EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015009952 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 9769 bases
Position: chr2:8640487-8650255
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015009082	MBD	PF01429.19	5.2e-09	1	1
ENSORLP00015009091	MBD	PF01429.19	5.2e-09	1	1
ENSORLP00015027663	MBD	PF01429.19	5.2e-09	1	1
ENSORLP00015027707	MBD	PF01429.19	8.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015015275	-	2834	-	ENSORLP00015009082	624 (aa)	-	-
ENSORLT00015031249	-	1749	-	ENSORLP00015027707	582 (aa)	-	-
ENSORLT00015015293	-	2939	-	ENSORLP00015009091	624 (aa)	-	-
ENSORLT00015015257	-	1875	-	ENSORLP00015027663	624 (aa)	-	-

Gene Model

Click here to download ENSORLG00015009952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015009952's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015009952	-	77	52.500	ENSG00000136169	SETDB2	67	52.273	Homo_sapiens
ENSORLG00015009952	-	73	58.182	ENSAPOG00000020220	-	98	58.182	Acanthochromis_polyacanthus
ENSORLG00015009952	-	94	58.844	ENSACIG00000009349	-	93	58.503	Amphilophus_citrinellus
ENSORLG00015009952	-	98	64.032	ENSAOCG00000006560	-	98	64.516	Amphiprion_ocellaris
ENSORLG00015009952	-	97	51.618	ENSAPEG00000009529	-	98	51.618	Amphiprion_percula
ENSORLG00015009952	-	94	56.694	ENSATEG00000008915	-	99	56.230	Anabas_testudineus
ENSORLG00015009952	-	96	33.430	ENSAPLG00000009061	SETDB2	99	33.432	Anas_platyrhynchos
ENSORLG00015009952	-	73	65.517	ENSACAG00000014036	SETDB2	64	65.517	Anolis_carolinensis
ENSORLG00015009952	-	58	53.409	ENSANAG00000028107	SETDB2	55	53.409	Aotus_nancymaae
ENSORLG00015009952	-	98	63.924	ENSACLG00000004046	-	98	63.766	Astatotilapia_calliptera
ENSORLG00015009952	-	97	40.351	ENSAMXG00000016092	setdb2	100	40.205	Astyanax_mexicanus
ENSORLG00015009952	-	76	53.409	ENSBTAG00000007329	SETDB2	67	53.409	Bos_taurus
ENSORLG00015009952	-	77	53.750	ENSCJAG00000008864	SETDB2	67	53.409	Callithrix_jacchus
ENSORLG00015009952	-	73	63.934	ENSCAFG00000004341	SETDB2	64	63.934	Canis_familiaris
ENSORLG00015009952	-	73	63.934	ENSCAFG00020020283	SETDB2	63	63.934	Canis_lupus_dingo
ENSORLG00015009952	-	76	53.409	ENSCHIG00000014895	SETDB2	67	53.409	Capra_hircus
ENSORLG00015009952	-	76	50.000	ENSTSYG00000014051	SETDB2	67	50.000	Carlito_syrichta
ENSORLG00015009952	-	62	34.307	ENSCAPG00000014168	-	85	34.804	Cavia_aperea
ENSORLG00015009952	-	62	35.468	ENSCPOG00000002194	SETDB2	58	35.194	Cavia_porcellus
ENSORLG00015009952	-	77	53.750	ENSCCAG00000031604	SETDB2	67	53.409	Cebus_capucinus
ENSORLG00015009952	-	77	52.500	ENSCATG00000002055	SETDB2	68	52.273	Cercocebus_atys
ENSORLG00015009952	-	76	54.444	ENSCLAG00000007348	SETDB2	67	54.444	Chinchilla_lanigera
ENSORLG00015009952	-	77	52.500	ENSCSAG00000017713	SETDB2	67	52.273	Chlorocebus_sabaeus
ENSORLG00015009952	-	73	33.404	ENSCPBG00000008524	SETDB2	61	34.774	Chrysemys_picta_bellii
