EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015010098 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171927
Alias: -
Full Name: zgc:171927
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 5631 bases
Position: chr13:2390636-2396266
Accession: ZDB-GENE-070822-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015009312	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015015565	-	1998	-	ENSORLP00015009312	213 (aa)	-	-

Gene Model

Click here to download ENSORLG00015010098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015010098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015010098	zgc:171927	77	45.122	ENSORLG00015013564	-	82	45.062
ENSORLG00015010098	zgc:171927	99	44.076	ENSORLG00015020173	rab11bb	96	44.076
ENSORLG00015010098	zgc:171927	85	44.444	ENSORLG00015016047	zgc:101559	85	44.444
ENSORLG00015010098	zgc:171927	86	37.755	ENSORLG00015015327	rab33a	61	41.176
ENSORLG00015010098	zgc:171927	72	33.548	ENSORLG00015001298	rhebl1	83	33.548
ENSORLG00015010098	zgc:171927	55	31.933	ENSORLG00015018698	-	61	31.933
ENSORLG00015010098	zgc:171927	75	39.264	ENSORLG00015006820	-	79	39.264
ENSORLG00015010098	zgc:171927	98	41.148	ENSORLG00015019569	rab25b	98	40.887
ENSORLG00015010098	zgc:171927	97	40.097	ENSORLG00015000893	-	93	40.097
ENSORLG00015010098	zgc:171927	75	41.228	ENSORLG00015002344	-	79	39.264
ENSORLG00015010098	zgc:171927	76	48.765	ENSORLG00015007182	rab18b	79	48.765
ENSORLG00015010098	zgc:171927	55	30.833	ENSORLG00015017167	arl4aa	61	30.833
ENSORLG00015010098	zgc:171927	98	41.038	ENSORLG00015006881	rab14	96	41.038
ENSORLG00015010098	zgc:171927	98	40.476	ENSORLG00015012725	rab25a	67	40.476
ENSORLG00015010098	zgc:171927	82	41.243	ENSORLG00015022289	-	83	41.243
ENSORLG00015010098	zgc:171927	76	44.099	ENSORLG00015021900	rab5c	79	42.529
ENSORLG00015010098	zgc:171927	55	30.508	ENSORLG00015018436	arl8bb	61	30.508
ENSORLG00015010098	zgc:171927	78	32.143	ENSORLG00015006780	-	91	32.143
ENSORLG00015010098	zgc:171927	96	35.238	ENSORLG00015000584	rab34b	73	35.238
ENSORLG00015010098	zgc:171927	84	56.180	ENSORLG00015015518	-	89	56.180
ENSORLG00015010098	zgc:171927	84	81.215	ENSORLG00015010986	rab1ab	90	81.215
ENSORLG00015010098	zgc:171927	76	38.037	ENSORLG00015003353	zgc:55558	87	38.037
ENSORLG00015010098	zgc:171927	76	50.617	ENSORLG00015004377	RAB15	78	50.617
ENSORLG00015010098	zgc:171927	69	44.444	ENSORLG00015013453	-	63	44.444
ENSORLG00015010098	zgc:171927	91	45.596	ENSORLG00015020900	rab2a	88	45.596
ENSORLG00015010098	zgc:171927	81	41.081	ENSORLG00015012872	rab33ba	78	41.081
ENSORLG00015010098	zgc:171927	96	35.122	ENSORLG00015006970	rab6ba	93	35.122
ENSORLG00015010098	zgc:171927	80	37.714	ENSORLG00015004265	rab9b	82	37.714
ENSORLG00015010098	zgc:171927	73	35.849	ENSORLG00015014268	rabl2	67	35.849
ENSORLG00015010098	zgc:171927	79	35.260	ENSORLG00015002284	rerg	85	35.260
ENSORLG00015010098	zgc:171927	80	47.093	ENSORLG00015007869	rab12	71	47.093
ENSORLG00015010098	zgc:171927	85	32.787	ENSORLG00015010289	rras	93	32.787
ENSORLG00015010098	zgc:171927	76	65.432	ENSORLG00015010042	rab35b	80	65.432
