EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015009413 (Gene tree)
Gene ID: -
Gene Symbol: tsen54
Alias: -
Full Name: TSEN54 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 13052 bases
Position: chr8:1124295-1137346
Accession: ZDB-GENE-050522-454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015027367	tRNA_int_end_N2	PF12928.7	2.7e-18	1	1
ENSORLP00015008606	tRNA_int_end_N2	PF12928.7	1.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015000544	-	4212	-	ENSORLP00015027367	488 (aa)	-	-
ENSORLT00015000531	-	468	-	ENSORLP00015008606	155 (aa)	-	-

Gene Model

Click here to download ENSORLG00015009413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009413's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009413	tsen54	97	53.548	ENSG00000182173	TSEN54	100	63.889	Homo_sapiens
ENSORLG00015009413	tsen54	99	66.132	ENSAPOG00000009659	tsen54	99	64.477	Acanthochromis_polyacanthus
ENSORLG00015009413	tsen54	97	42.830	ENSAMEG00000009414	TSEN54	96	44.141	Ailuropoda_melanoleuca
ENSORLG00015009413	tsen54	59	76.923	ENSACIG00000010899	-	52	77.551	Amphilophus_citrinellus
ENSORLG00015009413	tsen54	99	67.735	ENSAOCG00000000152	tsen54	96	67.735	Amphiprion_ocellaris
ENSORLG00015009413	tsen54	99	66.733	ENSAPEG00000018931	tsen54	95	66.934	Amphiprion_percula
ENSORLG00015009413	tsen54	99	60.769	ENSATEG00000019860	tsen54	98	61.154	Anabas_testudineus
ENSORLG00015009413	tsen54	80	60.000	ENSAPLG00000009419	TSEN54	99	43.818	Anas_platyrhynchos
ENSORLG00015009413	tsen54	98	46.784	ENSACAG00000006714	TSEN54	98	46.589	Anolis_carolinensis
ENSORLG00015009413	tsen54	99	46.154	ENSANAG00000024061	TSEN54	98	46.228	Aotus_nancymaae
ENSORLG00015009413	tsen54	99	66.267	ENSACLG00000019800	tsen54	98	66.203	Astatotilapia_calliptera
ENSORLG00015009413	tsen54	98	56.478	ENSAMXG00000006546	tsen54	98	56.574	Astyanax_mexicanus
ENSORLG00015009413	tsen54	98	43.629	ENSBTAG00000000824	TSEN54	97	44.618	Bos_taurus
ENSORLG00015009413	tsen54	99	45.962	ENSCJAG00000014278	TSEN54	98	45.962	Callithrix_jacchus
ENSORLG00015009413	tsen54	98	45.068	ENSCAFG00000004798	TSEN54	97	45.560	Canis_familiaris
ENSORLG00015009413	tsen54	98	45.068	ENSCAFG00020000312	TSEN54	97	45.560	Canis_lupus_dingo
ENSORLG00015009413	tsen54	98	43.676	ENSCHIG00000019908	TSEN54	97	44.930	Capra_hircus
ENSORLG00015009413	tsen54	70	66.055	ENSTSYG00000037439	TSEN54	99	44.150	Carlito_syrichta
ENSORLG00015009413	tsen54	90	58.042	ENSCPOG00000004630	-	87	56.410	Cavia_porcellus
ENSORLG00015009413	tsen54	99	45.385	ENSCCAG00000036624	TSEN54	98	45.648	Cebus_capucinus
