EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015009860 (Gene tree)
Gene ID: -
Gene Symbol: sharpin
Alias: -
Full Name: SHANK-associated RH domain interacting protein
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 6181 bases
Position: chr17:27639105-27645285
Accession: ZDB-GENE-101223-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015009066	zf-RanBP	PF00641.18	2.6e-06	1	1
ENSORLP00015009061	zf-RanBP	PF00641.18	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015015239	-	1816	-	ENSORLP00015009061	475 (aa)	-	-
ENSORLT00015015270	-	1690	-	ENSORLP00015009066	433 (aa)	-	-

Gene Model

Click here to download ENSORLG00015009860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015009860	sharpin	95	55.682	ENSORLG00015018865	shrprbck1r	59	55.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009860	sharpin	95	56.208	ENSAPOG00000022737	shrprbck1r	60	56.208	Acanthochromis_polyacanthus
ENSORLG00015009860	sharpin	100	85.616	ENSAPOG00000023352	sharpin	100	85.616	Acanthochromis_polyacanthus
ENSORLG00015009860	sharpin	95	56.909	ENSACIG00000002184	shrprbck1r	88	54.801	Amphilophus_citrinellus
ENSORLG00015009860	sharpin	95	56.689	ENSAOCG00000002890	shrprbck1r	60	56.689	Amphiprion_ocellaris
ENSORLG00015009860	sharpin	100	85.845	ENSAOCG00000017464	sharpin	100	85.845	Amphiprion_ocellaris
ENSORLG00015009860	sharpin	100	86.073	ENSAPEG00000004049	sharpin	100	86.073	Amphiprion_percula
ENSORLG00015009860	sharpin	95	55.632	ENSAPEG00000023274	shrprbck1r	59	55.632	Amphiprion_percula
ENSORLG00015009860	sharpin	96	85.442	ENSATEG00000007832	sharpin	88	85.442	Anabas_testudineus
ENSORLG00015009860	sharpin	95	55.760	ENSATEG00000014561	shrprbck1r	59	56.221	Anabas_testudineus
ENSORLG00015009860	sharpin	62	87.879	ENSACLG00000020160	-	86	87.879	Astatotilapia_calliptera
ENSORLG00015009860	sharpin	95	55.916	ENSACLG00000022609	shrprbck1r	60	56.381	Astatotilapia_calliptera
ENSORLG00015009860	sharpin	87	56.853	ENSAMXG00000006229	sharpin	97	55.838	Astyanax_mexicanus
ENSORLG00015009860	sharpin	95	57.399	ENSAMXG00000021016	shrprbck1r	66	56.951	Astyanax_mexicanus
ENSORLG00015009860	sharpin	95	50.701	ENSCSEG00000011306	shrprbck1r	59	51.869	Cynoglossus_semilaevis
ENSORLG00015009860	sharpin	100	77.523	ENSCVAG00000006586	sharpin	100	77.523	Cyprinodon_variegatus
ENSORLG00015009860	sharpin	95	54.098	ENSCVAG00000007250	shrprbck1r	60	54.098	Cyprinodon_variegatus
ENSORLG00015009860	sharpin	95	56.787	ENSDARG00000059871	shrprbck1r	90	58.065	Danio_rerio
ENSORLG00015009860	sharpin	91	53.528	ENSDARG00000076995	sharpin	98	53.528	Danio_rerio
ENSORLG00015009860	sharpin	95	60.377	ENSELUG00000016022	shrprbck1r	59	60.377	Esox_lucius
ENSORLG00015009860	sharpin	100	79.128	ENSFHEG00000013564	sharpin	99	79.128	Fundulus_heteroclitus
ENSORLG00015009860	sharpin	84	75.229	ENSGMOG00000010123	sharpin	94	75.229	Gadus_morhua
