EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015009581 (Gene tree)
Gene ID: -
Gene Symbol: thumpd1
Alias: -
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6059 bases
Position: chr1:23577349-23583407
Accession: ZDB-GENE-040426-1805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015008783	THUMP	PF02926.17	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015000241	-	1967	-	ENSORLP00015008783	306 (aa)	-	-

Gene Model

Click here to download ENSORLG00015009581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009581's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009581	thumpd1	90	54.930	ENSG00000066654	THUMPD1	67	61.277	Homo_sapiens
ENSORLG00015009581	thumpd1	99	75.079	ENSAPOG00000008440	thumpd1	98	76.972	Acanthochromis_polyacanthus
ENSORLG00015009581	thumpd1	97	53.355	ENSAMEG00000006257	THUMPD1	86	53.205	Ailuropoda_melanoleuca
ENSORLG00015009581	thumpd1	91	80.634	ENSACIG00000024395	thumpd1	88	80.488	Amphilophus_citrinellus
ENSORLG00015009581	thumpd1	99	75.394	ENSAOCG00000003509	thumpd1	98	76.972	Amphiprion_ocellaris
ENSORLG00015009581	thumpd1	99	75.949	ENSAPEG00000010515	thumpd1	98	77.848	Amphiprion_percula
ENSORLG00015009581	thumpd1	99	77.070	ENSATEG00000004737	thumpd1	98	77.070	Anabas_testudineus
ENSORLG00015009581	thumpd1	87	56.522	ENSAPLG00000015259	THUMPD1	88	59.524	Anas_platyrhynchos
ENSORLG00015009581	thumpd1	84	54.909	ENSACAG00000009625	-	85	56.667	Anolis_carolinensis
ENSORLG00015009581	thumpd1	90	45.070	ENSANAG00000027040	-	62	49.362	Aotus_nancymaae
ENSORLG00015009581	thumpd1	89	55.052	ENSANAG00000026882	-	67	62.128	Aotus_nancymaae
ENSORLG00015009581	thumpd1	99	44.156	ENSANAG00000027311	-	75	47.909	Aotus_nancymaae
ENSORLG00015009581	thumpd1	96	75.817	ENSACLG00000004830	thumpd1	91	79.181	Astatotilapia_calliptera
ENSORLG00015009581	thumpd1	97	56.592	ENSAMXG00000012356	thumpd1	78	63.813	Astyanax_mexicanus
ENSORLG00015009581	thumpd1	82	58.366	ENSBTAG00000047673	THUMPD1	72	58.366	Bos_taurus
ENSORLG00015009581	thumpd1	87	56.089	ENSCJAG00000009499	THUMPD1	67	61.702	Callithrix_jacchus
ENSORLG00015009581	thumpd1	89	54.770	ENSCAFG00000017985	THUMPD1	79	54.770	Canis_familiaris
ENSORLG00015009581	thumpd1	89	54.770	ENSCAFG00020021861	THUMPD1	79	54.770	Canis_lupus_dingo
ENSORLG00015009581	thumpd1	82	59.375	ENSCHIG00000010134	THUMPD1	71	59.375	Capra_hircus
ENSORLG00015009581	thumpd1	90	54.770	ENSTSYG00000011537	THUMPD1	69	60.494	Carlito_syrichta
ENSORLG00015009581	thumpd1	78	62.397	ENSCPOG00000023684	-	68	62.397	Cavia_porcellus
ENSORLG00015009581	thumpd1	78	62.397	ENSCPOG00000008919	-	68	62.397	Cavia_porcellus
ENSORLG00015009581	thumpd1	90	53.025	ENSCCAG00000019379	-	59	58.298	Cebus_capucinus
ENSORLG00015009581	thumpd1	89	54.704	ENSCCAG00000030205	THUMPD1	67	61.702	Cebus_capucinus
ENSORLG00015009581	thumpd1	93	45.638	ENSCATG00000020844	-	72	49.049	Cercocebus_atys
ENSORLG00015009581	thumpd1	90	55.634	ENSCATG00000040309	THUMPD1	67	62.128	Cercocebus_atys
