EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015009045 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: -
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 19031 bases
Position: chr9:9671374-9690404
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015008223	ResIII	PF04851.15	1.2e-06	1	1
ENSORLP00015008247	ResIII	PF04851.15	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015001147	-	5959	-	ENSORLP00015008247	1052 (aa)	-	-
ENSORLT00015001177	-	5863	-	ENSORLP00015008223	1020 (aa)	-	-

Gene Model

Click here to download ENSORLG00015009045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009045's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009045	smarcad1a	69	61.454	ENSG00000163104	SMARCAD1	99	66.498	Homo_sapiens
ENSORLG00015009045	smarcad1a	100	73.246	ENSAPOG00000011446	smarcad1a	100	73.041	Acanthochromis_polyacanthus
ENSORLG00015009045	smarcad1a	92	61.188	ENSAMEG00000005844	SMARCAD1	93	64.910	Ailuropoda_melanoleuca
ENSORLG00015009045	smarcad1a	68	86.252	ENSACIG00000018326	smarcad1a	93	83.634	Amphilophus_citrinellus
ENSORLG00015009045	smarcad1a	100	73.277	ENSAOCG00000019762	smarcad1a	100	72.812	Amphiprion_ocellaris
ENSORLG00015009045	smarcad1a	100	73.557	ENSAPEG00000003889	smarcad1a	100	73.091	Amphiprion_percula
ENSORLG00015009045	smarcad1a	95	72.305	ENSATEG00000015608	smarcad1a	99	71.810	Anabas_testudineus
ENSORLG00015009045	smarcad1a	77	66.355	ENSAPLG00000004630	SMARCAD1	89	64.608	Anas_platyrhynchos
ENSORLG00015009045	smarcad1a	63	64.157	ENSACAG00000013554	SMARCAD1	63	65.888	Anolis_carolinensis
ENSORLG00015009045	smarcad1a	84	61.348	ENSANAG00000020488	SMARCAD1	89	64.910	Aotus_nancymaae
ENSORLG00015009045	smarcad1a	100	70.877	ENSACLG00000017063	smarcad1a	100	71.107	Astatotilapia_calliptera
ENSORLG00015009045	smarcad1a	71	71.659	ENSAMXG00000019130	smarcad1b	77	74.233	Astyanax_mexicanus
ENSORLG00015009045	smarcad1a	65	70.546	ENSAMXG00000015470	smarcad1a	92	72.644	Astyanax_mexicanus
ENSORLG00015009045	smarcad1a	68	61.379	ENSBTAG00000017061	SMARCAD1	65	65.015	Bos_taurus
ENSORLG00015009045	smarcad1a	62	42.192	WBGene00010845	M03C11.8	66	42.185	Caenorhabditis_elegans
ENSORLG00015009045	smarcad1a	69	61.348	ENSCJAG00000006778	SMARCAD1	65	64.910	Callithrix_jacchus
ENSORLG00015009045	smarcad1a	92	61.464	ENSCAFG00000010026	SMARCAD1	93	65.211	Canis_familiaris
ENSORLG00015009045	smarcad1a	84	61.464	ENSCAFG00020003994	SMARCAD1	91	65.211	Canis_lupus_dingo
ENSORLG00015009045	smarcad1a	68	61.188	ENSCHIG00000012905	SMARCAD1	65	64.910	Capra_hircus
ENSORLG00015009045	smarcad1a	69	61.210	ENSTSYG00000002706	SMARCAD1	65	64.759	Carlito_syrichta
ENSORLG00015009045	smarcad1a	91	55.831	ENSCAPG00000016744	SMARCAD1	88	60.000	Cavia_aperea
ENSORLG00015009045	smarcad1a	68	61.272	ENSCPOG00000011398	SMARCAD1	64	65.060	Cavia_porcellus
