EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015009858 (Gene tree)
Gene ID: -
Gene Symbol: trnau1ap
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 4458 bases
Position: chr11:8465676-8470133
Accession: 101171093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015027680	RRM_1	PF00076.22	1.5e-27	1	2
ENSORLP00015027680	RRM_1	PF00076.22	1.5e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015031235	-	1919	-	ENSORLP00015027680	305 (aa)	XP_004074210	H2M3Q7

Gene Model

Click here to download ENSORLG00015009858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015009858	trnau1ap	94	41.566	ENSORLG00015021098	trnau1apb	96	42.598
ENSORLG00015009858	trnau1ap	56	30.435	ENSORLG00015015042	pabpc4	57	30.435
ENSORLG00015009858	trnau1ap	55	32.000	ENSORLG00015011511	tia1	59	32.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009858	trnau1ap	95	56.849	ENSG00000180098	TRNAU1AP	98	58.020	Homo_sapiens
ENSORLG00015009858	trnau1ap	100	80.583	ENSAPOG00000007148	TRNAU1AP	100	81.553	Acanthochromis_polyacanthus
ENSORLG00015009858	trnau1ap	95	56.849	ENSAMEG00000011367	TRNAU1AP	98	58.219	Ailuropoda_melanoleuca
ENSORLG00015009858	trnau1ap	91	94.382	ENSACIG00000004161	trnau1apa	93	94.382	Amphilophus_citrinellus
ENSORLG00015009858	trnau1ap	100	81.759	ENSAOCG00000008056	trnau1apa	100	81.759	Amphiprion_ocellaris
ENSORLG00015009858	trnau1ap	100	81.759	ENSAPEG00000008868	trnau1apa	100	81.759	Amphiprion_percula
ENSORLG00015009858	trnau1ap	100	79.114	ENSATEG00000012140	trnau1apa	100	77.215	Anabas_testudineus
ENSORLG00015009858	trnau1ap	92	57.295	ENSAPLG00000002606	TRNAU1AP	98	59.431	Anas_platyrhynchos
ENSORLG00015009858	trnau1ap	71	37.900	ENSACAG00000004205	-	86	38.367	Anolis_carolinensis
ENSORLG00015009858	trnau1ap	94	47.440	ENSACAG00000003995	-	97	48.805	Anolis_carolinensis
ENSORLG00015009858	trnau1ap	95	56.849	ENSANAG00000018976	TRNAU1AP	98	58.020	Aotus_nancymaae
ENSORLG00015009858	trnau1ap	100	83.062	ENSACLG00000018515	trnau1apa	100	83.062	Astatotilapia_calliptera
ENSORLG00015009858	trnau1ap	94	68.889	ENSAMXG00000029240	-	97	68.889	Astyanax_mexicanus
ENSORLG00015009858	trnau1ap	99	55.195	ENSAMXG00000013750	trnau1apa	97	55.195	Astyanax_mexicanus
ENSORLG00015009858	trnau1ap	95	56.849	ENSBTAG00000010393	TRNAU1AP	98	58.020	Bos_taurus
ENSORLG00015009858	trnau1ap	95	56.849	ENSCJAG00000009717	TRNAU1AP	98	58.020	Callithrix_jacchus
ENSORLG00015009858	trnau1ap	95	56.849	ENSCAFG00000011735	TRNAU1AP	98	58.020	Canis_familiaris
ENSORLG00015009858	trnau1ap	95	56.849	ENSCAFG00020023584	TRNAU1AP	98	58.020	Canis_lupus_dingo
ENSORLG00015009858	trnau1ap	95	56.849	ENSCHIG00000023215	TRNAU1AP	98	58.020	Capra_hircus
ENSORLG00015009858	trnau1ap	95	56.849	ENSTSYG00000003506	TRNAU1AP	98	58.020	Carlito_syrichta
ENSORLG00015009858	trnau1ap	95	56.849	ENSCPOG00000001925	TRNAU1AP	98	58.020	Cavia_porcellus
ENSORLG00015009858	trnau1ap	95	56.849	ENSCCAG00000037506	TRNAU1AP	98	58.020	Cebus_capucinus
