EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSORLG00015009200 (Gene tree)
Gene ID
-
Gene Symbol
rbfox3b
Alias
-
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Oryzias_latipes_hsok
Status
putative
Strand
Minus strand
Length
356754 bases
Position
chr8:1336554-1693307
Accession
101159826
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSORLP00015008390Fox-1_CPF12414.84.9e-4311
ENSORLP00015008418Fox-1_CPF12414.85.5e-4311
ENSORLP00015027159Fox-1_CPF12414.85.7e-4311
ENSORLP00015027137Fox-1_CPF12414.85.8e-4311
ENSORLP00015027182Fox-1_CPF12414.86.2e-4311
ENSORLP00015008372Fox-1_CPF12414.86.9e-4311
ENSORLP00015008297Fox-1_CPF12414.89.3e-4311
ENSORLP00015027171Fox-1_CPF12414.81e-4211
ENSORLP00015008258Fox-1_CPF12414.88.5e-2212
ENSORLP00015008258Fox-1_CPF12414.88.5e-2222
ENSORLP00015008418RRM_1PF00076.221.7e-1811
ENSORLP00015008297RRM_1PF00076.221.7e-1811
ENSORLP00015008372RRM_1PF00076.221.8e-1811
ENSORLP00015027171RRM_1PF00076.221.8e-1811
ENSORLP00015027137RRM_1PF00076.221.9e-1811
ENSORLP00015008390RRM_1PF00076.222.6e-0811
ENSORLP00015008258RRM_1PF00076.220.000111
ENSORLP00015027159RRM_1PF00076.220.0001211
ENSORLP00015027182RRM_1PF00076.220.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSORLT00015001016-5519XM_023957269ENSORLP00015027171382 (aa)XP_023813037-
ENSORLT00015001109-1873-ENSORLP00015027137398 (aa)--
ENSORLT00015000993-5873-ENSORLP00015027182298 (aa)--
ENSORLT00015000956-6201-ENSORLP00015008372384 (aa)--
ENSORLT00015001140-789-ENSORLP00015008258262 (aa)--
ENSORLT00015001049-1111-ENSORLP00015027159283 (aa)--
ENSORLT00015001066-1104-ENSORLP00015008297367 (aa)--
ENSORLT00015000870-5715-ENSORLP00015008418367 (aa)--
ENSORLT00015000925-5661-ENSORLP00015008390349 (aa)--
Gene Model
Click here to download ENSORLG00015009200's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009200's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSORLG00015009200rbfox3b7850.172ENSORLG00015000797-8553.009
ENSORLG00015009200rbfox3b5867.181ENSORLG00015007027rbfox29650.600
ENSORLG00015009200rbfox3b6071.739ENSORLG00015013464rbfox1l8758.357
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSORLG00015009200rbfox3b8593.103ENSG00000167281RBFOX39989.231Homo_sapiens
ENSORLG00015009200rbfox3b10098.910ENSAPOG00000021630rbfox3b10098.356Acanthochromis_polyacanthus
ENSORLG00015009200rbfox3b9969.648ENSAPOG00000015658-9169.919Acanthochromis_polyacanthus
ENSORLG00015009200rbfox3b9867.442ENSAMEG00000014170RBFOX39969.951Ailuropoda_melanoleuca
ENSORLG00015009200rbfox3b10084.385ENSACIG00000010817rbfox3b9994.551Amphilophus_citrinellus
ENSORLG00015009200rbfox3b9460.317ENSACIG00000003768-9070.552Amphilophus_citrinellus
ENSORLG00015009200rbfox3b9979.348ENSAOCG00000010786-9880.163Amphiprion_ocellaris
ENSORLG00015009200rbfox3b10098.910ENSAOCG00000012358rbfox3b10098.910Amphiprion_ocellaris
ENSORLG00015009200rbfox3b9273.333ENSAPEG00000015891-8974.167Amphiprion_percula
ENSORLG00015009200rbfox3b9989.071ENSAPEG00000019081rbfox3b9988.525Amphiprion_percula
ENSORLG00015009200rbfox3b9979.592ENSATEG00000019945rbfox3b9988.889Anabas_testudineus
ENSORLG00015009200rbfox3b9570.395ENSATEG00000023101-9780.063Anabas_testudineus