ENSORLG00015010098	zgc:171927	94	35.323	ENSORLG00015013537	rab6bb	90	35.323
ENSORLG00015010098	zgc:171927	83	37.853	ENSORLG00015006162	rab6a	81	37.853
ENSORLG00015010098	zgc:171927	86	41.935	ENSORLG00015014594	rab3db	85	41.935
ENSORLG00015010098	zgc:171927	99	47.143	ENSORLG00015010257	rab11a	96	47.143
ENSORLG00015010098	zgc:171927	82	32.955	ENSORLG00015002191	rheb	90	32.955
ENSORLG00015010098	zgc:171927	78	53.614	ENSORLG00015020972	rab30	82	53.614
ENSORLG00015010098	zgc:171927	80	44.186	ENSORLG00015004273	rab42a	79	44.186
ENSORLG00015010098	zgc:171927	79	43.860	ENSORLG00015003202	RAB39B	80	43.860
ENSORLG00015010098	zgc:171927	78	33.333	ENSORLG00015020441	-	84	33.333
ENSORLG00015010098	zgc:171927	86	33.514	ENSORLG00015008252	si:ch73-116o1.2	88	33.514
ENSORLG00015010098	zgc:171927	56	30.833	ENSORLG00015017615	arl8ba	62	30.833
ENSORLG00015010098	zgc:171927	72	37.342	ENSORLG00015015121	si:dkey-13a21.4	77	37.342
ENSORLG00015010098	zgc:171927	99	45.024	ENSORLG00015016999	RAB11B	96	45.024
ENSORLG00015010098	zgc:171927	74	38.509	ENSORLG00015014829	rab34a	61	38.509
ENSORLG00015010098	zgc:171927	79	38.150	ENSORLG00015011467	kras	90	38.150
ENSORLG00015010098	zgc:171927	85	48.066	ENSORLG00015004739	rab18a	79	50.617
ENSORLG00015010098	zgc:171927	99	45.024	ENSORLG00015016946	rab11ba	79	45.024
ENSORLG00015010098	zgc:171927	76	38.509	ENSORLG00015010161	RAB41	76	38.509
ENSORLG00015010098	zgc:171927	82	43.678	ENSORLG00015012854	rab5aa	81	43.678
ENSORLG00015010098	zgc:171927	79	50.296	ENSORLG00015013638	rab15	79	50.296
ENSORLG00015010098	zgc:171927	92	74.747	ENSORLG00015000618	-	98	74.747
ENSORLG00015010098	zgc:171927	99	46.190	ENSORLG00015019591	rab11al	96	46.190
ENSORLG00015010098	zgc:171927	98	37.209	ENSORLG00015000142	si:dkey-34d22.5	97	37.209
ENSORLG00015010098	zgc:171927	81	35.838	ENSORLG00015004033	rab23	87	36.517
ENSORLG00015010098	zgc:171927	80	44.444	ENSORLG00015017737	rab5ab	79	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015010098	zgc:171927	100	92.991	ENSAPOG00000004980	-	100	92.991	Acanthochromis_polyacanthus
ENSORLG00015010098	zgc:171927	100	90.187	ENSACIG00000009006	zgc:171927	100	90.187	Amphilophus_citrinellus
ENSORLG00015010098	zgc:171927	71	88.387	ENSAOCG00000013808	-	93	96.694	Amphiprion_ocellaris
ENSORLG00015010098	zgc:171927	100	91.121	ENSAOCG00000024149	-	100	91.121	Amphiprion_ocellaris
ENSORLG00015010098	zgc:171927	100	91.589	ENSAPEG00000022171	zgc:171927	99	91.589	Amphiprion_percula
ENSORLG00015010098	zgc:171927	100	92.056	ENSATEG00000003430	zgc:171927	100	92.056	Anabas_testudineus
ENSORLG00015010098	zgc:171927	100	90.141	ENSACLG00000013734	-	100	90.141	Astatotilapia_calliptera
ENSORLG00015010098	zgc:171927	100	77.570	ENSAMXG00000039486	zgc:171927	100	77.570	Astyanax_mexicanus
ENSORLG00015010098	zgc:171927	100	88.318	ENSCSEG00000014416	zgc:171927	100	88.318	Cynoglossus_semilaevis
ENSORLG00015010098	zgc:171927	100	90.654	ENSCVAG00000009222	zgc:171927	100	90.654	Cyprinodon_variegatus
ENSORLG00015010098	zgc:171927	100	77.570	ENSDARG00000033056	zgc:171927	100	77.570	Danio_rerio
