EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015009569 (Gene tree)
Gene ID: -
Gene Symbol: srsf7a
Alias: -
Full Name: serine/arginine-rich splicing factor 7a
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 6126 bases
Position: chr13:2694054-2700179
Accession: ZDB-GENE-040426-1798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015008767	RRM_1	PF00076.22	9.4e-16	1	1
ENSORLP00015027465	RRM_1	PF00076.22	1e-15	1	1
ENSORLP00015027468	RRM_1	PF00076.22	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015000260	-	2041	-	ENSORLP00015008767	250 (aa)	-	-
ENSORLT00015000278	-	2159	-	ENSORLP00015027468	301 (aa)	-	-
ENSORLT00015000303	-	1521	-	ENSORLP00015027465	264 (aa)	-	-

Gene Model

Click here to download ENSORLG00015009569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009569	srsf7a	52	65.714	ENSAMXG00000007005	srsf7b	55	71.795	Astyanax_mexicanus
ENSORLG00015009569	srsf7a	53	93.182	ENSCSEG00000006378	srsf7a	82	96.522	Cynoglossus_semilaevis
ENSORLG00015009569	srsf7a	60	54.000	ENSCSEG00000002271	srsf3b	59	78.205	Cynoglossus_semilaevis
ENSORLG00015009569	srsf7a	94	64.344	ENSDARG00000035325	srsf7a	85	95.161	Danio_rerio
ENSORLG00015009569	srsf7a	53	48.851	ENSEBUG00000002677	-	52	68.354	Eptatretus_burgeri
ENSORLG00015009569	srsf7a	74	56.915	ENSELUG00000018155	srsf7b	83	73.913	Esox_lucius
ENSORLG00015009569	srsf7a	55	49.275	ENSFCAG00000028644	-	81	49.219	Felis_catus
ENSORLG00015009569	srsf7a	50	95.161	ENSFHEG00000007159	srsf7a	63	95.652	Fundulus_heteroclitus
ENSORLG00015009569	srsf7a	50	68.504	ENSGAFG00000008856	srsf7b	84	70.085	Gambusia_affinis
ENSORLG00015009569	srsf7a	50	60.630	ENSJJAG00000020230	-	71	62.609	Jaculus_jaculus
ENSORLG00015009569	srsf7a	70	65.143	ENSLACG00000018688	srsf7a	56	85.345	Latimeria_chalumnae
ENSORLG00015009569	srsf7a	58	62.585	ENSMAMG00000017138	srsf7b	50	73.913	Mastacembelus_armatus
ENSORLG00015009569	srsf7a	68	46.199	ENSMAUG00000011430	-	54	61.446	Mesocricetus_auratus
ENSORLG00015009569	srsf7a	50	94.400	ENSMMOG00000005208	srsf7a	76	96.522	Mola_mola
ENSORLG00015009569	srsf7a	51	69.231	ENSMEUG00000000773	-	59	75.221	Notamacropus_eugenii
ENSORLG00015009569	srsf7a	100	98.868	ENSORLG00000000746	srsf7a	100	98.868	Oryzias_latipes
ENSORLG00015009569	srsf7a	100	99.242	ENSORLG00020020654	srsf7a	100	99.242	Oryzias_latipes_hni
ENSORLG00015009569	srsf7a	60	54.000	ENSOMEG00000014893	srsf3b	52	78.205	Oryzias_melastigma
ENSORLG00015009569	srsf7a	59	50.955	ENSPMGG00000004040	srsf3b	62	74.359	Periophthalmus_magnuspinnatus
ENSORLG00015009569	srsf7a	50	65.873	ENSPMAG00000004472	srsf7a	56	70.000	Petromyzon_marinus
ENSORLG00015009569	srsf7a	50	95.161	ENSPREG00000020685	srsf7a	91	95.652	Poecilia_reticulata
ENSORLG00015009569	srsf7a	52	69.925	ENSSDUG00000021338	srsf7b	80	74.783	Seriola_dumerili
ENSORLG00015009569	srsf7a	50	95.968	ENSSPAG00000022192	srsf7a	92	96.522	Stegastes_partitus
ENSORLG00015009569	srsf7a	55	67.857	ENSSPAG00000017204	srsf7b	82	74.783	Stegastes_partitus
ENSORLG00015009569	srsf7a	52	52.985	ENSVVUG00000006092	-	70	63.014	Vulpes_vulpes