ENSORLG00015009200rbfox3b9779.944ENSACAG00000016093RBFOX39981.894Anolis_carolinensis
ENSORLG00015009200rbfox3b8593.333ENSANAG00000023457RBFOX310081.905Aotus_nancymaae
ENSORLG00015009200rbfox3b9981.471ENSACLG00000025552-10082.289Astatotilapia_calliptera
ENSORLG00015009200rbfox3b10098.370ENSACLG00000020011rbfox3b10098.083Astatotilapia_calliptera
ENSORLG00015009200rbfox3b10083.024ENSAMXG00000037246rbfox3a10084.677Astyanax_mexicanus
ENSORLG00015009200rbfox3b9686.158ENSAMXG00000042841rbfox3b10086.158Astyanax_mexicanus
ENSORLG00015009200rbfox3b8593.103ENSBTAG00000006280RBFOX310069.184Bos_taurus
ENSORLG00015009200rbfox3b8593.333ENSCJAG00000009563RBFOX310071.468Callithrix_jacchus
ENSORLG00015009200rbfox3b6683.884ENSCAFG00000005547RBFOX310079.433Canis_familiaris
ENSORLG00015009200rbfox3b8593.333ENSCAFG00020008126RBFOX310069.643Canis_lupus_dingo
ENSORLG00015009200rbfox3b8593.333ENSCHIG00000009124RBFOX310069.388Capra_hircus
ENSORLG00015009200rbfox3b8593.103ENSTSYG00000029617RBFOX310071.823Carlito_syrichta
ENSORLG00015009200rbfox3b9178.000ENSCPOG00000021703RBFOX310070.685Cavia_porcellus
ENSORLG00015009200rbfox3b8593.333ENSCCAG00000028450RBFOX310081.905Cebus_capucinus
ENSORLG00015009200rbfox3b8492.593ENSCATG00000018349RBFOX310082.222Cercocebus_atys
ENSORLG00015009200rbfox3b9181.250ENSCLAG00000006449RBFOX310071.074Chinchilla_lanigera
ENSORLG00015009200rbfox3b9469.333ENSCSAG00000002355RBFOX310082.222Chlorocebus_sabaeus
ENSORLG00015009200rbfox3b10074.242ENSCPBG00000010904RBFOX310083.387Chrysemys_picta_bellii
ENSORLG00015009200rbfox3b8593.333ENSCANG00000043120RBFOX310082.222Colobus_angolensis_palliatus
ENSORLG00015009200rbfox3b8586.207ENSCGRG00001019476Rbfox310070.799Cricetulus_griseus_chok1gshd
ENSORLG00015009200rbfox3b8586.207ENSCGRG00000003268Rbfox310070.799Cricetulus_griseus_crigri
ENSORLG00015009200rbfox3b9977.778ENSCSEG00000020606RBFOX310077.778Cynoglossus_semilaevis
ENSORLG00015009200rbfox3b9979.620ENSCSEG00000015567RBFOX39880.435Cynoglossus_semilaevis
ENSORLG00015009200rbfox3b10098.910ENSCVAG00000006882rbfox3b10098.910Cyprinodon_variegatus
ENSORLG00015009200rbfox3b10083.289ENSDARG00000010083rbfox3a10085.714Danio_rerio
ENSORLG00015009200rbfox3b9981.915ENSDARG00000074310rbfox3b9692.670Danio_rerio
ENSORLG00015009200rbfox3b6493.103ENSDNOG00000039391RBFOX38188.333Dasypus_novemcinctus
ENSORLG00015009200rbfox3b9186.957ENSDORG00000005352Rbfox37786.957Dipodomys_ordii
ENSORLG00015009200rbfox3b8354.086ENSEBUG00000013559RBFOX38854.019Eptatretus_burgeri
ENSORLG00015009200rbfox3b9664.151ENSEBUG00000002129RBFOX39967.297Eptatretus_burgeri
ENSORLG00015009200rbfox3b9469.868ENSEASG00005005059RBFOX310082.019Equus_asinus_asinus
ENSORLG00015009200rbfox3b9569.079ENSECAG00000023811RBFOX310081.703Equus_caballus
ENSORLG00015009200rbfox3b8276.056ENSEEUG00000013974RBFOX37688.000Erinaceus_europaeus
ENSORLG00015009200rbfox3b5264.921ENSELUG00000009807-6455.357Esox_lucius
ENSORLG00015009200rbfox3b10095.095ENSELUG00000017963rbfox3b10095.095Esox_lucius
ENSORLG00015009200rbfox3b9779.167ENSFCAG00000002555RBFOX310081.587Felis_catus