ENSORLG00015009413	tsen54	98	45.988	ENSCATG00000042877	TSEN54	98	45.385	Cercocebus_atys
ENSORLG00015009413	tsen54	98	45.117	ENSCLAG00000002924	TSEN54	96	44.970	Chinchilla_lanigera
ENSORLG00015009413	tsen54	99	45.962	ENSCSAG00000004809	TSEN54	98	45.577	Chlorocebus_sabaeus
ENSORLG00015009413	tsen54	98	46.743	ENSCPBG00000028071	TSEN54	98	46.346	Chrysemys_picta_bellii
ENSORLG00015009413	tsen54	96	54.967	ENSCANG00000028053	TSEN54	98	45.455	Colobus_angolensis_palliatus
ENSORLG00015009413	tsen54	98	44.510	ENSCGRG00001020029	Tsen54	97	44.510	Cricetulus_griseus_chok1gshd
ENSORLG00015009413	tsen54	78	54.918	ENSCGRG00000016289	Tsen54	99	42.500	Cricetulus_griseus_crigri
ENSORLG00015009413	tsen54	68	67.925	ENSCSEG00000020586	tsen54	99	52.278	Cynoglossus_semilaevis
ENSORLG00015009413	tsen54	52	82.500	ENSCVAG00000006741	-	65	82.500	Cyprinodon_variegatus
ENSORLG00015009413	tsen54	81	52.750	ENSDARG00000036844	tsen54	99	53.500	Danio_rerio
ENSORLG00015009413	tsen54	99	43.810	ENSDNOG00000018452	TSEN54	98	45.524	Dasypus_novemcinctus
ENSORLG00015009413	tsen54	98	45.276	ENSDORG00000004073	Tsen54	97	45.669	Dipodomys_ordii
ENSORLG00015009413	tsen54	80	43.312	ENSEBUG00000005203	TSEN54	73	43.312	Eptatretus_burgeri
ENSORLG00015009413	tsen54	99	45.873	ENSEASG00005000579	TSEN54	98	45.106	Equus_asinus_asinus
ENSORLG00015009413	tsen54	99	45.298	ENSECAG00000004924	TSEN54	98	45.106	Equus_caballus
ENSORLG00015009413	tsen54	74	62.609	ENSEEUG00000008467	TSEN54	99	42.670	Erinaceus_europaeus
ENSORLG00015009413	tsen54	98	54.685	ENSELUG00000017703	tsen54	90	55.028	Esox_lucius
ENSORLG00015009413	tsen54	98	43.969	ENSFCAG00000023712	TSEN54	97	44.660	Felis_catus
ENSORLG00015009413	tsen54	94	45.082	ENSFALG00000001119	TSEN54	93	43.976	Ficedula_albicollis
ENSORLG00015009413	tsen54	74	63.478	ENSFDAG00000019090	TSEN54	99	44.321	Fukomys_damarensis
ENSORLG00015009413	tsen54	99	70.385	ENSFHEG00000005470	tsen54	98	70.183	Fundulus_heteroclitus
ENSORLG00015009413	tsen54	97	45.397	ENSGMOG00000013146	tsen54	99	46.653	Gadus_morhua
ENSORLG00015009413	tsen54	91	50.355	ENSGALG00000047163	TSEN54	96	42.137	Gallus_gallus
ENSORLG00015009413	tsen54	99	68.916	ENSGAFG00000005111	tsen54	98	68.916	Gambusia_affinis
ENSORLG00015009413	tsen54	98	60.870	ENSGACG00000014987	tsen54	100	60.825	Gasterosteus_aculeatus
ENSORLG00015009413	tsen54	85	60.150	ENSGAGG00000006825	TSEN54	96	46.552	Gopherus_agassizii
ENSORLG00015009413	tsen54	97	45.686	ENSGGOG00000009417	TSEN54	99	45.294	Gorilla_gorilla
ENSORLG00015009413	tsen54	80	75.806	ENSHBUG00000018296	tsen54	89	64.238	Haplochromis_burtoni
ENSORLG00015009413	tsen54	98	46.214	ENSHGLG00000007979	TSEN54	97	46.471	Heterocephalus_glaber_female
