EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015009580 (Gene tree)
Gene ID: -
Gene Symbol: larp1b
Alias: -
Full Name: la-related protein 1B
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 25932 bases
Position: chr22:21814056-21839987
Accession: 101164766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015027471	La	PF05383.17	1.2e-20	1	1
ENSORLP00015008774	La	PF05383.17	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015000255	-	4333	XM_023951753	ENSORLP00015008774	1072 (aa)	XP_023807521	-
ENSORLT00015000281	-	4165	-	ENSORLP00015027471	1016 (aa)	-	-

Gene Model

Click here to download ENSORLG00015009580's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009580's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015009580	larp1b	89	52.044	ENSORLG00015007538	larp1	92	50.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009580	larp1b	87	54.740	ENSG00000138709	LARP1B	97	55.965	Homo_sapiens
ENSORLG00015009580	larp1b	100	77.401	ENSAPOG00000020101	larp1b	100	77.401	Acanthochromis_polyacanthus
ENSORLG00015009580	larp1b	52	52.257	ENSAMEG00000002748	LARP1B	99	52.356	Ailuropoda_melanoleuca
ENSORLG00015009580	larp1b	100	72.196	ENSACIG00000023890	larp1b	98	73.359	Amphilophus_citrinellus
ENSORLG00015009580	larp1b	90	73.126	ENSAOCG00000014268	larp1b	99	73.233	Amphiprion_ocellaris
ENSORLG00015009580	larp1b	100	77.005	ENSAPEG00000004126	larp1b	98	77.515	Amphiprion_percula
ENSORLG00015009580	larp1b	100	75.842	ENSATEG00000017849	larp1b	100	75.842	Anabas_testudineus
ENSORLG00015009580	larp1b	83	53.690	ENSAPLG00000010129	LARP1B	100	52.568	Anas_platyrhynchos
ENSORLG00015009580	larp1b	77	63.100	ENSACAG00000011338	LARP1B	93	56.823	Anolis_carolinensis
ENSORLG00015009580	larp1b	63	52.577	ENSANAG00000034618	LARP1B	83	53.405	Aotus_nancymaae
ENSORLG00015009580	larp1b	100	74.771	ENSACLG00000011948	larp1b	100	75.046	Astatotilapia_calliptera
ENSORLG00015009580	larp1b	94	56.929	ENSAMXG00000006805	larp1b	90	58.223	Astyanax_mexicanus
ENSORLG00015009580	larp1b	89	54.781	ENSBTAG00000012135	LARP1B	95	52.434	Bos_taurus
ENSORLG00015009580	larp1b	82	56.229	ENSCJAG00000003338	LARP1B	99	57.093	Callithrix_jacchus
ENSORLG00015009580	larp1b	82	59.647	ENSCAFG00000003831	LARP1B	99	59.647	Canis_familiaris
ENSORLG00015009580	larp1b	84	57.006	ENSCAFG00020018899	LARP1B	99	57.006	Canis_lupus_dingo
ENSORLG00015009580	larp1b	84	55.497	ENSCHIG00000023144	LARP1B	99	55.393	Capra_hircus
ENSORLG00015009580	larp1b	83	55.639	ENSCCAG00000021948	LARP1B	99	55.639	Cebus_capucinus
ENSORLG00015009580	larp1b	82	55.157	ENSCATG00000013541	LARP1B	97	55.157	Cercocebus_atys