ENSORLG00015009200rbfox3b9067.582ENSFALG00000012288RBFOX39961.758Ficedula_albicollis
ENSORLG00015009200rbfox3b9178.000ENSFDAG00000007489RBFOX310065.479Fukomys_damarensis
ENSORLG00015009200rbfox3b9998.932ENSFHEG00000008550rbfox3b10098.932Fundulus_heteroclitus
ENSORLG00015009200rbfox3b9889.796ENSGMOG00000019304-10065.473Gadus_morhua
ENSORLG00015009200rbfox3b9781.564ENSGALG00000032889RBFOX39983.520Gallus_gallus
ENSORLG00015009200rbfox3b10092.098ENSGAFG00000005025rbfox3b10092.098Gambusia_affinis
ENSORLG00015009200rbfox3b9284.314ENSGACG00000002138-10069.466Gasterosteus_aculeatus
ENSORLG00015009200rbfox3b9783.193ENSGAGG00000020025RBFOX310083.387Gopherus_agassizii
ENSORLG00015009200rbfox3b8593.333ENSGGOG00000012546RBFOX310082.222Gorilla_gorilla
ENSORLG00015009200rbfox3b10098.638ENSHBUG00000018099rbfox3b10098.638Haplochromis_burtoni
ENSORLG00015009200rbfox3b9972.611ENSHBUG00000023098-9979.063Haplochromis_burtoni
ENSORLG00015009200rbfox3b9175.897ENSHGLG00000008679RBFOX310069.755Heterocephalus_glaber_female
ENSORLG00015009200rbfox3b9271.429ENSHGLG00100014739RBFOX310065.239Heterocephalus_glaber_male
ENSORLG00015009200rbfox3b10069.625ENSHCOG00000001863RBFOX39374.603Hippocampus_comes
ENSORLG00015009200rbfox3b9879.778ENSHCOG00000007444RBFOX39381.370Hippocampus_comes
ENSORLG00015009200rbfox3b10081.698ENSIPUG00000012010rbfox3a10083.827Ictalurus_punctatus
ENSORLG00015009200rbfox3b9963.768ENSIPUG00000021966rbfox3b9885.227Ictalurus_punctatus
ENSORLG00015009200rbfox3b9459.341ENSSTOG00000026817RBFOX310066.144Ictidomys_tridecemlineatus
ENSORLG00015009200rbfox3b8593.103ENSJJAG00000014167Rbfox310071.271Jaculus_jaculus
ENSORLG00015009200rbfox3b10098.910ENSKMAG00000006726rbfox3b10098.910Kryptolebias_marmoratus
ENSORLG00015009200rbfox3b9998.356ENSLBEG00000004030rbfox3b10098.356Labrus_bergylta
ENSORLG00015009200rbfox3b9985.559ENSLBEG00000022508-10085.559Labrus_bergylta
ENSORLG00015009200rbfox3b5062.703ENSLACG00000000021-9564.865Latimeria_chalumnae
ENSORLG00015009200rbfox3b9862.535ENSLACG00000018409-10066.667Latimeria_chalumnae
ENSORLG00015009200rbfox3b10078.916ENSLOCG00000012267rbfox3a9889.877Lepisosteus_oculatus
ENSORLG00015009200rbfox3b8687.500ENSLAFG00000016623RBFOX310068.878Loxodonta_africana
ENSORLG00015009200rbfox3b8593.103ENSMFAG00000002247RBFOX310071.745Macaca_fascicularis
ENSORLG00015009200rbfox3b8593.103ENSMMUG00000023028RBFOX310082.222Macaca_mulatta
ENSORLG00015009200rbfox3b8488.889ENSMNEG00000041147RBFOX310081.905Macaca_nemestrina
ENSORLG00015009200rbfox3b8492.593ENSMLEG00000025686RBFOX310082.222Mandrillus_leucophaeus
ENSORLG00015009200rbfox3b9870.769ENSMAMG00000020600-9975.068Mastacembelus_armatus
ENSORLG00015009200rbfox3b10077.741ENSMAMG00000019810rbfox3b9988.462Mastacembelus_armatus
ENSORLG00015009200rbfox3b8956.757ENSMZEG00005003055-8162.500Maylandia_zebra
ENSORLG00015009200rbfox3b10098.638ENSMZEG00005000781rbfox3b10098.082Maylandia_zebra
ENSORLG00015009200rbfox3b6080.000ENSMGAG00000005600RBFOX38380.455Meleagris_gallopavo
ENSORLG00015009200rbfox3b9177.083ENSMAUG00000013543Rbfox310070.718Mesocricetus_auratus
ENSORLG00015009200rbfox3b9193.333ENSMICG00000014898RBFOX310081.847Microcebus_murinus