ENSORLG00015009952	-	62	34.772	ENSCANG00000033506	SETDB2	57	33.813	Colobus_angolensis_palliatus
ENSORLG00015009952	-	74	69.355	ENSCGRG00001011194	Setdb2	64	69.355	Cricetulus_griseus_chok1gshd
ENSORLG00015009952	-	74	69.355	ENSCGRG00000000801	Setdb2	64	69.355	Cricetulus_griseus_crigri
ENSORLG00015009952	-	97	61.047	ENSCVAG00000004116	-	97	61.438	Cyprinodon_variegatus
ENSORLG00015009952	-	64	70.000	ENSDARG00000101462	setdb2	66	70.000	Danio_rerio
ENSORLG00015009952	-	83	41.739	ENSDNOG00000033679	SETDB2	70	44.248	Dasypus_novemcinctus
ENSORLG00015009952	-	78	66.667	ENSDORG00000026163	Setdb2	71	66.667	Dipodomys_ordii
ENSORLG00015009952	-	66	53.409	ENSETEG00000004821	SETDB2	59	53.409	Echinops_telfairi
ENSORLG00015009952	-	76	53.409	ENSEASG00005017285	SETDB2	67	53.409	Equus_asinus_asinus
ENSORLG00015009952	-	76	53.409	ENSECAG00000020357	SETDB2	67	53.409	Equus_caballus
ENSORLG00015009952	-	93	53.933	ENSEEUG00000011247	SETDB2	88	53.933	Erinaceus_europaeus
ENSORLG00015009952	-	96	47.376	ENSELUG00000024242	-	96	47.235	Esox_lucius
ENSORLG00015009952	-	73	63.934	ENSFCAG00000012034	SETDB2	63	63.934	Felis_catus
ENSORLG00015009952	-	96	51.064	ENSFALG00000008379	SETDB2	88	51.064	Ficedula_albicollis
ENSORLG00015009952	-	76	55.294	ENSFDAG00000017408	SETDB2	68	55.294	Fukomys_damarensis
ENSORLG00015009952	-	76	54.430	ENSGALG00000017006	SETDB2	64	54.430	Gallus_gallus
ENSORLG00015009952	-	99	60.413	ENSGAFG00000000077	-	98	60.413	Gambusia_affinis
ENSORLG00015009952	-	97	53.871	ENSGACG00000015463	-	96	55.749	Gasterosteus_aculeatus
ENSORLG00015009952	-	86	62.903	ENSGAGG00000014099	SETDB2	71	58.571	Gopherus_agassizii
ENSORLG00015009952	-	77	52.500	ENSGGOG00000016016	SETDB2	68	52.273	Gorilla_gorilla
ENSORLG00015009952	-	98	63.766	ENSHBUG00000001477	-	98	63.608	Haplochromis_burtoni
ENSORLG00015009952	-	74	65.574	ENSHGLG00000003820	SETDB2	67	54.545	Heterocephalus_glaber_female
ENSORLG00015009952	-	74	65.574	ENSHGLG00100008642	SETDB2	64	65.574	Heterocephalus_glaber_male
ENSORLG00015009952	-	95	50.577	ENSHCOG00000007071	-	94	50.741	Hippocampus_comes
ENSORLG00015009952	-	96	41.431	ENSIPUG00000011157	setdb2	99	40.686	Ictalurus_punctatus
ENSORLG00015009952	-	76	63.934	ENSSTOG00000002985	SETDB2	64	63.934	Ictidomys_tridecemlineatus
ENSORLG00015009952	-	83	66.129	ENSJJAG00000011079	Setdb2	73	66.129	Jaculus_jaculus
ENSORLG00015009952	-	96	65.008	ENSKMAG00000012100	-	97	64.115	Kryptolebias_marmoratus
ENSORLG00015009952	-	92	46.715	ENSLACG00000009640	SETDB2	81	46.715	Latimeria_chalumnae
ENSORLG00015009952	-	93	48.182	ENSLOCG00000009739	-	89	48.182	Lepisosteus_oculatus
ENSORLG00015009952	-	74	65.574	ENSLAFG00000012612	SETDB2	65	65.574	Loxodonta_africana
ENSORLG00015009952	-	77	52.500	ENSMFAG00000032631	SETDB2	67	52.273	Macaca_fascicularis