ENSORLG00015009858	trnau1ap	95	56.507	ENSCATG00000044617	TRNAU1AP	98	57.679	Cercocebus_atys
ENSORLG00015009858	trnau1ap	95	56.849	ENSCLAG00000008223	TRNAU1AP	98	58.020	Chinchilla_lanigera
ENSORLG00015009858	trnau1ap	95	56.507	ENSCSAG00000001014	TRNAU1AP	98	57.679	Chlorocebus_sabaeus
ENSORLG00015009858	trnau1ap	92	55.986	ENSCPBG00000000121	TRNAU1AP	98	57.651	Chrysemys_picta_bellii
ENSORLG00015009858	trnau1ap	52	50.625	ENSCSAVG00000011781	-	84	50.625	Ciona_savignyi
ENSORLG00015009858	trnau1ap	95	48.630	ENSCANG00000041949	TRNAU1AP	97	52.432	Colobus_angolensis_palliatus
ENSORLG00015009858	trnau1ap	95	56.849	ENSCGRG00001004713	Trnau1ap	98	58.020	Cricetulus_griseus_chok1gshd
ENSORLG00015009858	trnau1ap	95	56.849	ENSCGRG00000014532	Trnau1ap	98	58.020	Cricetulus_griseus_crigri
ENSORLG00015009858	trnau1ap	100	71.975	ENSCSEG00000006663	trnau1apa	100	73.482	Cynoglossus_semilaevis
ENSORLG00015009858	trnau1ap	99	82.026	ENSCVAG00000018069	trnau1apa	99	84.314	Cyprinodon_variegatus
ENSORLG00015009858	trnau1ap	99	49.032	ENSDARG00000101323	trnau1apa	95	47.742	Danio_rerio
ENSORLG00015009858	trnau1ap	57	59.195	ENSDNOG00000047959	-	90	59.195	Dasypus_novemcinctus
ENSORLG00015009858	trnau1ap	95	56.849	ENSDNOG00000033009	TRNAU1AP	98	58.020	Dasypus_novemcinctus
ENSORLG00015009858	trnau1ap	95	53.448	ENSDORG00000006349	Trnau1ap	97	62.712	Dipodomys_ordii
ENSORLG00015009858	trnau1ap	92	34.891	FBgn0031607	CG15440	50	47.904	Drosophila_melanogaster
ENSORLG00015009858	trnau1ap	81	53.815	ENSETEG00000012594	TRNAU1AP	97	56.800	Echinops_telfairi
ENSORLG00015009858	trnau1ap	61	47.727	ENSEBUG00000006349	-	61	47.727	Eptatretus_burgeri
ENSORLG00015009858	trnau1ap	95	56.849	ENSEASG00005010062	TRNAU1AP	90	67.123	Equus_asinus_asinus
ENSORLG00015009858	trnau1ap	95	56.849	ENSECAG00000012980	TRNAU1AP	90	67.123	Equus_caballus
ENSORLG00015009858	trnau1ap	91	79.545	ENSELUG00000022790	-	93	79.545	Esox_lucius
ENSORLG00015009858	trnau1ap	100	68.710	ENSELUG00000017686	trnau1apa	100	68.489	Esox_lucius
ENSORLG00015009858	trnau1ap	95	56.849	ENSFCAG00000013401	TRNAU1AP	98	58.020	Felis_catus
ENSORLG00015009858	trnau1ap	92	55.872	ENSFALG00000001371	TRNAU1AP	98	58.007	Ficedula_albicollis
ENSORLG00015009858	trnau1ap	95	56.849	ENSFDAG00000018599	TRNAU1AP	98	58.020	Fukomys_damarensis
ENSORLG00015009858	trnau1ap	78	86.122	ENSFHEG00000018232	trnau1apa	82	86.122	Fundulus_heteroclitus
ENSORLG00015009858	trnau1ap	100	60.714	ENSGMOG00000016508	trnau1apa	99	63.107	Gadus_morhua
ENSORLG00015009858	trnau1ap	95	56.164	ENSGALG00000001310	-	98	57.534	Gallus_gallus
ENSORLG00015009858	trnau1ap	70	36.199	ENSGALG00000012721	C2H6orf52	90	36.538	Gallus_gallus
ENSORLG00015009858	trnau1ap	79	89.796	ENSGAFG00000004928	trnau1apa	91	90.417	Gambusia_affinis
ENSORLG00015009858	trnau1ap	100	81.759	ENSGACG00000001443	trnau1apa	100	80.456	Gasterosteus_aculeatus
ENSORLG00015009858	trnau1ap	92	56.584	ENSGAGG00000004940	TRNAU1AP	98	57.651	Gopherus_agassizii