ENSORLG00015009580	larp1b	82	55.844	ENSCSAG00000003582	LARP1B	97	55.844	Chlorocebus_sabaeus
ENSORLG00015009580	larp1b	83	51.706	ENSCHOG00000005354	LARP1B	80	55.701	Choloepus_hoffmanni
ENSORLG00015009580	larp1b	87	55.637	ENSCPBG00000017480	LARP1B	92	54.700	Chrysemys_picta_bellii
ENSORLG00015009580	larp1b	81	56.621	ENSCANG00000026958	LARP1B	97	56.621	Colobus_angolensis_palliatus
ENSORLG00015009580	larp1b	100	77.820	ENSCSEG00000013519	larp1b	95	79.049	Cynoglossus_semilaevis
ENSORLG00015009580	larp1b	100	72.167	ENSCVAG00000005046	larp1b	98	73.684	Cyprinodon_variegatus
ENSORLG00015009580	larp1b	99	60.566	ENSDARG00000061169	larp1b	95	60.837	Danio_rerio
ENSORLG00015009580	larp1b	65	53.535	ENSETEG00000012497	LARP1B	74	53.535	Echinops_telfairi
ENSORLG00015009580	larp1b	90	46.469	ENSEBUG00000003668	larp1b	93	47.817	Eptatretus_burgeri
ENSORLG00015009580	larp1b	85	55.451	ENSEASG00005018106	LARP1B	99	55.556	Equus_asinus_asinus
ENSORLG00015009580	larp1b	89	54.764	ENSECAG00000001088	LARP1B	88	54.900	Equus_caballus
ENSORLG00015009580	larp1b	88	53.796	ENSELUG00000023774	larp1b	93	64.659	Esox_lucius
ENSORLG00015009580	larp1b	82	53.125	ENSFALG00000008098	LARP1B	96	53.478	Ficedula_albicollis
ENSORLG00015009580	larp1b	100	76.641	ENSFHEG00000010264	larp1b	95	77.188	Fundulus_heteroclitus
ENSORLG00015009580	larp1b	91	61.299	ENSGMOG00000005207	larp1b	93	61.299	Gadus_morhua
ENSORLG00015009580	larp1b	91	52.794	ENSGALG00000010207	LARP1B	97	51.048	Gallus_gallus
ENSORLG00015009580	larp1b	89	77.997	ENSGAFG00000012012	larp1b	99	76.984	Gambusia_affinis
ENSORLG00015009580	larp1b	100	66.548	ENSGACG00000004609	larp1b	98	66.486	Gasterosteus_aculeatus
ENSORLG00015009580	larp1b	87	55.544	ENSGAGG00000017209	LARP1B	89	55.430	Gopherus_agassizii
ENSORLG00015009580	larp1b	82	55.965	ENSGGOG00000015900	LARP1B	97	55.965	Gorilla_gorilla
ENSORLG00015009580	larp1b	100	75.965	ENSHBUG00000009730	larp1b	100	76.255	Haplochromis_burtoni
ENSORLG00015009580	larp1b	69	76.231	ENSHCOG00000000918	larp1b	99	77.337	Hippocampus_comes
ENSORLG00015009580	larp1b	94	61.756	ENSIPUG00000012138	larp1b	87	62.171	Ictalurus_punctatus
ENSORLG00015009580	larp1b	99	72.585	ENSKMAG00000011589	larp1b	95	77.154	Kryptolebias_marmoratus
ENSORLG00015009580	larp1b	100	80.101	ENSLBEG00000005655	larp1b	100	75.919	Labrus_bergylta
ENSORLG00015009580	larp1b	92	57.696	ENSLACG00000015247	LARP1B	90	57.384	Latimeria_chalumnae
ENSORLG00015009580	larp1b	88	62.990	ENSLOCG00000010684	larp1b	96	58.800	Lepisosteus_oculatus
ENSORLG00015009580	larp1b	82	56.135	ENSMFAG00000002218	LARP1B	97	56.135	Macaca_fascicularis
ENSORLG00015009580	larp1b	82	56.135	ENSMMUG00000021347	LARP1B	97	56.135	Macaca_mulatta
