus_morhua
ENSORLG00015008893	utp6	99	59.228	ENSGALG00000003260	UTP6	99	59.228	Gallus_gallus
ENSORLG00015008893	utp6	99	84.175	ENSGAFG00000008505	utp6	99	84.175	Gambusia_affinis
ENSORLG00015008893	utp6	99	81.987	ENSGACG00000019424	utp6	99	81.987	Gasterosteus_aculeatus
ENSORLG00015008893	utp6	99	60.235	ENSGAGG00000004820	UTP6	99	60.235	Gopherus_agassizii
ENSORLG00015008893	utp6	99	56.376	ENSGGOG00000013569	UTP6	99	56.376	Gorilla_gorilla
ENSORLG00015008893	utp6	99	45.455	ENSGGOG00000026003	-	99	45.455	Gorilla_gorilla
ENSORLG00015008893	utp6	99	84.175	ENSHBUG00000018668	utp6	99	84.175	Haplochromis_burtoni
ENSORLG00015008893	utp6	99	55.705	ENSHGLG00000010332	UTP6	100	55.705	Heterocephalus_glaber_female
ENSORLG00015008893	utp6	99	51.433	ENSHGLG00000008642	-	99	51.433	Heterocephalus_glaber_female
ENSORLG00015008893	utp6	99	52.685	ENSHGLG00100014271	-	100	52.685	Heterocephalus_glaber_male
ENSORLG00015008893	utp6	95	52.465	ENSHGLG00100006047	-	99	52.465	Heterocephalus_glaber_male
ENSORLG00015008893	utp6	99	76.936	ENSHCOG00000017277	utp6	99	76.936	Hippocampus_comes
ENSORLG00015008893	utp6	99	70.539	ENSIPUG00000022587	Utp6	99	70.539	Ictalurus_punctatus
ENSORLG00015008893	utp6	99	57.525	ENSSTOG00000015875	UTP6	100	57.525	Ictidomys_tridecemlineatus
ENSORLG00015008893	utp6	99	84.680	ENSKMAG00000021631	utp6	99	84.680	Kryptolebias_marmoratus
ENSORLG00015008893	utp6	99	82.997	ENSLBEG00000002115	utp6	99	82.997	Labrus_bergylta
ENSORLG00015008893	utp6	99	62.248	ENSLACG00000017158	UTP6	99	62.248	Latimeria_chalumnae
ENSORLG00015008893	utp6	91	66.972	ENSLOCG00000013797	utp6	90	66.972	Lepisosteus_oculatus
ENSORLG00015008893	utp6	99	55.946	ENSLAFG00000013008	UTP6	99	55.946	Loxodonta_africana
ENSORLG00015008893	utp6	99	55.779	ENSMFAG00000038842	UTP6	99	55.779	Macaca_fascicularis
ENSORLG00015008893	utp6	99	36.762	ENSMFAG00000041904	-	99	36.762	Macaca_fascicularis
ENSORLG00015008893	utp6	99	55.779	ENSMMUG00000020403	UTP6	99	55.779	Macaca_mulatta
ENSORLG00015008893	utp6	99	55.779	ENSMNEG00000039480	UTP6	99	55.779	Macaca_nemestrina
ENSORLG00015008893	utp6	99	49.246	ENSMLEG00000032174	UTP6	99	49.581	Mandrillus_leucophaeus
ENSORLG00015008893	utp6	99	43.960	ENSMLEG00000039364	-	99	43.960	Mandrillus_leucophaeus
ENSORLG00015008893	utp6	99	84.848	ENSMAMG00000002228	utp6	99	84.848	Mastacembelus_armatus
ENSORLG00015008893	utp6	99	84.175	ENSMZEG00005023895	utp6	99	84.175	Maylandia_zebra
ENSORLG00015008893	utp6	95	57.848	ENSMGAG00000008111	UTP6	99	57.848	Meleagris_gallopavo
ENSORLG00015008893	utp6	99	55.853	ENSMAUG00000021895	Utp6	100	55.853	Mesocricetus_auratus
ENSORLG00015008893	utp6	99	54.348	ENSMICG00000002632	UTP6	99	54.348	Microcebus_murinus
ENSORLG00015008893	utp6	99	55.184	ENSMOCG00000014163	Utp6	100	55.184	Microtus_ochrogaster
ENSORLG00015008893	utp6	99	77.946	ENSMMOG00000008653	utp6	99	86.441	Mola_mola
ENSORLG00015008893	utp6	99	57.886	ENSMODG00000019206	UTP6	99	57.789	Monodelphis_domestica
