EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015009206 (Gene tree)
Gene ID: -
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 2549 bases
Position: chr22:11916423-11918971
Accession: 101173104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015027240	PseudoU_synth_2	PF00849.22	1.5e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015000848	-	1632	XM_004082271	ENSORLP00015027240	543 (aa)	XP_004082319	-

Gene Model

Click here to download ENSORLG00015009206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009206	rpusd2	82	58.681	ENSG00000166133	RPUSD2	81	58.681	Homo_sapiens
ENSORLG00015009206	rpusd2	99	66.202	ENSAPOG00000000817	rpusd2	99	66.899	Acanthochromis_polyacanthus
ENSORLG00015009206	rpusd2	82	58.862	ENSAMEG00000016996	RPUSD2	82	58.862	Ailuropoda_melanoleuca
ENSORLG00015009206	rpusd2	88	75.625	ENSACIG00000024029	rpusd2	96	75.625	Amphilophus_citrinellus
ENSORLG00015009206	rpusd2	99	66.143	ENSAOCG00000015237	rpusd2	99	66.841	Amphiprion_ocellaris
ENSORLG00015009206	rpusd2	99	65.794	ENSAPEG00000021763	rpusd2	99	66.492	Amphiprion_percula
ENSORLG00015009206	rpusd2	99	66.387	ENSATEG00000015242	rpusd2	99	66.387	Anabas_testudineus
ENSORLG00015009206	rpusd2	77	60.890	ENSAPLG00000004723	RPUSD2	100	60.890	Anas_platyrhynchos
ENSORLG00015009206	rpusd2	80	61.074	ENSACAG00000013893	RPUSD2	95	59.442	Anolis_carolinensis
ENSORLG00015009206	rpusd2	82	59.780	ENSANAG00000009691	RPUSD2	82	59.780	Aotus_nancymaae
ENSORLG00015009206	rpusd2	99	67.882	ENSACLG00000019531	rpusd2	99	67.882	Astatotilapia_calliptera
ENSORLG00015009206	rpusd2	86	64.423	ENSAMXG00000013376	rpusd2	86	64.615	Astyanax_mexicanus
ENSORLG00015009206	rpusd2	82	59.692	ENSBTAG00000003193	RPUSD2	81	59.692	Bos_taurus
ENSORLG00015009206	rpusd2	73	35.013	WBGene00019498	K07E8.7	97	35.013	Caenorhabditis_elegans
ENSORLG00015009206	rpusd2	82	58.681	ENSCJAG00000020841	RPUSD2	82	58.681	Callithrix_jacchus
ENSORLG00015009206	rpusd2	89	56.225	ENSCAFG00000009165	RPUSD2	88	56.225	Canis_familiaris
ENSORLG00015009206	rpusd2	89	56.024	ENSCAFG00020005849	RPUSD2	88	56.024	Canis_lupus_dingo
ENSORLG00015009206	rpusd2	82	59.780	ENSCHIG00000006152	RPUSD2	97	52.190	Capra_hircus
ENSORLG00015009206	rpusd2	90	55.040	ENSTSYG00000012844	RPUSD2	87	55.040	Carlito_syrichta
ENSORLG00015009206	rpusd2	90	56.426	ENSCPOG00000013201	RPUSD2	87	56.426	Cavia_porcellus
ENSORLG00015009206	rpusd2	82	59.341	ENSCCAG00000024378	RPUSD2	82	59.341	Cebus_capucinus
ENSORLG00015009206	rpusd2	90	56.137	ENSCATG00000043734	RPUSD2	89	56.137	Cercocebus_atys
ENSORLG00015009206	rpusd2	82	59.607	ENSCLAG00000011862	RPUSD2	81	59.607	Chinchilla_lanigera