ENSORLG00015009581	thumpd1	75	63.248	ENSCLAG00000016508	THUMPD1	66	63.248	Chinchilla_lanigera
ENSORLG00015009581	thumpd1	90	55.634	ENSCSAG00000007610	THUMPD1	67	62.128	Chlorocebus_sabaeus
ENSORLG00015009581	thumpd1	95	40.850	ENSCSAG00000009860	-	60	42.857	Chlorocebus_sabaeus
ENSORLG00015009581	thumpd1	89	56.294	ENSCHOG00000005587	THUMPD1	66	62.821	Choloepus_hoffmanni
ENSORLG00015009581	thumpd1	95	56.811	ENSCPBG00000019055	THUMPD1	75	61.887	Chrysemys_picta_bellii
ENSORLG00015009581	thumpd1	81	31.111	ENSCING00000021274	-	95	31.111	Ciona_intestinalis
ENSORLG00015009581	thumpd1	86	50.183	ENSCANG00000038770	THUMPD1	72	55.804	Colobus_angolensis_palliatus
ENSORLG00015009581	thumpd1	87	50.549	ENSCANG00000035822	-	72	56.502	Colobus_angolensis_palliatus
ENSORLG00015009581	thumpd1	79	61.789	ENSCGRG00001014829	Thumpd1	69	61.983	Cricetulus_griseus_chok1gshd
ENSORLG00015009581	thumpd1	78	61.983	ENSCGRG00000000060	Thumpd1	69	61.983	Cricetulus_griseus_crigri
ENSORLG00015009581	thumpd1	99	71.242	ENSCSEG00000002041	thumpd1	84	79.693	Cynoglossus_semilaevis
ENSORLG00015009581	thumpd1	91	75.172	ENSCVAG00000014960	thumpd1	90	75.172	Cyprinodon_variegatus
ENSORLG00015009581	thumpd1	83	59.449	ENSDARG00000100264	thumpd1	73	59.449	Danio_rerio
ENSORLG00015009581	thumpd1	83	59.542	ENSDNOG00000043510	THUMPD1	73	59.542	Dasypus_novemcinctus
ENSORLG00015009581	thumpd1	75	61.345	ENSDORG00000028216	Thumpd1	67	62.185	Dipodomys_ordii
ENSORLG00015009581	thumpd1	89	31.293	FBgn0035532	CG15014	83	31.636	Drosophila_melanogaster
ENSORLG00015009581	thumpd1	89	52.688	ENSETEG00000002763	THUMPD1	65	52.330	Echinops_telfairi
ENSORLG00015009581	thumpd1	84	42.537	ENSEBUG00000011011	THUMPD1	73	42.537	Eptatretus_burgeri
ENSORLG00015009581	thumpd1	50	54.088	ENSEASG00005017428	-	55	68.519	Equus_asinus_asinus
ENSORLG00015009581	thumpd1	83	59.459	ENSECAG00000005354	THUMPD1	73	59.459	Equus_caballus
ENSORLG00015009581	thumpd1	90	56.272	ENSEEUG00000011256	THUMPD1	57	62.553	Erinaceus_europaeus
ENSORLG00015009581	thumpd1	94	68.836	ENSELUG00000013612	thumpd1	66	70.877	Esox_lucius
ENSORLG00015009581	thumpd1	89	55.245	ENSFCAG00000039296	THUMPD1	80	54.545	Felis_catus
ENSORLG00015009581	thumpd1	74	58.051	ENSFALG00000014029	THUMPD1	85	59.322	Ficedula_albicollis
ENSORLG00015009581	thumpd1	91	75.685	ENSFHEG00000013319	thumpd1	84	77.740	Fundulus_heteroclitus
ENSORLG00015009581	thumpd1	97	65.686	ENSGMOG00000003369	thumpd1	88	68.327	Gadus_morhua
ENSORLG00015009581	thumpd1	52	59.375	ENSGALG00000031384	-	72	59.494	Gallus_gallus
ENSORLG00015009581	thumpd1	99	74.598	ENSGAFG00000011000	thumpd1	89	78.671	Gambusia_affinis
ENSORLG00015009581	thumpd1	98	71.338	ENSGACG00000019511	thumpd1	82	79.851	Gasterosteus_aculeatus
ENSORLG00015009581	thumpd1	95	56.811	ENSGAGG00000008225	THUMPD1	80	63.035	Gopherus_agassizii
ENSORLG00015009581	thumpd1	87	56.296	ENSGGOG00000005231	-	54	61.702	Gorilla_gorilla
ENSORLG00015009581	thumpd1	65	49.020	ENSGGOG00000043232	-	63	49.020	Gorilla_gorilla