ENSORLG00015009858	trnau1ap	95	56.849	ENSGGOG00000003511	TRNAU1AP	98	58.020	Gorilla_gorilla
ENSORLG00015009858	trnau1ap	100	93.333	ENSHBUG00000002510	trnau1apa	100	81.410	Haplochromis_burtoni
ENSORLG00015009858	trnau1ap	95	56.849	ENSHGLG00000010380	TRNAU1AP	98	58.020	Heterocephalus_glaber_female
ENSORLG00015009858	trnau1ap	95	55.137	ENSHGLG00100012699	TRNAU1AP	98	56.314	Heterocephalus_glaber_male
ENSORLG00015009858	trnau1ap	99	73.955	ENSHCOG00000014770	trnau1apa	99	73.312	Hippocampus_comes
ENSORLG00015009858	trnau1ap	95	56.849	ENSSTOG00000000079	TRNAU1AP	98	58.020	Ictidomys_tridecemlineatus
ENSORLG00015009858	trnau1ap	95	56.849	ENSJJAG00000010128	Trnau1ap	98	58.020	Jaculus_jaculus
ENSORLG00015009858	trnau1ap	100	82.468	ENSKMAG00000001230	trnau1apa	100	84.416	Kryptolebias_marmoratus
ENSORLG00015009858	trnau1ap	100	76.899	ENSLBEG00000011683	trnau1apa	100	77.215	Labrus_bergylta
ENSORLG00015009858	trnau1ap	94	50.694	ENSLACG00000005541	TRNAU1AP	96	51.903	Latimeria_chalumnae
ENSORLG00015009858	trnau1ap	94	58.333	ENSLOCG00000004041	trnau1apa	97	59.375	Lepisosteus_oculatus
ENSORLG00015009858	trnau1ap	95	57.192	ENSLAFG00000007628	TRNAU1AP	98	58.362	Loxodonta_africana
ENSORLG00015009858	trnau1ap	95	69.630	ENSMFAG00000043751	TRNAU1AP	98	57.679	Macaca_fascicularis
ENSORLG00015009858	trnau1ap	95	56.507	ENSMMUG00000006561	TRNAU1AP	98	57.679	Macaca_mulatta
ENSORLG00015009858	trnau1ap	95	69.630	ENSMNEG00000044201	TRNAU1AP	98	57.679	Macaca_nemestrina
ENSORLG00015009858	trnau1ap	95	69.630	ENSMLEG00000015649	TRNAU1AP	98	57.679	Mandrillus_leucophaeus
ENSORLG00015009858	trnau1ap	99	78.846	ENSMAMG00000001247	trnau1apa	100	78.205	Mastacembelus_armatus
ENSORLG00015009858	trnau1ap	100	83.062	ENSMZEG00005017722	trnau1apa	100	83.062	Maylandia_zebra
ENSORLG00015009858	trnau1ap	93	56.140	ENSMGAG00000002105	TRNAU1AP	98	57.895	Meleagris_gallopavo
ENSORLG00015009858	trnau1ap	95	56.849	ENSMICG00000008386	TRNAU1AP	98	58.020	Microcebus_murinus
ENSORLG00015009858	trnau1ap	95	56.849	ENSMOCG00000011189	Trnau1ap	98	58.020	Microtus_ochrogaster
ENSORLG00015009858	trnau1ap	100	68.167	ENSMMOG00000012107	trnau1apa	99	70.096	Mola_mola
ENSORLG00015009858	trnau1ap	95	57.534	ENSMODG00000010927	TRNAU1AP	98	56.997	Monodelphis_domestica
ENSORLG00015009858	trnau1ap	100	79.421	ENSMALG00000016778	trnau1apa	100	78.778	Monopterus_albus
ENSORLG00015009858	trnau1ap	95	56.507	MGP_CAROLIEiJ_G0026563	Trnau1ap	97	67.816	Mus_caroli
ENSORLG00015009858	trnau1ap	95	56.507	ENSMUSG00000028898	Trnau1ap	97	67.816	Mus_musculus
ENSORLG00015009858	trnau1ap	95	56.507	MGP_PahariEiJ_G0028896	Trnau1ap	97	67.816	Mus_pahari
ENSORLG00015009858	trnau1ap	95	56.507	MGP_SPRETEiJ_G0027544	Trnau1ap	97	67.816	Mus_spretus
ENSORLG00015009858	trnau1ap	95	57.192	ENSMPUG00000015511	TRNAU1AP	98	58.362	Mustela_putorius_furo
ENSORLG00015009858	trnau1ap	95	56.849	ENSMLUG00000012586	TRNAU1AP	98	58.020	Myotis_lucifugus