ENSORLG00015009413	tsen54	98	45.243	ENSHGLG00100005497	TSEN54	97	45.490	Heterocephalus_glaber_male
ENSORLG00015009413	tsen54	69	71.028	ENSHCOG00000007481	tsen54	99	55.882	Hippocampus_comes
ENSORLG00015009413	tsen54	99	50.909	ENSIPUG00000000590	tsen54	97	50.909	Ictalurus_punctatus
ENSORLG00015009413	tsen54	98	44.882	ENSSTOG00000012883	TSEN54	97	44.752	Ictidomys_tridecemlineatus
ENSORLG00015009413	tsen54	98	44.618	ENSJJAG00000007365	Tsen54	97	44.291	Jaculus_jaculus
ENSORLG00015009413	tsen54	99	63.077	ENSKMAG00000006944	tsen54	98	63.077	Kryptolebias_marmoratus
ENSORLG00015009413	tsen54	99	61.448	ENSLBEG00000004199	tsen54	98	62.231	Labrus_bergylta
ENSORLG00015009413	tsen54	98	40.812	ENSLACG00000009497	TSEN54	99	40.039	Latimeria_chalumnae
ENSORLG00015009413	tsen54	98	54.280	ENSLOCG00000011191	tsen54	97	54.280	Lepisosteus_oculatus
ENSORLG00015009413	tsen54	93	43.802	ENSLAFG00000011655	TSEN54	92	45.473	Loxodonta_africana
ENSORLG00015009413	tsen54	88	57.246	ENSMFAG00000000712	TSEN54	98	45.577	Macaca_fascicularis
ENSORLG00015009413	tsen54	88	57.246	ENSMMUG00000022123	TSEN54	76	58.519	Macaca_mulatta
ENSORLG00015009413	tsen54	88	57.246	ENSMNEG00000029199	TSEN54	98	45.577	Macaca_nemestrina
ENSORLG00015009413	tsen54	74	62.609	ENSMLEG00000044168	TSEN54	88	44.371	Mandrillus_leucophaeus
ENSORLG00015009413	tsen54	99	64.113	ENSMAMG00000019773	tsen54	98	63.800	Mastacembelus_armatus
ENSORLG00015009413	tsen54	99	66.068	ENSMZEG00005000884	tsen54	98	66.004	Maylandia_zebra
ENSORLG00015009413	tsen54	94	42.222	ENSMGAG00000009556	TSEN54	93	42.339	Meleagris_gallopavo
ENSORLG00015009413	tsen54	98	44.970	ENSMAUG00000016838	Tsen54	97	44.685	Mesocricetus_auratus
ENSORLG00015009413	tsen54	98	46.371	ENSMICG00000044012	TSEN54	96	46.586	Microcebus_murinus
ENSORLG00015009413	tsen54	98	45.652	ENSMOCG00000021585	Tsen54	97	45.652	Microtus_ochrogaster
ENSORLG00015009413	tsen54	97	61.066	ENSMMOG00000020189	tsen54	99	61.885	Mola_mola
ENSORLG00015009413	tsen54	98	44.129	ENSMODG00000007438	TSEN54	95	44.129	Monodelphis_domestica
ENSORLG00015009413	tsen54	99	65.882	ENSMALG00000020573	tsen54	98	65.882	Monopterus_albus
ENSORLG00015009413	tsen54	98	44.094	MGP_CAROLIEiJ_G0017417	Tsen54	97	44.094	Mus_caroli
ENSORLG00015009413	tsen54	98	44.773	ENSMUSG00000020781	Tsen54	97	44.773	Mus_musculus
ENSORLG00015009413	tsen54	98	44.773	MGP_PahariEiJ_G0018547	Tsen54	97	44.970	Mus_pahari
ENSORLG00015009413	tsen54	98	44.379	MGP_SPRETEiJ_G0018262	Tsen54	97	44.379	Mus_spretus
ENSORLG00015009413	tsen54	99	43.750	ENSMPUG00000013870	TSEN54	98	44.213	Mustela_putorius_furo