ENSORLG00015009580	larp1b	81	53.426	ENSMNEG00000030406	LARP1B	97	53.310	Macaca_nemestrina
ENSORLG00015009580	larp1b	81	56.054	ENSMLEG00000009306	LARP1B	97	56.054	Mandrillus_leucophaeus
ENSORLG00015009580	larp1b	99	76.362	ENSMAMG00000000081	larp1b	98	76.710	Mastacembelus_armatus
ENSORLG00015009580	larp1b	73	78.610	ENSMZEG00005002545	larp1b	96	79.545	Maylandia_zebra
ENSORLG00015009580	larp1b	77	55.238	ENSMGAG00000004809	LARP1B	74	58.683	Meleagris_gallopavo
ENSORLG00015009580	larp1b	84	57.403	ENSMICG00000036111	LARP1B	99	57.403	Microcebus_murinus
ENSORLG00015009580	larp1b	89	54.633	ENSMODG00000012300	LARP1B	95	52.708	Monodelphis_domestica
ENSORLG00015009580	larp1b	100	74.612	ENSMALG00000003638	larp1b	93	80.679	Monopterus_albus
ENSORLG00015009580	larp1b	88	55.556	ENSMPUG00000017365	LARP1B	88	54.950	Mustela_putorius_furo
ENSORLG00015009580	larp1b	83	54.123	ENSMLUG00000010229	LARP1B	99	54.545	Myotis_lucifugus
ENSORLG00015009580	larp1b	93	72.208	ENSNBRG00000023846	larp1b	100	73.223	Neolamprologus_brichardi
ENSORLG00015009580	larp1b	84	54.863	ENSNLEG00000013819	LARP1B	99	54.863	Nomascus_leucogenys
ENSORLG00015009580	larp1b	64	58.755	ENSMEUG00000010308	LARP1B	75	58.755	Notamacropus_eugenii
ENSORLG00015009580	larp1b	76	51.733	ENSOPRG00000005478	LARP1B	78	53.370	Ochotona_princeps
ENSORLG00015009580	larp1b	87	75.306	ENSONIG00000012386	larp1b	100	74.923	Oreochromis_niloticus
ENSORLG00015009580	larp1b	84	55.319	ENSOCUG00000013330	LARP1B	99	55.779	Oryctolagus_cuniculus
ENSORLG00015009580	larp1b	100	98.031	ENSORLG00000017954	larp1b	100	98.031	Oryzias_latipes
ENSORLG00015009580	larp1b	100	98.228	ENSORLG00020013081	larp1b	100	98.228	Oryzias_latipes_hni
ENSORLG00015009580	larp1b	100	88.000	ENSOMEG00000004210	larp1b	100	88.109	Oryzias_melastigma
ENSORLG00015009580	larp1b	82	57.976	ENSOGAG00000005771	LARP1B	100	57.536	Otolemur_garnettii
ENSORLG00015009580	larp1b	82	56.713	ENSOARG00000015300	LARP1B	98	56.069	Ovis_aries
ENSORLG00015009580	larp1b	82	56.074	ENSPPAG00000030439	LARP1B	97	56.074	Pan_paniscus
ENSORLG00015009580	larp1b	82	56.074	ENSPTRG00000016437	LARP1B	97	56.074	Pan_troglodytes
ENSORLG00015009580	larp1b	82	56.135	ENSPANG00000012488	LARP1B	97	56.135	Papio_anubis
ENSORLG00015009580	larp1b	86	56.000	ENSPKIG00000014360	larp1b	96	56.333	Paramormyrops_kingsleyae
ENSORLG00015009580	larp1b	86	55.359	ENSPSIG00000012885	LARP1B	99	55.348	Pelodiscus_sinensis
ENSORLG00015009580	larp1b	74	71.855	ENSPMGG00000007207	larp1b	91	72.763	Periophthalmus_magnuspinnatus
ENSORLG00015009580	larp1b	60	57.143	ENSPMAG00000002700	larp1b	97	49.845	Petromyzon_marinus