ENSORLG00015009206	rpusd2	82	59.823	ENSCSAG00000007538	RPUSD2	87	59.823	Chlorocebus_sabaeus
ENSORLG00015009206	rpusd2	62	55.587	ENSCHOG00000004834	RPUSD2	63	55.874	Choloepus_hoffmanni
ENSORLG00015009206	rpusd2	84	56.911	ENSCPBG00000013419	RPUSD2	92	56.911	Chrysemys_picta_bellii
ENSORLG00015009206	rpusd2	90	56.364	ENSCANG00000003659	RPUSD2	89	56.364	Colobus_angolensis_palliatus
ENSORLG00015009206	rpusd2	85	56.379	ENSCGRG00001009839	Rpusd2	83	56.379	Cricetulus_griseus_chok1gshd
ENSORLG00015009206	rpusd2	85	56.379	ENSCGRG00000012348	Rpusd2	85	56.379	Cricetulus_griseus_crigri
ENSORLG00015009206	rpusd2	88	67.470	ENSCSEG00000001953	rpusd2	85	67.470	Cynoglossus_semilaevis
ENSORLG00015009206	rpusd2	94	69.663	ENSCVAG00000010848	rpusd2	94	69.663	Cyprinodon_variegatus
ENSORLG00015009206	rpusd2	86	67.683	ENSDARG00000060992	rpusd2	83	67.480	Danio_rerio
ENSORLG00015009206	rpusd2	82	57.768	ENSDNOG00000047745	RPUSD2	82	57.768	Dasypus_novemcinctus
ENSORLG00015009206	rpusd2	79	58.945	ENSDORG00000009092	Rpusd2	99	58.945	Dipodomys_ordii
ENSORLG00015009206	rpusd2	98	40.592	FBgn0051719	RluA-1	77	40.592	Drosophila_melanogaster
ENSORLG00015009206	rpusd2	88	44.376	FBgn0032256	RluA-2	87	44.376	Drosophila_melanogaster
ENSORLG00015009206	rpusd2	83	59.071	ENSETEG00000008581	RPUSD2	84	59.071	Echinops_telfairi
ENSORLG00015009206	rpusd2	76	35.011	ENSEBUG00000012149	rpusd2	84	35.011	Eptatretus_burgeri
ENSORLG00015009206	rpusd2	89	56.823	ENSEASG00005016463	RPUSD2	84	56.823	Equus_asinus_asinus
ENSORLG00015009206	rpusd2	89	56.823	ENSECAG00000024178	RPUSD2	84	56.823	Equus_caballus
ENSORLG00015009206	rpusd2	84	51.293	ENSEEUG00000005132	RPUSD2	87	51.293	Erinaceus_europaeus
ENSORLG00015009206	rpusd2	90	66.798	ENSELUG00000016786	rpusd2	92	66.798	Esox_lucius
ENSORLG00015009206	rpusd2	90	56.200	ENSFCAG00000040796	RPUSD2	86	56.200	Felis_catus
ENSORLG00015009206	rpusd2	78	60.000	ENSFALG00000001122	RPUSD2	97	60.449	Ficedula_albicollis
ENSORLG00015009206	rpusd2	82	58.734	ENSFDAG00000003070	RPUSD2	87	58.734	Fukomys_damarensis
ENSORLG00015009206	rpusd2	85	73.431	ENSFHEG00000007518	rpusd2	86	73.431	Fundulus_heteroclitus
ENSORLG00015009206	rpusd2	80	69.845	ENSGMOG00000011014	rpusd2	98	68.737	Gadus_morhua
ENSORLG00015009206	rpusd2	85	58.178	ENSGALG00000041216	RPUSD2	97	58.178	Gallus_gallus
ENSORLG00015009206	rpusd2	99	67.210	ENSGAFG00000003390	rpusd2	97	67.210	Gambusia_affinis
ENSORLG00015009206	rpusd2	85	72.561	ENSGACG00000008656	rpusd2	94	72.561	Gasterosteus_aculeatus
ENSORLG00015009206	rpusd2	83	61.404	ENSGAGG00000013098	RPUSD2	88	61.404	Gopherus_agassizii
ENSORLG00015009206	rpusd2	90	54.910	ENSGGOG00000006684	RPUSD2	89	54.910	Gorilla_gorilla