ENSORLG00015009581	thumpd1	96	75.817	ENSHBUG00000017996	thumpd1	91	79.181	Haplochromis_burtoni
ENSORLG00015009581	thumpd1	59	49.724	ENSHGLG00000000952	-	64	55.782	Heterocephalus_glaber_female
ENSORLG00015009581	thumpd1	89	57.295	ENSHGLG00000011001	-	66	64.103	Heterocephalus_glaber_female
ENSORLG00015009581	thumpd1	59	49.724	ENSHGLG00100010577	-	64	55.782	Heterocephalus_glaber_male
ENSORLG00015009581	thumpd1	89	57.295	ENSHGLG00100016023	THUMPD1	66	64.103	Heterocephalus_glaber_male
ENSORLG00015009581	thumpd1	88	63.569	ENSHCOG00000008618	thumpd1	59	63.569	Hippocampus_comes
ENSORLG00015009581	thumpd1	75	63.158	ENSIPUG00000012500	thumpd1	62	60.853	Ictalurus_punctatus
ENSORLG00015009581	thumpd1	90	56.537	ENSSTOG00000007011	THUMPD1	69	61.317	Ictidomys_tridecemlineatus
ENSORLG00015009581	thumpd1	82	56.471	ENSJJAG00000004295	-	72	56.471	Jaculus_jaculus
ENSORLG00015009581	thumpd1	90	61.888	ENSKMAG00000009545	thumpd1	64	65.134	Kryptolebias_marmoratus
ENSORLG00015009581	thumpd1	99	73.354	ENSLBEG00000009349	thumpd1	98	73.354	Labrus_bergylta
ENSORLG00015009581	thumpd1	82	60.777	ENSLACG00000005833	THUMPD1	77	60.777	Latimeria_chalumnae
ENSORLG00015009581	thumpd1	85	65.283	ENSLOCG00000000854	thumpd1	84	65.283	Lepisosteus_oculatus
ENSORLG00015009581	thumpd1	98	52.412	ENSLAFG00000025838	THUMPD1	72	58.527	Loxodonta_africana
ENSORLG00015009581	thumpd1	72	52.423	ENSMFAG00000041474	-	72	52.423	Macaca_fascicularis
ENSORLG00015009581	thumpd1	90	55.634	ENSMFAG00000036996	THUMPD1	67	62.128	Macaca_fascicularis
ENSORLG00015009581	thumpd1	90	55.634	ENSMMUG00000004225	THUMPD1	67	62.128	Macaca_mulatta
ENSORLG00015009581	thumpd1	72	52.655	ENSMMUG00000038414	-	72	52.655	Macaca_mulatta
ENSORLG00015009581	thumpd1	90	55.634	ENSMNEG00000020726	THUMPD1	67	62.128	Macaca_nemestrina
ENSORLG00015009581	thumpd1	72	52.423	ENSMNEG00000038856	-	72	52.423	Macaca_nemestrina
ENSORLG00015009581	thumpd1	90	55.634	ENSMLEG00000036436	THUMPD1	67	62.128	Mandrillus_leucophaeus
ENSORLG00015009581	thumpd1	72	52.655	ENSMLEG00000030012	-	72	52.655	Mandrillus_leucophaeus
ENSORLG00015009581	thumpd1	97	77.124	ENSMAMG00000006858	thumpd1	96	76.774	Mastacembelus_armatus
ENSORLG00015009581	thumpd1	96	75.817	ENSMZEG00005013693	thumpd1	91	79.181	Maylandia_zebra
ENSORLG00015009581	thumpd1	66	58.911	ENSMGAG00000010340	THUMPD1	97	59.000	Meleagris_gallopavo
ENSORLG00015009581	thumpd1	82	60.392	ENSMAUG00000013306	Thumpd1	70	60.392	Mesocricetus_auratus
ENSORLG00015009581	thumpd1	68	51.628	ENSMICG00000030865	-	61	51.628	Microcebus_murinus
ENSORLG00015009581	thumpd1	75	62.979	ENSMICG00000038483	-	66	62.979	Microcebus_murinus
ENSORLG00015009581	thumpd1	78	61.157	ENSMOCG00000003447	Thumpd1	69	61.157	Microtus_ochrogaster
ENSORLG00015009581	thumpd1	87	77.860	ENSMMOG00000011323	thumpd1	81	77.860	Mola_mola
ENSORLG00015009581	thumpd1	87	58.242	ENSMODG00000024776	-	74	60.517	Monodelphis_domestica
ENSORLG00015009581	thumpd1	97	54.341	ENSMODG00000006971	-	73	60.148	Monodelphis_domestica
ENSORLG00015009581	thumpd1	87	81.413	ENSMALG00000019522	thumpd1	91	80.351	Monopterus_albus
