EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015009410 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: -
Full Name: serine/arginine-rich splicing factor 6a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 6541 bases
Position: chr7:8063757-8070297
Accession: ZDB-GENE-040426-2824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015008597	RRM_1	PF00076.22	2.1e-31	1	2
ENSORLP00015008597	RRM_1	PF00076.22	2.1e-31	2	2
ENSORLP00015008607	RRM_1	PF00076.22	3.8e-06	1	1
ENSORLP00015008617	RRM_1	PF00076.22	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015000560	-	993	-	ENSORLP00015008597	330 (aa)	-	-
ENSORLT00015000519	-	3386	-	ENSORLP00015008617	234 (aa)	-	-
ENSORLT00015000532	-	1883	-	ENSORLP00015008607	234 (aa)	-	-

Gene Model

Click here to download ENSORLG00015009410's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009410's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009410	srsf6a	93	63.473	ENSACIG00000023658	-	56	78.453	Amphilophus_citrinellus
ENSORLG00015009410	srsf6a	57	70.136	ENSACIG00000020091	-	95	69.291	Amphilophus_citrinellus
ENSORLG00015009410	srsf6a	58	48.148	ENSAPEG00000020746	-	65	73.370	Amphiprion_percula
ENSORLG00015009410	srsf6a	65	63.223	ENSELUG00000013506	SRSF6	56	88.889	Esox_lucius
ENSORLG00015009410	srsf6a	95	61.877	ENSFHEG00000023065	srsf6a	55	78.804	Fundulus_heteroclitus
ENSORLG00015009410	srsf6a	94	60.313	ENSGACG00000006084	srsf6a	58	79.213	Gasterosteus_aculeatus
ENSORLG00015009410	srsf6a	58	69.737	ENSHBUG00000006386	-	57	77.095	Haplochromis_burtoni
ENSORLG00015009410	srsf6a	53	98.148	ENSKMAG00000011934	srsf6a	100	74.667	Kryptolebias_marmoratus
ENSORLG00015009410	srsf6a	90	71.429	ENSLBEG00000007356	srsf6a	100	69.638	Labrus_bergylta
ENSORLG00015009410	srsf6a	81	57.068	ENSLACG00000005466	SRSF6	54	77.049	Latimeria_chalumnae
ENSORLG00015009410	srsf6a	92	57.674	ENSMAMG00000017161	srsf6a	75	80.000	Mastacembelus_armatus
ENSORLG00015009410	srsf6a	85	77.333	ENSMALG00000003702	srsf6a	100	77.333	Monopterus_albus
ENSORLG00015009410	srsf6a	100	100.000	ENSORLG00000003530	srsf6a	100	100.000	Oryzias_latipes
ENSORLG00015009410	srsf6a	92	70.181	ENSPKIG00000018463	-	62	90.476	Paramormyrops_kingsleyae
ENSORLG00015009410	srsf6a	95	66.962	ENSPMGG00000014963	srsf6a	56	79.459	Periophthalmus_magnuspinnatus
ENSORLG00015009410	srsf6a	92	94.444	ENSPFOG00000006437	srsf6a	50	76.440	Poecilia_formosa
ENSORLG00015009410	srsf6a	92	66.055	ENSPNYG00000011272	-	85	67.431	Pundamilia_nyererei
ENSORLG00015009410	srsf6a	64	74.000	ENSSFOG00015015169	SRSF6	60	78.804	Scleropages_formosus
ENSORLG00015009410	srsf6a	92	57.209	ENSSPAG00000002362	srsf6a	86	76.923	Stegastes_partitus
ENSORLG00015009410	srsf6a	93	62.798	ENSTNIG00000001692	srsf6a	57	78.075	Tetraodon_nigroviridis