ENSORLG00015009952	-	77	52.500	ENSMMUG00000013473	SETDB2	68	52.273	Macaca_mulatta
ENSORLG00015009952	-	77	52.500	ENSMNEG00000037148	SETDB2	67	52.273	Macaca_nemestrina
ENSORLG00015009952	-	77	52.500	ENSMLEG00000043613	SETDB2	67	52.273	Mandrillus_leucophaeus
ENSORLG00015009952	-	99	59.754	ENSMAMG00000022781	-	99	59.601	Mastacembelus_armatus
ENSORLG00015009952	-	98	63.924	ENSMZEG00005012098	-	98	63.766	Maylandia_zebra
ENSORLG00015009952	-	91	55.696	ENSMGAG00000015017	SETDB2	78	55.696	Meleagris_gallopavo
ENSORLG00015009952	-	86	55.056	ENSMAUG00000012871	Setdb2	75	55.056	Mesocricetus_auratus
ENSORLG00015009952	-	78	53.165	ENSMICG00000012641	SETDB2	67	53.165	Microcebus_murinus
ENSORLG00015009952	-	74	67.742	ENSMOCG00000021987	Setdb2	64	67.742	Microtus_ochrogaster
ENSORLG00015009952	-	61	69.512	ENSMMOG00000013334	-	84	69.512	Mola_mola
ENSORLG00015009952	-	93	55.294	ENSMODG00000010929	SETDB2	79	55.294	Monodelphis_domestica
ENSORLG00015009952	-	97	60.283	ENSMALG00000001256	-	96	59.591	Monopterus_albus
ENSORLG00015009952	-	78	53.933	MGP_CAROLIEiJ_G0019367	Setdb2	69	53.933	Mus_caroli
ENSORLG00015009952	-	78	53.933	ENSMUSG00000071350	Setdb2	69	53.933	Mus_musculus
ENSORLG00015009952	-	78	52.809	MGP_PahariEiJ_G0030385	Setdb2	69	52.809	Mus_pahari
ENSORLG00015009952	-	78	53.933	MGP_SPRETEiJ_G0020259	Setdb2	69	53.933	Mus_spretus
ENSORLG00015009952	-	73	65.517	ENSMPUG00000018019	SETDB2	63	65.517	Mustela_putorius_furo
ENSORLG00015009952	-	75	62.319	ENSMLUG00000004378	SETDB2	65	62.319	Myotis_lucifugus
ENSORLG00015009952	-	74	66.129	ENSNGAG00000013911	Setdb2	65	66.129	Nannospalax_galili
ENSORLG00015009952	-	82	55.145	ENSNBRG00000022486	-	84	68.605	Neolamprologus_brichardi
ENSORLG00015009952	-	77	52.500	ENSNLEG00000003613	SETDB2	67	52.273	Nomascus_leucogenys
ENSORLG00015009952	-	65	54.118	ENSMEUG00000005220	-	54	53.933	Notamacropus_eugenii
ENSORLG00015009952	-	66	62.903	ENSOPRG00000012261	SETDB2	57	62.903	Ochotona_princeps
ENSORLG00015009952	-	95	61.301	ENSONIG00000009000	-	100	60.968	Oreochromis_niloticus
ENSORLG00015009952	-	78	56.044	ENSOANG00000015546	SETDB2	65	56.044	Ornithorhynchus_anatinus
ENSORLG00015009952	-	77	54.321	ENSOCUG00000003755	SETDB2	67	54.321	Oryctolagus_cuniculus
ENSORLG00015009952	-	100	97.129	ENSORLG00000001147	-	100	97.129	Oryzias_latipes
ENSORLG00015009952	-	99	96.810	ENSORLG00020006680	-	99	96.810	Oryzias_latipes_hni
ENSORLG00015009952	-	76	53.409	ENSOGAG00000005339	SETDB2	68	53.409	Otolemur_garnettii
ENSORLG00015009952	-	76	53.409	ENSOARG00000008487	SETDB2	67	53.409	Ovis_aries
ENSORLG00015009952	-	77	52.500	ENSPPAG00000039854	SETDB2	68	52.273	Pan_paniscus
ENSORLG00015009952	-	73	63.934	ENSPPRG00000000069	SETDB2	63	63.934	Panthera_pardus
ENSORLG00015009952	-	73	63.934	ENSPTIG00000006314	SETDB2	63	63.934	Panthera_tigris_altaica
ENSORLG00015009952	-	77	52.500	ENSPTRG00000005873	SETDB2	68	52.273	Pan_troglodytes