ENSORLG00015009206	rpusd2	99	67.882	ENSHBUG00000023777	rpusd2	99	67.882	Haplochromis_burtoni
ENSORLG00015009206	rpusd2	82	59.152	ENSHGLG00000012765	RPUSD2	81	59.152	Heterocephalus_glaber_female
ENSORLG00015009206	rpusd2	82	59.152	ENSHGLG00100006653	RPUSD2	81	59.152	Heterocephalus_glaber_male
ENSORLG00015009206	rpusd2	91	70.192	ENSHCOG00000015587	rpusd2	87	70.192	Hippocampus_comes
ENSORLG00015009206	rpusd2	87	68.410	ENSIPUG00000021006	rpusd2	84	68.410	Ictalurus_punctatus
ENSORLG00015009206	rpusd2	90	55.711	ENSSTOG00000025619	RPUSD2	87	55.711	Ictidomys_tridecemlineatus
ENSORLG00015009206	rpusd2	80	60.412	ENSJJAG00000023160	Rpusd2	86	59.219	Jaculus_jaculus
ENSORLG00015009206	rpusd2	99	66.146	ENSKMAG00000006618	rpusd2	98	66.321	Kryptolebias_marmoratus
ENSORLG00015009206	rpusd2	94	67.778	ENSLBEG00000021571	rpusd2	94	68.382	Labrus_bergylta
ENSORLG00015009206	rpusd2	79	58.681	ENSLACG00000017338	RPUSD2	99	58.681	Latimeria_chalumnae
ENSORLG00015009206	rpusd2	89	66.939	ENSLOCG00000014755	rpusd2	99	66.939	Lepisosteus_oculatus
ENSORLG00015009206	rpusd2	82	59.471	ENSLAFG00000015588	RPUSD2	84	59.471	Loxodonta_africana
ENSORLG00015009206	rpusd2	90	56.539	ENSMFAG00000045062	RPUSD2	89	56.539	Macaca_fascicularis
ENSORLG00015009206	rpusd2	82	59.823	ENSMMUG00000001483	RPUSD2	81	59.823	Macaca_mulatta
ENSORLG00015009206	rpusd2	90	49.801	ENSMNEG00000041429	RPUSD2	89	49.801	Macaca_nemestrina
ENSORLG00015009206	rpusd2	62	57.849	ENSMLEG00000036551	RPUSD2	80	57.849	Mandrillus_leucophaeus
ENSORLG00015009206	rpusd2	94	65.719	ENSMAMG00000001077	rpusd2	92	66.430	Mastacembelus_armatus
ENSORLG00015009206	rpusd2	91	72.062	ENSMZEG00005006947	rpusd2	99	72.062	Maylandia_zebra
ENSORLG00015009206	rpusd2	84	60.521	ENSMGAG00000003058	RPUSD2	99	60.521	Meleagris_gallopavo
ENSORLG00015009206	rpusd2	86	56.639	ENSMAUG00000020467	Rpusd2	86	56.639	Mesocricetus_auratus
ENSORLG00015009206	rpusd2	86	57.895	ENSMICG00000028637	RPUSD2	85	57.895	Microcebus_murinus
ENSORLG00015009206	rpusd2	84	57.829	ENSMOCG00000020061	Rpusd2	84	57.829	Microtus_ochrogaster
ENSORLG00015009206	rpusd2	99	67.553	ENSMMOG00000012020	rpusd2	99	68.551	Mola_mola
ENSORLG00015009206	rpusd2	82	59.911	ENSMODG00000000300	RPUSD2	82	59.911	Monodelphis_domestica
ENSORLG00015009206	rpusd2	99	62.876	ENSMALG00000010024	rpusd2	99	63.545	Monopterus_albus
ENSORLG00015009206	rpusd2	82	58.940	MGP_CAROLIEiJ_G0024130	Rpusd2	79	58.940	Mus_caroli
ENSORLG00015009206	rpusd2	82	58.901	ENSMUSG00000027324	Rpusd2	80	58.901	Mus_musculus
ENSORLG00015009206	rpusd2	82	59.911	MGP_PahariEiJ_G0025573	Rpusd2	80	59.911	Mus_pahari
ENSORLG00015009206	rpusd2	82	58.901	MGP_SPRETEiJ_G0025046	Rpusd2	80	58.901	Mus_spretus