ENSORLG00015009045	smarcad1a	69	61.348	ENSCCAG00000022264	SMARCAD1	99	66.498	Cebus_capucinus
ENSORLG00015009045	smarcad1a	84	61.348	ENSCATG00000035663	SMARCAD1	91	64.910	Cercocebus_atys
ENSORLG00015009045	smarcad1a	84	58.597	ENSCSAG00000004186	SMARCAD1	92	64.910	Chlorocebus_sabaeus
ENSORLG00015009045	smarcad1a	86	61.180	ENSCPBG00000013203	SMARCAD1	91	66.667	Chrysemys_picta_bellii
ENSORLG00015009045	smarcad1a	62	49.242	ENSCING00000001688	-	99	49.472	Ciona_intestinalis
ENSORLG00015009045	smarcad1a	69	61.210	ENSCANG00000003556	SMARCAD1	99	66.498	Colobus_angolensis_palliatus
ENSORLG00015009045	smarcad1a	64	63.798	ENSCGRG00001015056	Smarcad1	65	65.060	Cricetulus_griseus_chok1gshd
ENSORLG00015009045	smarcad1a	64	63.798	ENSCGRG00000014087	Smarcad1	65	65.060	Cricetulus_griseus_crigri
ENSORLG00015009045	smarcad1a	100	64.706	ENSCSEG00000014419	-	100	64.717	Cynoglossus_semilaevis
ENSORLG00015009045	smarcad1a	100	64.880	ENSCSEG00000017903	smarcad1a	100	64.875	Cynoglossus_semilaevis
ENSORLG00015009045	smarcad1a	100	57.306	ENSDARG00000014041	smarcad1a	100	56.764	Danio_rerio
ENSORLG00015009045	smarcad1a	83	73.886	ENSDARG00000073721	smarcad1b	91	73.252	Danio_rerio
ENSORLG00015009045	smarcad1a	69	61.043	ENSDNOG00000000806	-	65	64.910	Dasypus_novemcinctus
ENSORLG00015009045	smarcad1a	100	47.227	ENSDORG00000012331	Smarcad1	63	65.835	Dipodomys_ordii
ENSORLG00015009045	smarcad1a	61	44.717	FBgn0032157	Etl1	78	44.694	Drosophila_melanogaster
ENSORLG00015009045	smarcad1a	60	47.484	ENSEBUG00000003969	smarcad1a	94	47.934	Eptatretus_burgeri
ENSORLG00015009045	smarcad1a	68	61.272	ENSEASG00005012382	SMARCAD1	74	63.308	Equus_asinus_asinus
ENSORLG00015009045	smarcad1a	68	61.272	ENSECAG00000011562	SMARCAD1	65	64.910	Equus_caballus
ENSORLG00015009045	smarcad1a	71	69.848	ENSELUG00000019154	smarcad1b	75	70.279	Esox_lucius
ENSORLG00015009045	smarcad1a	100	64.212	ENSELUG00000018535	smarcad1a	100	64.212	Esox_lucius
ENSORLG00015009045	smarcad1a	68	61.411	ENSFCAG00000003958	SMARCAD1	99	66.667	Felis_catus
ENSORLG00015009045	smarcad1a	68	62.102	ENSFALG00000006089	SMARCAD1	64	65.361	Ficedula_albicollis
ENSORLG00015009045	smarcad1a	68	61.272	ENSFDAG00000017027	SMARCAD1	65	65.060	Fukomys_damarensis
ENSORLG00015009045	smarcad1a	100	67.367	ENSFHEG00000012778	smarcad1a	100	67.459	Fundulus_heteroclitus
ENSORLG00015009045	smarcad1a	84	76.011	ENSGMOG00000018995	smarcad1a	97	77.253	Gadus_morhua
ENSORLG00015009045	smarcad1a	72	60.414	ENSGALG00000037339	SMARCAD1	86	63.595	Gallus_gallus
ENSORLG00015009045	smarcad1a	100	65.458	ENSGAFG00000013498	smarcad1a	100	65.608	Gambusia_affinis
ENSORLG00015009045	smarcad1a	83	80.753	ENSGACG00000007327	smarcad1a	97	82.117	Gasterosteus_aculeatus
ENSORLG00015009045	smarcad1a	100	49.170	ENSGAGG00000008582	SMARCAD1	63	66.822	Gopherus_agassizii