ENSORLG00015009200rbfox3b8586.207ENSMOCG00000015373Rbfox310070.166Microtus_ochrogaster
ENSORLG00015009200rbfox3b10096.748ENSMMOG00000020193rbfox3b10096.748Mola_mola
ENSORLG00015009200rbfox3b9779.387ENSMODG00000002089RBFOX39981.337Monodelphis_domestica
ENSORLG00015009200rbfox3b9983.106ENSMALG00000018270-10083.924Monopterus_albus
ENSORLG00015009200rbfox3b10097.275ENSMALG00000020407rbfox3b10097.275Monopterus_albus
ENSORLG00015009200rbfox3b8586.207MGP_CAROLIEiJ_G0017487Rbfox39689.209Mus_caroli
ENSORLG00015009200rbfox3b9179.167ENSMUSG00000025576Rbfox39689.209Mus_musculus
ENSORLG00015009200rbfox3b8589.655MGP_PahariEiJ_G0018614Rbfox39689.928Mus_pahari
ENSORLG00015009200rbfox3b8589.655MGP_SPRETEiJ_G0018331Rbfox39689.209Mus_spretus
ENSORLG00015009200rbfox3b9863.636ENSMPUG00000012319RBFOX39971.285Mustela_putorius_furo
ENSORLG00015009200rbfox3b8589.655ENSNGAG00000018006Rbfox310071.350Nannospalax_galili
ENSORLG00015009200rbfox3b10068.013ENSNBRG00000022885-9175.904Neolamprologus_brichardi
ENSORLG00015009200rbfox3b10097.548ENSNBRG00000010102rbfox3b10097.548Neolamprologus_brichardi
ENSORLG00015009200rbfox3b9949.488ENSNLEG00000000153-9655.556Nomascus_leucogenys
ENSORLG00015009200rbfox3b9185.106ENSMEUG00000004218-7985.106Notamacropus_eugenii
ENSORLG00015009200rbfox3b7380.000ENSOPRG00000016279-7181.667Ochotona_princeps
ENSORLG00015009200rbfox3b9181.250ENSODEG00000009433RBFOX310081.646Octodon_degus
ENSORLG00015009200rbfox3b10099.183ENSONIG00000009549rbfox3b10099.183Oreochromis_niloticus
ENSORLG00015009200rbfox3b9972.930ENSONIG00000007282-9980.531Oreochromis_niloticus
ENSORLG00015009200rbfox3b6086.207ENSOCUG00000014217RBFOX38260.738Oryctolagus_cuniculus
ENSORLG00015009200rbfox3b10099.738ENSORLG00000000905rbfox3b7999.728Oryzias_latipes
ENSORLG00015009200rbfox3b10099.740ENSORLG00020018030rbfox3b10099.740Oryzias_latipes_hni
ENSORLG00015009200rbfox3b8699.088ENSOMEG00000014677rbfox3b8699.088Oryzias_melastigma
ENSORLG00015009200rbfox3b9869.753ENSOGAG00000029595RBFOX39772.632Otolemur_garnettii
ENSORLG00015009200rbfox3b9750.862ENSOARG00000002908RBFOX39956.404Ovis_aries
ENSORLG00015009200rbfox3b7476.923ENSPPAG00000025383RBFOX39981.250Pan_paniscus
ENSORLG00015009200rbfox3b8586.207ENSPPRG00000007819RBFOX310072.113Panthera_pardus
ENSORLG00015009200rbfox3b8593.333ENSPTRG00000009727RBFOX310082.222Pan_troglodytes
ENSORLG00015009200rbfox3b8492.593ENSPANG00000019837RBFOX310082.222Papio_anubis
ENSORLG00015009200rbfox3b9968.440ENSPKIG00000022633-9669.638Paramormyrops_kingsleyae
ENSORLG00015009200rbfox3b10087.968ENSPKIG00000010299rbfox3a9988.150Paramormyrops_kingsleyae
ENSORLG00015009200rbfox3b8791.049ENSPMGG00000008000rbfox3b10091.975Periophthalmus_magnuspinnatus
ENSORLG00015009200rbfox3b8586.207ENSPEMG00000010500Rbfox310070.718Peromyscus_maniculatus_bairdii
ENSORLG00015009200rbfox3b5075.132ENSPMAG00000008689rbfox3b9977.941Petromyzon_marinus
ENSORLG00015009200rbfox3b9285.417ENSPCIG00000005766RBFOX310080.565Phascolarctos_cinereus
ENSORLG00015009200rbfox3b10098.910ENSPFOG00000018294rbfox3b9698.910Poecilia_formosa
ENSORLG00015009200rbfox3b6594.142ENSPLAG00000000481rbfox3b7993.750Poecilia_latipinna