ENSORLG00015009206	rpusd2	82	59.341	ENSMPUG00000008517	RPUSD2	81	59.341	Mustela_putorius_furo
ENSORLG00015009206	rpusd2	82	60.000	ENSMLUG00000007971	RPUSD2	88	60.000	Myotis_lucifugus
ENSORLG00015009206	rpusd2	88	56.263	ENSNGAG00000014126	Rpusd2	88	56.263	Nannospalax_galili
ENSORLG00015009206	rpusd2	99	68.525	ENSNBRG00000010070	rpusd2	99	68.525	Neolamprologus_brichardi
ENSORLG00015009206	rpusd2	90	55.758	ENSNLEG00000035735	RPUSD2	89	55.758	Nomascus_leucogenys
ENSORLG00015009206	rpusd2	85	58.174	ENSMEUG00000008500	RPUSD2	88	58.174	Notamacropus_eugenii
ENSORLG00015009206	rpusd2	96	52.799	ENSOPRG00000014177	-	96	52.799	Ochotona_princeps
ENSORLG00015009206	rpusd2	82	59.471	ENSODEG00000017193	RPUSD2	82	59.471	Octodon_degus
ENSORLG00015009206	rpusd2	87	75.052	ENSONIG00000020102	rpusd2	95	75.052	Oreochromis_niloticus
ENSORLG00015009206	rpusd2	82	59.692	ENSOCUG00000015745	RPUSD2	79	59.692	Oryctolagus_cuniculus
ENSORLG00015009206	rpusd2	100	97.974	ENSORLG00000015516	rpusd2	100	97.974	Oryzias_latipes
ENSORLG00015009206	rpusd2	100	97.606	ENSORLG00020010533	rpusd2	100	97.606	Oryzias_latipes_hni
ENSORLG00015009206	rpusd2	100	84.432	ENSOMEG00000007355	rpusd2	91	84.432	Oryzias_melastigma
ENSORLG00015009206	rpusd2	84	58.422	ENSOGAG00000004867	RPUSD2	88	58.422	Otolemur_garnettii
ENSORLG00015009206	rpusd2	95	53.184	ENSOARG00000020235	RPUSD2	86	58.386	Ovis_aries
ENSORLG00015009206	rpusd2	90	55.533	ENSPPAG00000032874	RPUSD2	89	55.533	Pan_paniscus
ENSORLG00015009206	rpusd2	83	58.043	ENSPPRG00000010446	RPUSD2	83	58.043	Panthera_pardus
ENSORLG00015009206	rpusd2	83	58.043	ENSPTIG00000013316	RPUSD2	83	58.043	Panthera_tigris_altaica
ENSORLG00015009206	rpusd2	90	55.533	ENSPTRG00000006924	RPUSD2	89	55.533	Pan_troglodytes
ENSORLG00015009206	rpusd2	90	56.338	ENSPANG00000019339	RPUSD2	89	56.338	Papio_anubis
ENSORLG00015009206	rpusd2	86	61.468	ENSPKIG00000023017	rpusd2	82	61.468	Paramormyrops_kingsleyae
ENSORLG00015009206	rpusd2	62	59.322	ENSPSIG00000012680	RPUSD2	99	59.322	Pelodiscus_sinensis
ENSORLG00015009206	rpusd2	92	68.047	ENSPMGG00000018165	rpusd2	91	68.047	Periophthalmus_magnuspinnatus
ENSORLG00015009206	rpusd2	82	59.471	ENSPEMG00000012878	Rpusd2	83	59.471	Peromyscus_maniculatus_bairdii
ENSORLG00015009206	rpusd2	82	59.508	ENSPCIG00000023199	RPUSD2	81	59.508	Phascolarctos_cinereus
ENSORLG00015009206	rpusd2	86	75.687	ENSPFOG00000006829	rpusd2	85	75.687	Poecilia_formosa
ENSORLG00015009206	rpusd2	86	75.687	ENSPLAG00000022914	rpusd2	96	75.687	Poecilia_latipinna
ENSORLG00015009206	rpusd2	86	75.687	ENSPMEG00000009835	rpusd2	96	75.687	Poecilia_mexicana
ENSORLG00015009206	rpusd2	99	68.306	ENSPREG00000016441	rpusd2	94	68.306	Poecilia_reticulata