ENSORLG00015009858	trnau1ap	95	56.507	ENSNGAG00000015881	Trnau1ap	98	59.247	Nannospalax_galili
ENSORLG00015009858	trnau1ap	100	69.032	ENSNBRG00000001758	trnau1apa	99	69.032	Neolamprologus_brichardi
ENSORLG00015009858	trnau1ap	95	56.849	ENSNLEG00000009822	TRNAU1AP	98	58.020	Nomascus_leucogenys
ENSORLG00015009858	trnau1ap	93	57.193	ENSMEUG00000006117	TRNAU1AP	98	56.643	Notamacropus_eugenii
ENSORLG00015009858	trnau1ap	54	62.069	ENSOPRG00000007084	-	62	62.069	Ochotona_princeps
ENSORLG00015009858	trnau1ap	95	56.849	ENSODEG00000002970	TRNAU1AP	98	58.020	Octodon_degus
ENSORLG00015009858	trnau1ap	80	85.772	ENSONIG00000004715	trnau1apa	91	87.013	Oreochromis_niloticus
ENSORLG00015009858	trnau1ap	94	44.330	ENSOANG00000005325	-	96	45.139	Ornithorhynchus_anatinus
ENSORLG00015009858	trnau1ap	95	55.479	ENSOCUG00000011704	-	98	56.655	Oryctolagus_cuniculus
ENSORLG00015009858	trnau1ap	95	48.805	ENSOCUG00000002353	-	98	48.123	Oryctolagus_cuniculus
ENSORLG00015009858	trnau1ap	82	49.200	ENSOCUG00000006834	-	88	49.787	Oryctolagus_cuniculus
ENSORLG00015009858	trnau1ap	100	100.000	ENSORLG00000010428	trnau1apa	100	100.000	Oryzias_latipes
ENSORLG00015009858	trnau1ap	100	100.000	ENSORLG00020000926	trnau1ap	100	100.000	Oryzias_latipes_hni
ENSORLG00015009858	trnau1ap	100	96.066	ENSOMEG00000007873	trnau1apa	100	96.066	Oryzias_melastigma
ENSORLG00015009858	trnau1ap	95	56.849	ENSOGAG00000002274	TRNAU1AP	98	58.020	Otolemur_garnettii
ENSORLG00015009858	trnau1ap	95	56.849	ENSOARG00000002843	TRNAU1AP	98	58.020	Ovis_aries
ENSORLG00015009858	trnau1ap	95	56.849	ENSPPAG00000033927	TRNAU1AP	98	58.020	Pan_paniscus
ENSORLG00015009858	trnau1ap	95	56.849	ENSPPRG00000004416	TRNAU1AP	98	58.020	Panthera_pardus
ENSORLG00015009858	trnau1ap	95	56.849	ENSPTIG00000016677	TRNAU1AP	98	58.020	Panthera_tigris_altaica
ENSORLG00015009858	trnau1ap	88	49.814	ENSPTRG00000000434	-	93	50.929	Pan_troglodytes
ENSORLG00015009858	trnau1ap	95	56.507	ENSPANG00000016019	TRNAU1AP	98	57.679	Papio_anubis
ENSORLG00015009858	trnau1ap	92	79.545	ENSPKIG00000022205	-	95	79.545	Paramormyrops_kingsleyae
ENSORLG00015009858	trnau1ap	97	56.811	ENSPKIG00000015511	trnau1apa	96	56.146	Paramormyrops_kingsleyae
ENSORLG00015009858	trnau1ap	92	57.394	ENSPSIG00000006864	TRNAU1AP	98	58.099	Pelodiscus_sinensis
ENSORLG00015009858	trnau1ap	97	68.000	ENSPMGG00000023893	trnau1apa	98	66.775	Periophthalmus_magnuspinnatus
ENSORLG00015009858	trnau1ap	95	56.507	ENSPEMG00000007877	Trnau1ap	98	57.679	Peromyscus_maniculatus_bairdii
ENSORLG00015009858	trnau1ap	55	53.757	ENSPMAG00000000592	trnau1apa	95	53.757	Petromyzon_marinus
ENSORLG00015009858	trnau1ap	74	54.867	ENSPMAG00000005934	trnau1apa	96	54.867	Petromyzon_marinus
ENSORLG00015009858	trnau1ap	99	82.353	ENSPFOG00000008100	trnau1apa	99	82.353	Poecilia_formosa
ENSORLG00015009858	trnau1ap	95	82.313	ENSPLAG00000010236	trnau1apa	99	82.313	Poecilia_latipinna
ENSORLG00015009858	trnau1ap	99	80.328	ENSPMEG00000016387	trnau1apa	97	80.328	Poecilia_mexicana