ENSORLG00015008893	utp6	99	85.017	ENSMALG00000021112	utp6	99	85.017	Monopterus_albus
ENSORLG00015008893	utp6	99	55.686	MGP_CAROLIEiJ_G0016828	Utp6	100	55.686	Mus_caroli
ENSORLG00015008893	utp6	99	55.853	ENSMUSG00000035575	Utp6	100	55.853	Mus_musculus
ENSORLG00015008893	utp6	99	51.338	MGP_PahariEiJ_G0017965	Utp6	100	51.672	Mus_pahari
ENSORLG00015008893	utp6	99	55.351	MGP_SPRETEiJ_G0017672	Utp6	100	55.351	Mus_spretus
ENSORLG00015008893	utp6	99	54.698	ENSMPUG00000014581	UTP6	99	54.698	Mustela_putorius_furo
ENSORLG00015008893	utp6	99	56.114	ENSMLUG00000016422	UTP6	99	56.114	Myotis_lucifugus
ENSORLG00015008893	utp6	99	56.020	ENSNGAG00000015482	Utp6	100	56.020	Nannospalax_galili
ENSORLG00015008893	utp6	99	84.007	ENSNBRG00000019714	utp6	99	84.007	Neolamprologus_brichardi
ENSORLG00015008893	utp6	99	55.369	ENSNLEG00000011009	UTP6	99	55.369	Nomascus_leucogenys
ENSORLG00015008893	utp6	88	59.574	ENSOPRG00000008446	-	89	59.574	Ochotona_princeps
ENSORLG00015008893	utp6	66	61.603	ENSODEG00000011971	UTP6	99	61.603	Octodon_degus
ENSORLG00015008893	utp6	99	83.502	ENSONIG00000018090	utp6	99	83.502	Oreochromis_niloticus
ENSORLG00015008893	utp6	98	55.537	ENSOANG00000004279	UTP6	99	55.537	Ornithorhynchus_anatinus
ENSORLG00015008893	utp6	99	55.276	ENSOCUG00000016980	UTP6	99	55.276	Oryctolagus_cuniculus
ENSORLG00015008893	utp6	100	98.992	ENSORLG00000003546	utp6	64	98.992	Oryzias_latipes
ENSORLG00015008893	utp6	100	98.992	ENSORLG00020010377	utp6	100	98.992	Oryzias_latipes_hni
ENSORLG00015008893	utp6	99	91.751	ENSOMEG00000017487	utp6	99	91.751	Oryzias_melastigma
ENSORLG00015008893	utp6	87	49.143	ENSOGAG00000004511	UTP6	100	49.143	Otolemur_garnettii
ENSORLG00015008893	utp6	99	52.349	ENSOARG00000013474	UTP6	99	52.349	Ovis_aries
ENSORLG00015008893	utp6	99	56.208	ENSPPAG00000038089	UTP6	99	56.208	Pan_paniscus
ENSORLG00015008893	utp6	99	46.296	ENSPPAG00000016895	-	99	46.296	Pan_paniscus
ENSORLG00015008893	utp6	99	56.856	ENSPPRG00000001010	UTP6	99	56.856	Panthera_pardus
ENSORLG00015008893	utp6	99	56.856	ENSPTIG00000013913	UTP6	99	56.856	Panthera_tigris_altaica
ENSORLG00015008893	utp6	99	56.208	ENSPTRG00000008977	UTP6	99	56.208	Pan_troglodytes
ENSORLG00015008893	utp6	99	46.296	ENSPTRG00000044798	-	99	46.296	Pan_troglodytes
ENSORLG00015008893	utp6	99	43.361	ENSPANG00000034274	-	99	43.361	Papio_anubis
ENSORLG00015008893	utp6	99	53.679	ENSPANG00000023113	UTP6	99	53.679	Papio_anubis
ENSORLG00015008893	utp6	99	70.067	ENSPKIG00000004653	utp6	99	70.067	Paramormyrops_kingsleyae
ENSORLG00015008893	utp6	99	60.672	ENSPSIG00000012435	UTP6	99	60.672	Pelodiscus_sinensis
ENSORLG00015008893	utp6	99	82.660	ENSPMGG00000009548	utp6	99	82.660	Periophthalmus_magnuspinnatus
ENSORLG00015008893	utp6	99	54.682	ENSPEMG00000014081	Utp6	100	54.682	Peromyscus_maniculatus_bairdii
ENSORLG00015008893	utp6	93	45.293	ENSPMAG00000009561	utp6	99	45.293	Petromyzon_marinus