ENSORLG00015009413	tsen54	98	43.548	ENSMLUG00000015298	TSEN54	96	45.565	Myotis_lucifugus
ENSORLG00015009413	tsen54	98	46.245	ENSNGAG00000015673	Tsen54	97	46.245	Nannospalax_galili
ENSORLG00015009413	tsen54	96	53.642	ENSNLEG00000001071	-	99	53.642	Nomascus_leucogenys
ENSORLG00015009413	tsen54	92	40.690	ENSMEUG00000011908	TSEN54	99	40.215	Notamacropus_eugenii
ENSORLG00015009413	tsen54	98	44.088	ENSOPRG00000012513	TSEN54	96	44.088	Ochotona_princeps
ENSORLG00015009413	tsen54	90	54.861	ENSODEG00000010059	-	91	53.797	Octodon_degus
ENSORLG00015009413	tsen54	99	65.810	ENSONIG00000009543	tsen54	98	65.810	Oreochromis_niloticus
ENSORLG00015009413	tsen54	65	53.000	ENSOANG00000030893	-	98	42.236	Ornithorhynchus_anatinus
ENSORLG00015009413	tsen54	98	42.664	ENSOCUG00000009875	TSEN54	97	44.272	Oryctolagus_cuniculus
ENSORLG00015009413	tsen54	100	98.156	ENSORLG00000000852	tsen54	99	98.156	Oryzias_latipes
ENSORLG00015009413	tsen54	100	98.361	ENSORLG00020018221	tsen54	99	98.361	Oryzias_latipes_hni
ENSORLG00015009413	tsen54	99	85.626	ENSOMEG00000014402	tsen54	96	85.626	Oryzias_melastigma
ENSORLG00015009413	tsen54	98	44.291	ENSOGAG00000001442	TSEN54	97	43.898	Otolemur_garnettii
ENSORLG00015009413	tsen54	72	63.964	ENSOARG00000010361	TSEN54	99	41.501	Ovis_aries
ENSORLG00015009413	tsen54	95	43.825	ENSPPAG00000043519	TSEN54	99	44.980	Pan_paniscus
ENSORLG00015009413	tsen54	98	44.358	ENSPPRG00000009162	TSEN54	97	45.049	Panthera_pardus
ENSORLG00015009413	tsen54	72	63.964	ENSPTIG00000019312	TSEN54	96	43.459	Panthera_tigris_altaica
ENSORLG00015009413	tsen54	97	53.548	ENSPTRG00000009646	TSEN54	98	45.298	Pan_troglodytes
ENSORLG00015009413	tsen54	88	57.246	ENSPANG00000020133	TSEN54	98	45.276	Papio_anubis
ENSORLG00015009413	tsen54	99	52.612	ENSPKIG00000023018	tsen54	99	51.825	Paramormyrops_kingsleyae
ENSORLG00015009413	tsen54	66	59.615	ENSPSIG00000012807	TSEN54	99	43.619	Pelodiscus_sinensis
ENSORLG00015009413	tsen54	94	46.482	ENSPMGG00000019578	tsen54	100	46.482	Periophthalmus_magnuspinnatus
ENSORLG00015009413	tsen54	98	44.380	ENSPEMG00000014857	Tsen54	97	44.314	Peromyscus_maniculatus_bairdii
ENSORLG00015009413	tsen54	99	67.951	ENSPFOG00000022740	tsen54	98	67.951	Poecilia_formosa
ENSORLG00015009413	tsen54	99	67.894	ENSPLAG00000014847	tsen54	98	67.894	Poecilia_latipinna
ENSORLG00015009413	tsen54	99	67.689	ENSPMEG00000022876	tsen54	98	67.689	Poecilia_mexicana
ENSORLG00015009413	tsen54	99	67.146	ENSPREG00000013090	tsen54	98	67.280	Poecilia_reticulata
ENSORLG00015009413	tsen54	85	56.716	ENSPPYG00000008629	TSEN54	99	44.662	Pongo_abelii