ENSORLG00015009860	sharpin	95	53.613	ENSGAFG00000009309	shrprbck1r	59	53.613	Gambusia_affinis
ENSORLG00015009860	sharpin	96	58.513	ENSGAFG00000021405	sharpin	97	61.143	Gambusia_affinis
ENSORLG00015009860	sharpin	95	56.381	ENSHBUG00000021933	shrprbck1r	60	56.381	Haplochromis_burtoni
ENSORLG00015009860	sharpin	95	71.117	ENSHCOG00000018847	sharpin	80	71.359	Hippocampus_comes
ENSORLG00015009860	sharpin	88	55.919	ENSIPUG00000014247	shrprbck1r	58	54.265	Ictalurus_punctatus
ENSORLG00015009860	sharpin	77	80.000	ENSIPUG00000011951	sharpin	98	80.000	Ictalurus_punctatus
ENSORLG00015009860	sharpin	95	54.751	ENSKMAG00000015215	shrprbck1r	60	55.204	Kryptolebias_marmoratus
ENSORLG00015009860	sharpin	96	78.169	ENSKMAG00000015204	sharpin	75	86.111	Kryptolebias_marmoratus
ENSORLG00015009860	sharpin	100	85.388	ENSLBEG00000016624	sharpin	99	85.388	Labrus_bergylta
ENSORLG00015009860	sharpin	95	55.220	ENSLBEG00000016876	shrprbck1r	60	56.381	Labrus_bergylta
ENSORLG00015009860	sharpin	86	47.487	ENSLACG00000010948	-	59	45.602	Latimeria_chalumnae
ENSORLG00015009860	sharpin	94	62.322	ENSLOCG00000008910	shrprbck1r	59	61.827	Lepisosteus_oculatus
ENSORLG00015009860	sharpin	95	54.333	ENSMAMG00000022930	shrprbck1r	60	54.460	Mastacembelus_armatus
ENSORLG00015009860	sharpin	82	96.552	ENSMAMG00000014645	sharpin	94	96.552	Mastacembelus_armatus
ENSORLG00015009860	sharpin	95	55.684	ENSMZEG00005021257	shrprbck1r	60	56.381	Maylandia_zebra
ENSORLG00015009860	sharpin	76	85.393	ENSMMOG00000016788	sharpin	92	85.393	Mola_mola
ENSORLG00015009860	sharpin	95	53.881	ENSMMOG00000003764	shrprbck1r	59	54.018	Mola_mola
ENSORLG00015009860	sharpin	82	96.552	ENSMALG00000020528	sharpin	95	96.552	Monopterus_albus
ENSORLG00015009860	sharpin	88	58.040	ENSMALG00000008861	shrprbck1r	55	58.040	Monopterus_albus
ENSORLG00015009860	sharpin	60	88.571	ENSNBRG00000012382	sharpin	94	88.571	Neolamprologus_brichardi
ENSORLG00015009860	sharpin	95	55.220	ENSNBRG00000002270	shrprbck1r	60	55.916	Neolamprologus_brichardi
ENSORLG00015009860	sharpin	95	56.075	ENSONIG00000014401	shrprbck1r	60	56.776	Oreochromis_niloticus
ENSORLG00015009860	sharpin	90	73.710	ENSONIG00000009626	-	99	79.532	Oreochromis_niloticus
ENSORLG00015009860	sharpin	100	99.078	ENSORLG00000017281	sharpin	100	99.078	Oryzias_latipes
ENSORLG00015009860	sharpin	95	55.809	ENSORLG00000007392	shrprbck1r	60	55.809	Oryzias_latipes
ENSORLG00015009860	sharpin	100	98.845	ENSORLG00020000801	sharpin	100	98.845	Oryzias_latipes_hni
ENSORLG00015009860	sharpin	95	56.036	ENSORLG00020018619	shrprbck1r	60	56.036	Oryzias_latipes_hni
ENSORLG00015009860	sharpin	95	55.936	ENSOMEG00000012749	shrprbck1r	60	55.936	Oryzias_melastigma
ENSORLG00015009860	sharpin	77	88.571	ENSOMEG00000005729	sharpin	91	88.571	Oryzias_melastigma