ENSORLG00015009045	smarcad1a	69	61.348	ENSGGOG00000023001	SMARCAD1	65	64.910	Gorilla_gorilla
ENSORLG00015009045	smarcad1a	100	70.971	ENSHBUG00000011042	smarcad1a	100	71.107	Haplochromis_burtoni
ENSORLG00015009045	smarcad1a	68	61.272	ENSHGLG00000005070	SMARCAD1	65	65.060	Heterocephalus_glaber_female
ENSORLG00015009045	smarcad1a	68	61.272	ENSHGLG00100006812	SMARCAD1	65	65.060	Heterocephalus_glaber_male
ENSORLG00015009045	smarcad1a	100	59.375	ENSHCOG00000007848	smarcad1a	100	59.249	Hippocampus_comes
ENSORLG00015009045	smarcad1a	98	56.788	ENSIPUG00000000242	smarcad1a	97	58.800	Ictalurus_punctatus
ENSORLG00015009045	smarcad1a	62	72.393	ENSIPUG00000022817	smarcad1b	70	72.393	Ictalurus_punctatus
ENSORLG00015009045	smarcad1a	69	61.210	ENSSTOG00000001227	SMARCAD1	65	64.608	Ictidomys_tridecemlineatus
ENSORLG00015009045	smarcad1a	100	47.500	ENSJJAG00000022342	Smarcad1	65	64.759	Jaculus_jaculus
ENSORLG00015009045	smarcad1a	99	70.699	ENSKMAG00000021351	smarcad1a	99	71.361	Kryptolebias_marmoratus
ENSORLG00015009045	smarcad1a	100	67.981	ENSLBEG00000008088	smarcad1a	99	68.972	Labrus_bergylta
ENSORLG00015009045	smarcad1a	84	73.733	ENSLOCG00000012909	smarcad1a	93	73.182	Lepisosteus_oculatus
ENSORLG00015009045	smarcad1a	68	60.028	ENSLAFG00000000040	SMARCAD1	65	63.102	Loxodonta_africana
ENSORLG00015009045	smarcad1a	84	61.348	ENSMFAG00000042606	SMARCAD1	91	64.910	Macaca_fascicularis
ENSORLG00015009045	smarcad1a	84	61.348	ENSMMUG00000022242	SMARCAD1	91	64.910	Macaca_mulatta
ENSORLG00015009045	smarcad1a	69	61.348	ENSMNEG00000038117	SMARCAD1	99	66.498	Macaca_nemestrina
ENSORLG00015009045	smarcad1a	69	61.348	ENSMLEG00000038333	SMARCAD1	99	66.498	Mandrillus_leucophaeus
ENSORLG00015009045	smarcad1a	100	72.123	ENSMAMG00000000933	smarcad1a	100	72.650	Mastacembelus_armatus
ENSORLG00015009045	smarcad1a	100	70.510	ENSMZEG00005005203	smarcad1a	100	70.179	Maylandia_zebra
ENSORLG00015009045	smarcad1a	80	63.836	ENSMGAG00000005577	SMARCAD1	84	63.836	Meleagris_gallopavo
ENSORLG00015009045	smarcad1a	69	61.043	ENSMAUG00000008417	Smarcad1	65	65.361	Mesocricetus_auratus
ENSORLG00015009045	smarcad1a	69	61.612	ENSMICG00000009746	SMARCAD1	65	65.165	Microcebus_murinus
ENSORLG00015009045	smarcad1a	69	60.219	ENSMOCG00000017142	Smarcad1	65	65.060	Microtus_ochrogaster
ENSORLG00015009045	smarcad1a	70	82.665	ENSMMOG00000000275	smarcad1a	99	82.523	Mola_mola
ENSORLG00015009045	smarcad1a	66	60.989	ENSMODG00000019268	SMARCAD1	65	65.361	Monodelphis_domestica
ENSORLG00015009045	smarcad1a	81	63.798	MGP_CAROLIEiJ_G0028458	-	66	63.339	Mus_caroli
ENSORLG00015009045	smarcad1a	64	63.798	ENSMUSG00000029920	Smarcad1	63	66.303	Mus_musculus
ENSORLG00015009045	smarcad1a	100	47.963	MGP_PahariEiJ_G0022198	Smarcad1	63	66.303	Mus_pahari
ENSORLG00015009045	smarcad1a	64	63.798	MGP_SPRETEiJ_G0029462	Smarcad1	63	66.303	Mus_spretus