ENSORLG00015009580	larp1b	85	57.068	ENSPCIG00000026516	LARP1B	97	62.180	Phascolarctos_cinereus
ENSORLG00015009580	larp1b	63	70.749	ENSPFOG00000022837	-	99	71.182	Poecilia_formosa
ENSORLG00015009580	larp1b	100	72.752	ENSPFOG00000019519	larp1b	98	74.000	Poecilia_formosa
ENSORLG00015009580	larp1b	100	74.317	ENSPLAG00000007115	larp1b	98	75.349	Poecilia_latipinna
ENSORLG00015009580	larp1b	100	76.561	ENSPMEG00000001224	larp1b	98	77.701	Poecilia_mexicana
ENSORLG00015009580	larp1b	84	53.390	ENSPCAG00000007546	LARP1B	99	54.189	Procavia_capensis
ENSORLG00015009580	larp1b	74	58.333	ENSPCOG00000021874	LARP1B	98	58.333	Propithecus_coquereli
ENSORLG00015009580	larp1b	84	52.417	ENSPVAG00000005373	LARP1B	99	52.478	Pteropus_vampyrus
ENSORLG00015009580	larp1b	73	76.842	ENSPNYG00000017357	larp1b	96	77.763	Pundamilia_nyererei
ENSORLG00015009580	larp1b	93	59.394	ENSPNAG00000008823	larp1b	91	61.983	Pygocentrus_nattereri
ENSORLG00015009580	larp1b	82	56.135	ENSRROG00000030771	LARP1B	97	56.135	Rhinopithecus_roxellana
ENSORLG00015009580	larp1b	61	51.714	ENSSHAG00000014474	LARP1B	99	52.155	Sarcophilus_harrisii
ENSORLG00015009580	larp1b	84	78.431	ENSSMAG00000006347	larp1b	96	77.287	Scophthalmus_maximus
ENSORLG00015009580	larp1b	100	75.626	ENSSDUG00000004182	larp1b	97	76.915	Seriola_dumerili
ENSORLG00015009580	larp1b	95	70.256	ENSSLDG00000014613	larp1b	99	75.724	Seriola_lalandi_dorsalis
ENSORLG00015009580	larp1b	81	56.497	ENSSPUG00000011837	LARP1B	97	55.568	Sphenodon_punctatus
ENSORLG00015009580	larp1b	96	76.791	ENSSPAG00000017772	larp1b	98	75.648	Stegastes_partitus
ENSORLG00015009580	larp1b	89	54.188	ENSSSCG00000034280	LARP1B	98	76.404	Sus_scrofa
ENSORLG00015009580	larp1b	78	57.020	ENSTGUG00000002098	-	84	61.441	Taeniopygia_guttata
ENSORLG00015009580	larp1b	99	73.099	ENSTRUG00000005612	larp1b	99	73.419	Takifugu_rubripes
ENSORLG00015009580	larp1b	88	73.713	ENSTNIG00000012398	larp1b	92	79.911	Tetraodon_nigroviridis
ENSORLG00015009580	larp1b	62	52.042	ENSTBEG00000004177	LARP1B	67	59.790	Tupaia_belangeri
ENSORLG00015009580	larp1b	75	56.543	ENSTTRG00000012984	LARP1B	76	59.574	Tursiops_truncatus
ENSORLG00015009580	larp1b	82	57.692	ENSUMAG00000007373	LARP1B	95	57.489	Ursus_maritimus
ENSORLG00015009580	larp1b	66	55.618	ENSVPAG00000007223	LARP1B	78	55.618	Vicugna_pacos
ENSORLG00015009580	larp1b	84	57.021	ENSVVUG00000011307	LARP1B	99	57.031	Vulpes_vulpes
ENSORLG00015009580	larp1b	89	50.978	ENSXETG00000022512	larp1b	94	50.719	Xenopus_tropicalis
ENSORLG00015009580	larp1b	89	70.618	ENSXCOG00000004435	larp1b	95	71.122	Xiphophorus_couchianus
ENSORLG00015009580	larp1b	100	77.966	ENSXMAG00000008150	larp1b	100	75.091	Xiphophorus_maculatus