ENSORLG00015009206	rpusd2	90	55.758	ENSPPYG00000006355	RPUSD2	89	55.758	Pongo_abelii
ENSORLG00015009206	rpusd2	85	56.780	ENSPCOG00000028019	RPUSD2	85	56.780	Propithecus_coquereli
ENSORLG00015009206	rpusd2	80	59.864	ENSPVAG00000001837	RPUSD2	80	59.864	Pteropus_vampyrus
ENSORLG00015009206	rpusd2	86	75.957	ENSPNYG00000021507	rpusd2	93	75.957	Pundamilia_nyererei
ENSORLG00015009206	rpusd2	82	58.811	ENSRNOG00000010528	LOC100911166	80	58.811	Rattus_norvegicus
ENSORLG00015009206	rpusd2	82	58.811	ENSRNOG00000046797	Rpusd2	80	58.811	Rattus_norvegicus
ENSORLG00015009206	rpusd2	90	56.338	ENSRBIG00000030813	RPUSD2	89	56.338	Rhinopithecus_bieti
ENSORLG00015009206	rpusd2	82	59.603	ENSRROG00000026664	RPUSD2	81	59.603	Rhinopithecus_roxellana
ENSORLG00015009206	rpusd2	53	45.238	YDL036C	-	60	46.763	Saccharomyces_cerevisiae
ENSORLG00015009206	rpusd2	84	58.442	ENSSBOG00000035031	RPUSD2	83	58.442	Saimiri_boliviensis_boliviensis
ENSORLG00015009206	rpusd2	63	57.018	ENSSHAG00000015108	RPUSD2	91	57.018	Sarcophilus_harrisii
ENSORLG00015009206	rpusd2	80	60.311	ENSSFOG00015019057	rpusd2	82	57.664	Scleropages_formosus
ENSORLG00015009206	rpusd2	99	64.983	ENSSMAG00000000903	rpusd2	98	70.802	Scophthalmus_maximus
ENSORLG00015009206	rpusd2	99	63.306	ENSSDUG00000019139	rpusd2	99	63.967	Seriola_dumerili
ENSORLG00015009206	rpusd2	99	63.471	ENSSLDG00000005938	rpusd2	99	64.132	Seriola_lalandi_dorsalis
ENSORLG00015009206	rpusd2	89	57.317	ENSSARG00000002792	RPUSD2	88	57.317	Sorex_araneus
ENSORLG00015009206	rpusd2	83	58.887	ENSSPUG00000001206	RPUSD2	91	58.887	Sphenodon_punctatus
ENSORLG00015009206	rpusd2	99	68.126	ENSSPAG00000003578	rpusd2	99	68.126	Stegastes_partitus
ENSORLG00015009206	rpusd2	82	58.940	ENSSSCG00000036700	RPUSD2	81	58.940	Sus_scrofa
ENSORLG00015009206	rpusd2	88	66.987	ENSTRUG00000025880	rpusd2	96	68.164	Takifugu_rubripes
ENSORLG00015009206	rpusd2	89	69.882	ENSTNIG00000017329	rpusd2	99	69.882	Tetraodon_nigroviridis
ENSORLG00015009206	rpusd2	81	52.174	ENSTBEG00000007933	RPUSD2	84	52.174	Tupaia_belangeri
ENSORLG00015009206	rpusd2	80	60.544	ENSTTRG00000010585	RPUSD2	80	60.544	Tursiops_truncatus
ENSORLG00015009206	rpusd2	82	59.300	ENSUAMG00000001470	RPUSD2	87	59.300	Ursus_americanus
ENSORLG00015009206	rpusd2	82	59.300	ENSUMAG00000012487	RPUSD2	72	59.300	Ursus_maritimus
ENSORLG00015009206	rpusd2	82	59.645	ENSVPAG00000003844	RPUSD2	82	59.645	Vicugna_pacos
ENSORLG00015009206	rpusd2	89	56.024	ENSVVUG00000026590	RPUSD2	88	56.024	Vulpes_vulpes
ENSORLG00015009206	rpusd2	82	58.099	ENSXETG00000015973	rpusd2	97	58.099	Xenopus_tropicalis
ENSORLG00015009206	rpusd2	99	66.847	ENSXMAG00000021821	rpusd2	96	75.053	Xiphophorus_maculatus