ENSORLG00015009581	thumpd1	78	61.157	MGP_CAROLIEiJ_G0030382	Thumpd1	69	61.157	Mus_caroli
ENSORLG00015009581	thumpd1	78	61.570	ENSMUSG00000030942	Thumpd1	69	61.570	Mus_musculus
ENSORLG00015009581	thumpd1	78	62.295	MGP_PahariEiJ_G0013593	Thumpd1	69	62.295	Mus_pahari
ENSORLG00015009581	thumpd1	82	59.055	ENSMLUG00000010547	THUMPD1	71	59.055	Myotis_lucifugus
ENSORLG00015009581	thumpd1	89	55.872	ENSNGAG00000018643	Thumpd1	67	63.404	Nannospalax_galili
ENSORLG00015009581	thumpd1	96	74.919	ENSNBRG00000006987	thumpd1	85	78.571	Neolamprologus_brichardi
ENSORLG00015009581	thumpd1	98	52.229	ENSNLEG00000012369	THUMPD1	75	57.358	Nomascus_leucogenys
ENSORLG00015009581	thumpd1	75	61.966	ENSODEG00000012360	THUMPD1	66	61.966	Octodon_degus
ENSORLG00015009581	thumpd1	90	78.322	ENSONIG00000000146	thumpd1	100	80.070	Oreochromis_niloticus
ENSORLG00015009581	thumpd1	86	59.259	ENSOANG00000014297	THUMPD1	74	59.259	Ornithorhynchus_anatinus
ENSORLG00015009581	thumpd1	83	59.615	ENSOCUG00000009895	-	74	59.615	Oryctolagus_cuniculus
ENSORLG00015009581	thumpd1	100	97.720	ENSORLG00000027557	thumpd1	100	97.720	Oryzias_latipes
ENSORLG00015009581	thumpd1	100	98.693	ENSORLG00020010206	thumpd1	100	98.693	Oryzias_latipes_hni
ENSORLG00015009581	thumpd1	100	84.308	ENSOMEG00000019361	thumpd1	100	85.538	Oryzias_melastigma
ENSORLG00015009581	thumpd1	75	61.702	ENSOGAG00000026723	THUMPD1	66	61.702	Otolemur_garnettii
ENSORLG00015009581	thumpd1	82	58.755	ENSOARG00000013107	THUMPD1	71	58.755	Ovis_aries
ENSORLG00015009581	thumpd1	87	47.445	ENSPPAG00000001653	-	68	52.889	Pan_paniscus
ENSORLG00015009581	thumpd1	87	55.926	ENSPPAG00000033818	-	54	61.277	Pan_paniscus
ENSORLG00015009581	thumpd1	89	55.594	ENSPPRG00000014118	-	80	55.245	Panthera_pardus
ENSORLG00015009581	thumpd1	89	55.594	ENSPTIG00000013856	-	80	55.245	Panthera_tigris_altaica
ENSORLG00015009581	thumpd1	84	45.283	ENSPTRG00000046073	-	64	50.463	Pan_troglodytes
ENSORLG00015009581	thumpd1	87	55.926	ENSPTRG00000007848	THUMPD1	54	61.277	Pan_troglodytes
ENSORLG00015009581	thumpd1	72	52.863	ENSPANG00000034881	-	72	52.863	Papio_anubis
ENSORLG00015009581	thumpd1	90	55.634	ENSPANG00000025507	THUMPD1	67	62.128	Papio_anubis
ENSORLG00015009581	thumpd1	94	61.224	ENSPKIG00000014491	thumpd1	85	63.669	Paramormyrops_kingsleyae
ENSORLG00015009581	thumpd1	85	58.955	ENSPSIG00000012430	THUMPD1	92	59.176	Pelodiscus_sinensis
ENSORLG00015009581	thumpd1	82	74.419	ENSPMGG00000014479	thumpd1	90	74.419	Periophthalmus_magnuspinnatus
ENSORLG00015009581	thumpd1	51	44.586	ENSPEMG00000002608	-	62	45.223	Peromyscus_maniculatus_bairdii
ENSORLG00015009581	thumpd1	66	46.078	ENSPMAG00000001389	thumpd1	88	48.649	Petromyzon_marinus
ENSORLG00015009581	thumpd1	75	63.983	ENSPCIG00000029241	THUMPD1	51	61.390	Phascolarctos_cinereus
ENSORLG00015009581	thumpd1	99	75.399	ENSPFOG00000012649	thumpd1	89	79.167	Poecilia_formosa
ENSORLG00015009581	thumpd1	99	74.598	ENSPLAG00000000137	thumpd1	97	75.321	Poecilia_latipinna