ENSORLG00015009860	sharpin	95	63.033	ENSPKIG00000006933	shrprbck1r	59	63.033	Paramormyrops_kingsleyae
ENSORLG00015009860	sharpin	95	60.284	ENSPKIG00000018308	-	88	60.520	Paramormyrops_kingsleyae
ENSORLG00015009860	sharpin	95	54.374	ENSPMGG00000013254	shrprbck1r	59	54.374	Periophthalmus_magnuspinnatus
ENSORLG00015009860	sharpin	73	77.108	ENSPMGG00000019318	sharpin	94	88.667	Periophthalmus_magnuspinnatus
ENSORLG00015009860	sharpin	100	78.440	ENSPFOG00000015253	sharpin	100	78.440	Poecilia_formosa
ENSORLG00015009860	sharpin	95	53.917	ENSPFOG00000004214	shrprbck1r	89	53.917	Poecilia_formosa
ENSORLG00015009860	sharpin	100	78.670	ENSPLAG00000000423	sharpin	100	78.670	Poecilia_latipinna
ENSORLG00015009860	sharpin	95	53.917	ENSPLAG00000020523	shrprbck1r	59	53.917	Poecilia_latipinna
ENSORLG00015009860	sharpin	96	54.676	ENSPMEG00000023030	sharpin	85	68.421	Poecilia_mexicana
ENSORLG00015009860	sharpin	95	54.861	ENSPMEG00000006877	shrprbck1r	59	54.861	Poecilia_mexicana
ENSORLG00015009860	sharpin	100	78.032	ENSPREG00000009702	sharpin	100	78.032	Poecilia_reticulata
ENSORLG00015009860	sharpin	95	52.535	ENSPREG00000014689	shrprbck1r	59	52.535	Poecilia_reticulata
ENSORLG00015009860	sharpin	95	55.684	ENSPNYG00000022601	shrprbck1r	60	56.381	Pundamilia_nyererei
ENSORLG00015009860	sharpin	87	53.886	ENSPNAG00000002911	sharpin	99	52.850	Pygocentrus_nattereri
ENSORLG00015009860	sharpin	95	57.978	ENSPNAG00000007847	shrprbck1r	60	58.730	Pygocentrus_nattereri
ENSORLG00015009860	sharpin	95	53.304	ENSSFOG00015004028	sharpin	93	58.696	Scleropages_formosus
ENSORLG00015009860	sharpin	95	56.193	ENSSMAG00000018085	shrprbck1r	60	57.110	Scophthalmus_maximus
ENSORLG00015009860	sharpin	95	55.708	ENSSDUG00000002959	shrprbck1r	59	56.849	Seriola_dumerili
ENSORLG00015009860	sharpin	95	62.470	ENSSDUG00000019039	sharpin	95	66.667	Seriola_dumerili
ENSORLG00015009860	sharpin	95	55.329	ENSSLDG00000009026	shrprbck1r	60	56.463	Seriola_lalandi_dorsalis
ENSORLG00015009860	sharpin	95	56.152	ENSSPAG00000016097	shrprbck1r	61	56.152	Stegastes_partitus
ENSORLG00015009860	sharpin	61	91.429	ENSSPAG00000021807	sharpin	92	91.892	Stegastes_partitus
ENSORLG00015009860	sharpin	95	68.281	ENSTRUG00000011046	sharpin	96	74.138	Takifugu_rubripes
ENSORLG00015009860	sharpin	95	53.226	ENSTRUG00000006949	shrprbck1r	58	53.917	Takifugu_rubripes
ENSORLG00015009860	sharpin	91	71.535	ENSTNIG00000008521	sharpin	99	77.910	Tetraodon_nigroviridis
ENSORLG00015009860	sharpin	80	83.721	ENSXCOG00000015019	sharpin	99	83.721	Xiphophorus_couchianus
ENSORLG00015009860	sharpin	95	52.900	ENSXCOG00000006701	shrprbck1r	58	52.900	Xiphophorus_couchianus
ENSORLG00015009860	sharpin	95	52.204	ENSXMAG00000018972	shrprbck1r	58	52.204	Xiphophorus_maculatus
ENSORLG00015009860	sharpin	100	78.032	ENSXMAG00000022076	sharpin	100	78.032	Xiphophorus_maculatus