ENSORLG00015009858	trnau1ap	88	85.870	ENSPREG00000019821	trnau1apa	98	85.870	Poecilia_reticulata
ENSORLG00015009858	trnau1ap	86	48.679	ENSPPYG00000001639	-	98	50.000	Pongo_abelii
ENSORLG00015009858	trnau1ap	94	45.486	ENSPCOG00000023470	-	98	46.713	Propithecus_coquereli
ENSORLG00015009858	trnau1ap	95	56.849	ENSPCOG00000027712	-	98	58.020	Propithecus_coquereli
ENSORLG00015009858	trnau1ap	95	56.849	ENSPVAG00000017214	TRNAU1AP	98	58.020	Pteropus_vampyrus
ENSORLG00015009858	trnau1ap	100	82.222	ENSPNYG00000010130	trnau1apa	100	81.731	Pundamilia_nyererei
ENSORLG00015009858	trnau1ap	99	51.125	ENSPNAG00000024905	trnau1apa	97	50.162	Pygocentrus_nattereri
ENSORLG00015009858	trnau1ap	82	58.000	ENSRNOG00000055344	Trnau1ap	77	62.288	Rattus_norvegicus
ENSORLG00015009858	trnau1ap	95	56.849	ENSRBIG00000029083	TRNAU1AP	98	58.020	Rhinopithecus_bieti
ENSORLG00015009858	trnau1ap	95	56.849	ENSRROG00000029128	TRNAU1AP	98	58.020	Rhinopithecus_roxellana
ENSORLG00015009858	trnau1ap	95	56.849	ENSSBOG00000021299	TRNAU1AP	98	58.020	Saimiri_boliviensis_boliviensis
ENSORLG00015009858	trnau1ap	95	57.192	ENSSHAG00000008108	TRNAU1AP	98	56.655	Sarcophilus_harrisii
ENSORLG00015009858	trnau1ap	100	77.492	ENSSMAG00000020851	trnau1apa	100	78.457	Scophthalmus_maximus
ENSORLG00015009858	trnau1ap	100	81.410	ENSSDUG00000011734	trnau1apa	100	82.051	Seriola_dumerili
ENSORLG00015009858	trnau1ap	100	66.450	ENSSLDG00000012101	trnau1apa	99	66.124	Seriola_lalandi_dorsalis
ENSORLG00015009858	trnau1ap	93	56.842	ENSSARG00000007536	TRNAU1AP	98	58.042	Sorex_araneus
ENSORLG00015009858	trnau1ap	63	50.521	ENSSPUG00000010415	-	99	48.438	Sphenodon_punctatus
ENSORLG00015009858	trnau1ap	95	53.512	ENSSPUG00000010400	-	99	54.667	Sphenodon_punctatus
ENSORLG00015009858	trnau1ap	100	81.759	ENSSPAG00000005029	trnau1apa	100	82.085	Stegastes_partitus
ENSORLG00015009858	trnau1ap	95	56.849	ENSSSCG00000030284	TRNAU1AP	98	58.020	Sus_scrofa
ENSORLG00015009858	trnau1ap	70	38.208	ENSTGUG00000005908	-	100	40.094	Taeniopygia_guttata
ENSORLG00015009858	trnau1ap	93	56.491	ENSTGUG00000000735	-	98	57.895	Taeniopygia_guttata
ENSORLG00015009858	trnau1ap	100	78.247	ENSTRUG00000003352	trnau1apa	100	77.273	Takifugu_rubripes
ENSORLG00015009858	trnau1ap	100	75.806	ENSTNIG00000006129	trnau1apa	100	75.484	Tetraodon_nigroviridis
ENSORLG00015009858	trnau1ap	81	52.227	ENSTBEG00000008049	-	96	51.822	Tupaia_belangeri
ENSORLG00015009858	trnau1ap	95	56.849	ENSTTRG00000001854	TRNAU1AP	98	58.020	Tursiops_truncatus
ENSORLG00015009858	trnau1ap	92	56.940	ENSUAMG00000008789	TRNAU1AP	98	58.156	Ursus_americanus
ENSORLG00015009858	trnau1ap	95	56.849	ENSUMAG00000011068	TRNAU1AP	98	58.020	Ursus_maritimus
ENSORLG00015009858	trnau1ap	96	49.342	ENSVPAG00000006778	TRNAU1AP	98	50.492	Vicugna_pacos
ENSORLG00015009858	trnau1ap	95	56.207	ENSVVUG00000012518	TRNAU1AP	91	57.388	Vulpes_vulpes
ENSORLG00015009858	trnau1ap	99	83.007	ENSXMAG00000017361	trnau1apa	99	83.007	Xiphophorus_maculatus