ENSORLG00015009045	smarcad1a	68	61.188	ENSMPUG00000002111	SMARCAD1	65	64.910	Mustela_putorius_furo
ENSORLG00015009045	smarcad1a	100	47.900	ENSMLUG00000000425	SMARCAD1	63	66.407	Myotis_lucifugus
ENSORLG00015009045	smarcad1a	68	60.882	ENSNGAG00000000810	Smarcad1	65	64.608	Nannospalax_galili
ENSORLG00015009045	smarcad1a	74	76.276	ENSNBRG00000012749	smarcad1a	94	75.255	Neolamprologus_brichardi
ENSORLG00015009045	smarcad1a	69	61.348	ENSNLEG00000014225	SMARCAD1	99	66.498	Nomascus_leucogenys
ENSORLG00015009045	smarcad1a	68	61.348	ENSODEG00000004334	SMARCAD1	65	64.910	Octodon_degus
ENSORLG00015009045	smarcad1a	84	84.399	ENSONIG00000015059	smarcad1a	100	83.232	Oreochromis_niloticus
ENSORLG00015009045	smarcad1a	72	66.112	ENSOANG00000013764	SMARCAD1	91	65.714	Ornithorhynchus_anatinus
ENSORLG00015009045	smarcad1a	69	61.317	ENSOCUG00000017283	SMARCAD1	65	65.060	Oryctolagus_cuniculus
ENSORLG00015009045	smarcad1a	100	98.099	ENSORLG00000004869	smarcad1a	100	98.099	Oryzias_latipes
ENSORLG00015009045	smarcad1a	100	98.764	ENSORLG00020020569	smarcad1a	100	98.764	Oryzias_latipes_hni
ENSORLG00015009045	smarcad1a	99	87.048	ENSOMEG00000023032	smarcad1a	100	86.857	Oryzias_melastigma
ENSORLG00015009045	smarcad1a	68	60.905	ENSOGAG00000011444	SMARCAD1	65	64.565	Otolemur_garnettii
ENSORLG00015009045	smarcad1a	68	61.188	ENSOARG00000017851	SMARCAD1	65	64.910	Ovis_aries
ENSORLG00015009045	smarcad1a	69	61.348	ENSPPAG00000035715	SMARCAD1	65	64.910	Pan_paniscus
ENSORLG00015009045	smarcad1a	68	61.411	ENSPPRG00000024756	SMARCAD1	99	66.667	Panthera_pardus
ENSORLG00015009045	smarcad1a	68	61.517	ENSPTIG00000017868	SMARCAD1	65	65.165	Panthera_tigris_altaica
ENSORLG00015009045	smarcad1a	69	61.348	ENSPTRG00000023126	SMARCAD1	99	66.498	Pan_troglodytes
ENSORLG00015009045	smarcad1a	69	60.000	ENSPANG00000019757	SMARCAD1	65	63.418	Papio_anubis
ENSORLG00015009045	smarcad1a	91	61.918	ENSPSIG00000010255	SMARCAD1	91	67.601	Pelodiscus_sinensis
ENSORLG00015009045	smarcad1a	61	77.125	ENSPMGG00000010735	smarcad1a	93	76.935	Periophthalmus_magnuspinnatus
ENSORLG00015009045	smarcad1a	69	53.425	ENSPEMG00000001854	Smarcad1	65	56.863	Peromyscus_maniculatus_bairdii
ENSORLG00015009045	smarcad1a	94	53.919	ENSPMAG00000003516	smarcad1a	92	57.485	Petromyzon_marinus
ENSORLG00015009045	smarcad1a	76	64.897	ENSPCIG00000008137	SMARCAD1	89	65.813	Phascolarctos_cinereus
ENSORLG00015009045	smarcad1a	100	67.666	ENSPFOG00000019116	smarcad1a	100	67.727	Poecilia_formosa
ENSORLG00015009045	smarcad1a	100	67.151	ENSPLAG00000000108	smarcad1a	100	67.575	Poecilia_latipinna
ENSORLG00015009045	smarcad1a	100	67.666	ENSPMEG00000009155	smarcad1a	100	67.727	Poecilia_mexicana
ENSORLG00015009045	smarcad1a	100	69.463	ENSPREG00000018185	smarcad1a	100	69.557	Poecilia_reticulata
ENSORLG00015009045	smarcad1a	69	61.180	ENSPPYG00000014935	SMARCAD1	65	64.715	Pongo_abelii