ENSORLG00015009413	tsen54	93	40.741	ENSPCAG00000002093	TSEN54	96	40.984	Procavia_capensis
ENSORLG00015009413	tsen54	98	45.079	ENSPCOG00000027880	TSEN54	97	45.490	Propithecus_coquereli
ENSORLG00015009413	tsen54	98	44.358	ENSPVAG00000008446	TSEN54	97	44.358	Pteropus_vampyrus
ENSORLG00015009413	tsen54	94	64.609	ENSPNYG00000010217	tsen54	100	64.549	Pundamilia_nyererei
ENSORLG00015009413	tsen54	99	55.039	ENSPNAG00000003770	tsen54	98	55.039	Pygocentrus_nattereri
ENSORLG00015009413	tsen54	98	45.562	ENSRNOG00000004598	Tsen54	97	44.576	Rattus_norvegicus
ENSORLG00015009413	tsen54	96	54.967	ENSRBIG00000043040	TSEN54	98	45.385	Rhinopithecus_bieti
ENSORLG00015009413	tsen54	99	45.769	ENSRROG00000030797	TSEN54	98	45.385	Rhinopithecus_roxellana
ENSORLG00015009413	tsen54	99	43.762	ENSSBOG00000013543	TSEN54	97	43.822	Saimiri_boliviensis_boliviensis
ENSORLG00015009413	tsen54	98	44.253	ENSSHAG00000018127	TSEN54	96	44.402	Sarcophilus_harrisii
ENSORLG00015009413	tsen54	66	67.961	ENSSFOG00015004093	tsen54	99	51.313	Scleropages_formosus
ENSORLG00015009413	tsen54	92	67.133	ENSSMAG00000012449	tsen54	98	60.311	Scophthalmus_maximus
ENSORLG00015009413	tsen54	99	66.405	ENSSDUG00000021506	tsen54	98	65.815	Seriola_dumerili
ENSORLG00015009413	tsen54	99	66.405	ENSSLDG00000016303	tsen54	98	65.815	Seriola_lalandi_dorsalis
ENSORLG00015009413	tsen54	86	50.746	ENSSPUG00000008988	TSEN54	96	42.155	Sphenodon_punctatus
ENSORLG00015009413	tsen54	94	64.435	ENSSPAG00000008098	-	100	64.017	Stegastes_partitus
ENSORLG00015009413	tsen54	81	59.223	ENSSPAG00000008047	tsen54	99	58.765	Stegastes_partitus
ENSORLG00015009413	tsen54	98	44.814	ENSSSCG00000036852	TSEN54	97	45.988	Sus_scrofa
ENSORLG00015009413	tsen54	83	56.250	ENSTGUG00000008548	TSEN54	99	44.248	Taeniopygia_guttata
ENSORLG00015009413	tsen54	99	63.730	ENSTRUG00000004230	tsen54	98	63.730	Takifugu_rubripes
ENSORLG00015009413	tsen54	98	61.000	ENSTNIG00000011281	tsen54	98	62.677	Tetraodon_nigroviridis
ENSORLG00015009413	tsen54	72	60.360	ENSTTRG00000015828	TSEN54	97	43.115	Tursiops_truncatus
ENSORLG00015009413	tsen54	99	52.866	ENSUAMG00000010045	TSEN54	93	52.866	Ursus_americanus
ENSORLG00015009413	tsen54	64	66.667	ENSUMAG00000008979	TSEN54	99	42.212	Ursus_maritimus
ENSORLG00015009413	tsen54	98	44.402	ENSVVUG00000011411	TSEN54	98	44.894	Vulpes_vulpes
ENSORLG00015009413	tsen54	98	44.711	ENSXETG00000012532	tsen54	100	62.500	Xenopus_tropicalis
ENSORLG00015009413	tsen54	98	60.663	ENSXCOG00000018245	tsen54	99	62.162	Xiphophorus_couchianus
ENSORLG00015009413	tsen54	99	68.098	ENSXMAG00000018818	tsen54	98	68.098	Xiphophorus_maculatus