ENSORLG00015010098	zgc:171927	94	80.100	ENSELUG00000011680	zgc:171927	99	77.103	Esox_lucius
ENSORLG00015010098	zgc:171927	100	91.121	ENSFHEG00000022176	zgc:171927	100	91.121	Fundulus_heteroclitus
ENSORLG00015010098	zgc:171927	98	80.000	ENSGMOG00000004979	-	97	80.000	Gadus_morhua
ENSORLG00015010098	zgc:171927	98	89.474	ENSGAFG00000015702	zgc:171927	84	89.474	Gambusia_affinis
ENSORLG00015010098	zgc:171927	100	89.252	ENSGACG00000013401	zgc:171927	99	89.252	Gasterosteus_aculeatus
ENSORLG00015010098	zgc:171927	100	90.141	ENSHBUG00000002397	-	100	90.141	Haplochromis_burtoni
ENSORLG00015010098	zgc:171927	100	90.654	ENSKMAG00000009856	zgc:171927	100	90.654	Kryptolebias_marmoratus
ENSORLG00015010098	zgc:171927	100	88.785	ENSLBEG00000005791	-	100	88.785	Labrus_bergylta
ENSORLG00015010098	zgc:171927	98	88.038	ENSLBEG00000027226	-	89	88.038	Labrus_bergylta
ENSORLG00015010098	zgc:171927	98	70.335	ENSLOCG00000014692	zgc:171927	96	70.335	Lepisosteus_oculatus
ENSORLG00015010098	zgc:171927	100	88.318	ENSMAMG00000020135	zgc:171927	100	88.318	Mastacembelus_armatus
ENSORLG00015010098	zgc:171927	100	90.141	ENSMZEG00005024685	-	100	90.141	Maylandia_zebra
ENSORLG00015010098	zgc:171927	100	86.916	ENSMMOG00000009833	-	100	86.916	Mola_mola
ENSORLG00015010098	zgc:171927	100	88.732	ENSMALG00000021129	zgc:171927	100	88.732	Monopterus_albus
ENSORLG00015010098	zgc:171927	100	89.671	ENSNBRG00000006202	zgc:171927	100	89.671	Neolamprologus_brichardi
ENSORLG00015010098	zgc:171927	100	99.061	ENSORLG00000000602	zgc:171927	100	99.061	Oryzias_latipes
ENSORLG00015010098	zgc:171927	100	99.061	ENSORLG00020021071	zgc:171927	100	99.061	Oryzias_latipes_hni
ENSORLG00015010098	zgc:171927	100	93.925	ENSOMEG00000020594	zgc:171927	100	93.925	Oryzias_melastigma
ENSORLG00015010098	zgc:171927	100	90.187	ENSPFOG00000013810	zgc:171927	99	90.187	Poecilia_formosa
ENSORLG00015010098	zgc:171927	100	89.252	ENSPLAG00000005869	zgc:171927	100	89.252	Poecilia_latipinna
ENSORLG00015010098	zgc:171927	100	90.187	ENSPMEG00000022350	zgc:171927	100	90.187	Poecilia_mexicana
ENSORLG00015010098	zgc:171927	100	90.654	ENSPREG00000017517	zgc:171927	100	90.654	Poecilia_reticulata
ENSORLG00015010098	zgc:171927	100	90.141	ENSPNYG00000007520	-	100	90.141	Pundamilia_nyererei
ENSORLG00015010098	zgc:171927	100	78.037	ENSPNAG00000029574	zgc:171927	100	78.037	Pygocentrus_nattereri
ENSORLG00015010098	zgc:171927	100	76.636	ENSSFOG00015005464	zgc:171927	99	76.636	Scleropages_formosus
ENSORLG00015010098	zgc:171927	100	88.785	ENSSMAG00000004416	-	100	88.785	Scophthalmus_maximus
ENSORLG00015010098	zgc:171927	100	91.121	ENSSDUG00000004445	zgc:171927	100	91.121	Seriola_dumerili
ENSORLG00015010098	zgc:171927	100	91.121	ENSSLDG00000018024	zgc:171927	100	91.121	Seriola_lalandi_dorsalis
ENSORLG00015010098	zgc:171927	100	92.991	ENSSPAG00000013533	zgc:171927	100	92.991	Stegastes_partitus
ENSORLG00015010098	zgc:171927	100	91.121	ENSXCOG00000010695	zgc:171927	100	91.121	Xiphophorus_couchianus
ENSORLG00015010098	zgc:171927	100	91.121	ENSXMAG00000004683	zgc:171927	100	91.121	Xiphophorus_maculatus