ENSORLG00015009952	-	77	52.500	ENSPANG00000017051	SETDB2	67	52.273	Papio_anubis
ENSORLG00015009952	-	96	41.654	ENSPKIG00000009795	-	99	41.731	Paramormyrops_kingsleyae
ENSORLG00015009952	-	87	55.405	ENSPSIG00000002200	SETDB2	70	55.405	Pelodiscus_sinensis
ENSORLG00015009952	-	80	54.762	ENSPCIG00000002912	SETDB2	78	54.545	Phascolarctos_cinereus
ENSORLG00015009952	-	99	60.000	ENSPFOG00000006673	-	98	60.450	Poecilia_formosa
ENSORLG00015009952	-	99	60.543	ENSPLAG00000016914	-	98	60.995	Poecilia_latipinna
ENSORLG00015009952	-	99	60.543	ENSPMEG00000003842	-	98	60.995	Poecilia_mexicana
ENSORLG00015009952	-	99	59.040	ENSPREG00000022531	-	98	59.646	Poecilia_reticulata
ENSORLG00015009952	-	73	65.517	ENSPPYG00000005368	SETDB2	63	65.517	Pongo_abelii
ENSORLG00015009952	-	60	58.667	ENSPCOG00000017644	SETDB2	72	53.191	Propithecus_coquereli
ENSORLG00015009952	-	70	53.409	ENSPVAG00000006911	SETDB2	61	53.409	Pteropus_vampyrus
ENSORLG00015009952	-	78	68.384	ENSPNYG00000023676	-	89	68.384	Pundamilia_nyererei
ENSORLG00015009952	-	96	40.862	ENSPNAG00000011459	setdb2	99	40.916	Pygocentrus_nattereri
ENSORLG00015009952	-	83	48.182	ENSRNOG00000021680	Setdb2	69	51.685	Rattus_norvegicus
ENSORLG00015009952	-	77	52.500	ENSRBIG00000006562	SETDB2	67	52.273	Rhinopithecus_bieti
ENSORLG00015009952	-	77	52.500	ENSRROG00000032499	SETDB2	68	52.273	Rhinopithecus_roxellana
ENSORLG00015009952	-	77	54.321	ENSSBOG00000023249	SETDB2	67	53.933	Saimiri_boliviensis_boliviensis
ENSORLG00015009952	-	95	55.056	ENSSHAG00000007281	SETDB2	91	55.056	Sarcophilus_harrisii
ENSORLG00015009952	-	96	37.429	ENSSFOG00015008204	-	78	42.134	Scleropages_formosus
ENSORLG00015009952	-	76	62.346	ENSSMAG00000000035	-	96	62.346	Scophthalmus_maximus
ENSORLG00015009952	-	98	61.669	ENSSDUG00000002987	-	97	62.133	Seriola_dumerili
ENSORLG00015009952	-	98	59.817	ENSSLDG00000015081	-	97	61.339	Seriola_lalandi_dorsalis
ENSORLG00015009952	-	82	63.793	ENSSARG00000009926	SETDB2	72	63.793	Sorex_araneus
ENSORLG00015009952	-	91	65.803	ENSSPAG00000006869	-	100	65.630	Stegastes_partitus
ENSORLG00015009952	-	73	67.241	ENSSSCG00000009395	SETDB2	64	67.241	Sus_scrofa
ENSORLG00015009952	-	61	33.747	ENSTGUG00000012159	SETDB2	94	35.714	Taeniopygia_guttata
ENSORLG00015009952	-	58	71.795	ENSTBEG00000008013	SETDB2	52	71.795	Tupaia_belangeri
ENSORLG00015009952	-	74	53.409	ENSTTRG00000012932	SETDB2	66	53.409	Tursiops_truncatus
ENSORLG00015009952	-	73	65.517	ENSUMAG00000018406	SETDB2	63	65.517	Ursus_maritimus
ENSORLG00015009952	-	76	54.545	ENSVPAG00000012019	SETDB2	67	54.545	Vicugna_pacos
ENSORLG00015009952	-	67	32.189	ENSVVUG00000028174	SETDB2	53	35.054	Vulpes_vulpes
ENSORLG00015009952	-	78	55.172	ENSXETG00000015666	setdb2	69	55.056	Xenopus_tropicalis
ENSORLG00015009952	-	98	56.452	ENSXMAG00000006323	-	96	56.515	Xiphophorus_maculatus