ENSORLG00015009581	thumpd1	99	75.641	ENSPMEG00000007750	thumpd1	89	79.443	Poecilia_mexicana
ENSORLG00015009581	thumpd1	84	79.705	ENSPREG00000000144	thumpd1	92	79.487	Poecilia_reticulata
ENSORLG00015009581	thumpd1	72	55.251	ENSPPYG00000007160	-	67	61.957	Pongo_abelii
ENSORLG00015009581	thumpd1	62	62.105	ENSPCAG00000001534	THUMPD1	67	62.105	Procavia_capensis
ENSORLG00015009581	thumpd1	75	62.979	ENSPCOG00000024663	THUMPD1	66	62.979	Propithecus_coquereli
ENSORLG00015009581	thumpd1	89	53.497	ENSPVAG00000005659	-	65	59.574	Pteropus_vampyrus
ENSORLG00015009581	thumpd1	57	51.630	ENSPVAG00000003286	-	59	61.654	Pteropus_vampyrus
ENSORLG00015009581	thumpd1	96	75.817	ENSPNYG00000007061	thumpd1	90	79.181	Pundamilia_nyererei
ENSORLG00015009581	thumpd1	93	59.468	ENSPNAG00000024872	thumpd1	84	66.148	Pygocentrus_nattereri
ENSORLG00015009581	thumpd1	90	55.282	ENSRBIG00000040752	THUMPD1	67	62.128	Rhinopithecus_bieti
ENSORLG00015009581	thumpd1	87	50.916	ENSRBIG00000040136	-	75	56.951	Rhinopithecus_bieti
ENSORLG00015009581	thumpd1	90	55.282	ENSRROG00000042189	THUMPD1	67	62.128	Rhinopithecus_roxellana
ENSORLG00015009581	thumpd1	87	50.549	ENSRROG00000045699	-	75	56.502	Rhinopithecus_roxellana
ENSORLG00015009581	thumpd1	96	52.244	ENSSBOG00000034246	THUMPD1	72	58.301	Saimiri_boliviensis_boliviensis
ENSORLG00015009581	thumpd1	93	56.849	ENSSHAG00000003853	THUMPD1	71	61.961	Sarcophilus_harrisii
ENSORLG00015009581	thumpd1	90	56.786	ENSSFOG00015007512	thumpd1	85	56.786	Scleropages_formosus
ENSORLG00015009581	thumpd1	99	73.765	ENSSMAG00000000723	thumpd1	98	75.617	Scophthalmus_maximus
ENSORLG00015009581	thumpd1	98	76.677	ENSSDUG00000014502	thumpd1	90	82.007	Seriola_dumerili
ENSORLG00015009581	thumpd1	98	76.038	ENSSLDG00000007694	thumpd1	90	81.315	Seriola_lalandi_dorsalis
ENSORLG00015009581	thumpd1	95	54.575	ENSSPUG00000005096	THUMPD1	86	58.719	Sphenodon_punctatus
ENSORLG00015009581	thumpd1	99	78.095	ENSSPAG00000006993	thumpd1	98	80.000	Stegastes_partitus
ENSORLG00015009581	thumpd1	75	63.559	ENSSSCG00000024748	THUMPD1	66	63.559	Sus_scrofa
ENSORLG00015009581	thumpd1	88	57.194	ENSTGUG00000009247	THUMPD1	91	61.508	Taeniopygia_guttata
ENSORLG00015009581	thumpd1	96	75.987	ENSTRUG00000015656	thumpd1	89	78.819	Takifugu_rubripes
ENSORLG00015009581	thumpd1	95	73.913	ENSTNIG00000001584	thumpd1	88	81.273	Tetraodon_nigroviridis
ENSORLG00015009581	thumpd1	97	52.131	ENSTBEG00000005252	THUMPD1	65	57.364	Tupaia_belangeri
ENSORLG00015009581	thumpd1	75	62.979	ENSTTRG00000016435	THUMPD1	66	62.979	Tursiops_truncatus
ENSORLG00015009581	thumpd1	58	48.128	ENSUAMG00000005779	-	81	47.849	Ursus_americanus
ENSORLG00015009581	thumpd1	82	59.375	ENSVPAG00000003422	THUMPD1	73	59.375	Vicugna_pacos
ENSORLG00015009581	thumpd1	89	55.439	ENSVVUG00000023241	THUMPD1	65	61.702	Vulpes_vulpes
ENSORLG00015009581	thumpd1	64	61.111	ENSXETG00000005539	thumpd1	99	48.789	Xenopus_tropicalis
ENSORLG00015009581	thumpd1	91	78.397	ENSXMAG00000026052	thumpd1	97	75.641	Xiphophorus_maculatus