ENSORLG00015008893	utp6	99	59.631	ENSPCIG00000029968	UTP6	86	59.631	Phascolarctos_cinereus
ENSORLG00015008893	utp6	99	82.997	ENSPFOG00000013918	utp6	99	82.997	Poecilia_formosa
ENSORLG00015008893	utp6	99	82.492	ENSPLAG00000017825	utp6	99	82.492	Poecilia_latipinna
ENSORLG00015008893	utp6	99	83.165	ENSPMEG00000008133	utp6	99	83.165	Poecilia_mexicana
ENSORLG00015008893	utp6	99	80.135	ENSPREG00000013108	utp6	99	80.135	Poecilia_reticulata
ENSORLG00015008893	utp6	99	53.356	ENSPPYG00000008154	UTP6	99	53.356	Pongo_abelii
ENSORLG00015008893	utp6	99	54.682	ENSPCOG00000010224	UTP6	99	54.682	Propithecus_coquereli
ENSORLG00015008893	utp6	99	52.508	ENSPVAG00000015759	UTP6	99	52.508	Pteropus_vampyrus
ENSORLG00015008893	utp6	99	84.007	ENSPNYG00000002290	utp6	99	84.007	Pundamilia_nyererei
ENSORLG00015008893	utp6	99	69.024	ENSPNAG00000027370	utp6	99	69.024	Pygocentrus_nattereri
ENSORLG00015008893	utp6	99	54.515	ENSRNOG00000014209	Utp6	100	54.515	Rattus_norvegicus
ENSORLG00015008893	utp6	99	55.611	ENSRBIG00000020822	UTP6	99	55.611	Rhinopithecus_bieti
ENSORLG00015008893	utp6	99	55.611	ENSRROG00000036838	UTP6	99	55.611	Rhinopithecus_roxellana
ENSORLG00015008893	utp6	50	59.468	ENSSHAG00000018792	-	98	59.468	Sarcophilus_harrisii
ENSORLG00015008893	utp6	99	69.849	ENSSFOG00015005978	utp6	99	69.849	Scleropages_formosus
ENSORLG00015008893	utp6	99	86.364	ENSSMAG00000014772	utp6	99	86.364	Scophthalmus_maximus
ENSORLG00015008893	utp6	99	86.532	ENSSDUG00000000329	utp6	99	86.532	Seriola_dumerili
ENSORLG00015008893	utp6	99	85.354	ENSSLDG00000016724	utp6	99	85.354	Seriola_lalandi_dorsalis
ENSORLG00015008893	utp6	100	49.917	ENSSARG00000010778	UTP6	100	49.917	Sorex_araneus
ENSORLG00015008893	utp6	99	59.564	ENSSPUG00000005273	UTP6	99	59.564	Sphenodon_punctatus
ENSORLG00015008893	utp6	99	82.155	ENSSPAG00000011871	utp6	99	82.155	Stegastes_partitus
ENSORLG00015008893	utp6	99	56.522	ENSSSCG00000017745	UTP6	99	56.522	Sus_scrofa
ENSORLG00015008893	utp6	99	59.060	ENSTGUG00000004999	UTP6	99	59.060	Taeniopygia_guttata
ENSORLG00015008893	utp6	99	78.620	ENSTRUG00000012005	utp6	100	78.620	Takifugu_rubripes
ENSORLG00015008893	utp6	99	78.114	ENSTNIG00000003235	utp6	100	78.114	Tetraodon_nigroviridis
ENSORLG00015008893	utp6	67	57.459	ENSTBEG00000005388	-	67	57.459	Tupaia_belangeri
ENSORLG00015008893	utp6	99	55.611	ENSTTRG00000009911	UTP6	99	55.611	Tursiops_truncatus
ENSORLG00015008893	utp6	100	55.426	ENSUMAG00000015139	UTP6	100	55.426	Ursus_maritimus
ENSORLG00015008893	utp6	99	55.946	ENSVPAG00000005782	UTP6	99	55.946	Vicugna_pacos
ENSORLG00015008893	utp6	99	56.114	ENSVVUG00000012238	UTP6	99	56.114	Vulpes_vulpes
ENSORLG00015008893	utp6	99	49.750	ENSXETG00000020057	utp6	99	49.750	Xenopus_tropicalis
ENSORLG00015008893	utp6	99	82.550	ENSXCOG00000013626	utp6	99	91.892	Xiphophorus_couchianus
ENSORLG00015008893	utp6	99	82.997	ENSXMAG00000017414	utp6	99	82.997	Xiphophorus_maculatus