ENSORLG00015009045	smarcad1a	71	51.383	ENSPCOG00000020478	SMARCAD1	74	55.271	Propithecus_coquereli
ENSORLG00015009045	smarcad1a	68	61.080	ENSPVAG00000001760	SMARCAD1	64	64.404	Pteropus_vampyrus
ENSORLG00015009045	smarcad1a	72	76.671	ENSPNYG00000010087	smarcad1a	92	77.516	Pundamilia_nyererei
ENSORLG00015009045	smarcad1a	64	71.875	ENSPNAG00000010099	smarcad1b	70	73.620	Pygocentrus_nattereri
ENSORLG00015009045	smarcad1a	100	58.034	ENSPNAG00000001663	smarcad1a	100	57.507	Pygocentrus_nattereri
ENSORLG00015009045	smarcad1a	69	60.959	ENSRNOG00000006391	Smarcad1	63	66.459	Rattus_norvegicus
ENSORLG00015009045	smarcad1a	69	61.348	ENSRBIG00000041989	SMARCAD1	65	64.910	Rhinopithecus_bieti
ENSORLG00015009045	smarcad1a	69	61.348	ENSRROG00000035309	SMARCAD1	65	64.910	Rhinopithecus_roxellana
ENSORLG00015009045	smarcad1a	69	61.348	ENSSBOG00000032114	SMARCAD1	99	66.498	Saimiri_boliviensis_boliviensis
ENSORLG00015009045	smarcad1a	63	64.933	ENSSHAG00000001279	SMARCAD1	65	65.512	Sarcophilus_harrisii
ENSORLG00015009045	smarcad1a	67	68.671	ENSSFOG00015020909	smarcad1a	92	69.928	Scleropages_formosus
ENSORLG00015009045	smarcad1a	86	75.635	ENSSFOG00015016814	smarcad1b	90	76.097	Scleropages_formosus
ENSORLG00015009045	smarcad1a	100	70.446	ENSSMAG00000001326	smarcad1a	100	70.539	Scophthalmus_maximus
ENSORLG00015009045	smarcad1a	73	78.599	ENSSDUG00000022338	smarcad1a	92	78.553	Seriola_dumerili
ENSORLG00015009045	smarcad1a	100	69.694	ENSSLDG00000024986	smarcad1a	100	70.148	Seriola_lalandi_dorsalis
ENSORLG00015009045	smarcad1a	56	67.059	ENSSPUG00000004633	SMARCAD1	99	67.059	Sphenodon_punctatus
ENSORLG00015009045	smarcad1a	100	71.816	ENSSPAG00000001970	smarcad1a	100	72.439	Stegastes_partitus
ENSORLG00015009045	smarcad1a	92	61.272	ENSSSCG00000009193	SMARCAD1	93	64.910	Sus_scrofa
ENSORLG00015009045	smarcad1a	74	61.711	ENSTGUG00000003127	SMARCAD1	93	64.910	Taeniopygia_guttata
ENSORLG00015009045	smarcad1a	88	79.224	ENSTNIG00000017585	smarcad1a	96	81.062	Tetraodon_nigroviridis
ENSORLG00015009045	smarcad1a	76	69.048	ENSTBEG00000002789	SMARCAD1	84	69.048	Tupaia_belangeri
ENSORLG00015009045	smarcad1a	84	61.188	ENSTTRG00000000226	SMARCAD1	81	64.812	Tursiops_truncatus
ENSORLG00015009045	smarcad1a	92	61.188	ENSUAMG00000022262	SMARCAD1	93	64.910	Ursus_americanus
ENSORLG00015009045	smarcad1a	92	61.188	ENSUMAG00000004549	SMARCAD1	93	64.910	Ursus_maritimus
ENSORLG00015009045	smarcad1a	91	62.079	ENSVVUG00000007271	SMARCAD1	93	65.211	Vulpes_vulpes
ENSORLG00015009045	smarcad1a	90	54.047	ENSXETG00000019214	smarcad1	96	58.123	Xenopus_tropicalis
ENSORLG00015009045	smarcad1a	82	78.849	ENSXCOG00000005232	smarcad1a	89	79.765	Xiphophorus_couchianus
ENSORLG00015009045	smarcad1a	100	67.029	ENSXMAG00000015350	smarcad1a	100	67.210	Xiphophorus_maculatus