ENSORLG00015009200rbfox3b9998.577ENSPMEG00000022997rbfox3b10098.577Poecilia_mexicana
ENSORLG00015009200rbfox3b10098.913ENSPREG00000012886rbfox3b9998.913Poecilia_reticulata
ENSORLG00015009200rbfox3b8966.949ENSPPYG00000008704RBFOX39967.606Pongo_abelii
ENSORLG00015009200rbfox3b8586.207ENSPCAG00000001401RBFOX310065.097Procavia_capensis
ENSORLG00015009200rbfox3b9193.333ENSPCOG00000012689RBFOX310070.914Propithecus_coquereli
ENSORLG00015009200rbfox3b8586.207ENSPVAG00000015243RBFOX310063.536Pteropus_vampyrus
ENSORLG00015009200rbfox3b9976.503ENSPNYG00000009079-9676.630Pundamilia_nyererei
ENSORLG00015009200rbfox3b9985.598ENSPNYG00000010414rbfox3b9985.598Pundamilia_nyererei
ENSORLG00015009200rbfox3b10083.289ENSPNAG00000002889rbfox3a10085.411Pygocentrus_nattereri
ENSORLG00015009200rbfox3b9977.660ENSPNAG00000018173rbfox3b9178.439Pygocentrus_nattereri
ENSORLG00015009200rbfox3b8684.375ENSRNOG00000003386Rbfox310081.329Rattus_norvegicus
ENSORLG00015009200rbfox3b8492.593ENSRBIG00000040449RBFOX39981.111Rhinopithecus_bieti
ENSORLG00015009200rbfox3b8492.593ENSRROG00000000766RBFOX310082.222Rhinopithecus_roxellana
ENSORLG00015009200rbfox3b8593.103ENSSBOG00000031591RBFOX310081.905Saimiri_boliviensis_boliviensis
ENSORLG00015009200rbfox3b9479.104ENSSHAG00000016076RBFOX310080.565Sarcophilus_harrisii
ENSORLG00015009200rbfox3b9973.267ENSSFOG00015004716RBFOX310073.267Scleropages_formosus
ENSORLG00015009200rbfox3b10087.375ENSSFOG00015023260rbfox3a10089.701Scleropages_formosus
ENSORLG00015009200rbfox3b10097.917ENSSMAG00000012618rbfox3b8797.917Scophthalmus_maximus
ENSORLG00015009200rbfox3b10082.000ENSSMAG00000019052-10083.758Scophthalmus_maximus
ENSORLG00015009200rbfox3b9976.359ENSSDUG00000015801-9877.174Seriola_dumerili
ENSORLG00015009200rbfox3b9998.932ENSSDUG00000023183rbfox3b10098.932Seriola_dumerili
ENSORLG00015009200rbfox3b9979.620ENSSLDG00000016098-9880.435Seriola_lalandi_dorsalis
ENSORLG00015009200rbfox3b10099.183ENSSLDG00000000149rbfox3b10099.183Seriola_lalandi_dorsalis
ENSORLG00015009200rbfox3b9881.695ENSSPUG00000011733RBFOX39983.439Sphenodon_punctatus
ENSORLG00015009200rbfox3b9989.617ENSSPAG00000017571rbfox3b9989.617Stegastes_partitus
ENSORLG00015009200rbfox3b8470.039ENSSPAG00000004898-8577.700Stegastes_partitus
ENSORLG00015009200rbfox3b7587.500ENSSSCG00000039498RBFOX310068.768Sus_scrofa
ENSORLG00015009200rbfox3b9979.193ENSTRUG00000004894rbfox3b9787.465Takifugu_rubripes
ENSORLG00015009200rbfox3b9978.551ENSTNIG00000011278rbfox3b9979.369Tetraodon_nigroviridis
ENSORLG00015009200rbfox3b5558.974ENSTBEG00000004296-8475.000Tupaia_belangeri
ENSORLG00015009200rbfox3b8693.103ENSTTRG00000003676RBFOX310066.482Tursiops_truncatus
ENSORLG00015009200rbfox3b9469.667ENSUAMG00000004668RBFOX310082.540Ursus_americanus
ENSORLG00015009200rbfox3b8593.103ENSVVUG00000017864RBFOX310082.222Vulpes_vulpes
ENSORLG00015009200rbfox3b9957.440ENSXETG00000020236rbfox39860.644Xenopus_tropicalis
ENSORLG00015009200rbfox3b9897.507ENSXCOG00000018262rbfox3b10097.507Xiphophorus_couchianus
ENSORLG00015009200rbfox3b10099.183ENSXMAG00000012939rbfox3b10099.183Xiphophorus_maculatus

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