EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015010104 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 10318 bases
Position: chr11:84589-94906
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015009315	zf-C2H2	PF00096.26	9.4e-25	1	4
ENSORLP00015009315	zf-C2H2	PF00096.26	9.4e-25	2	4
ENSORLP00015009315	zf-C2H2	PF00096.26	9.4e-25	3	4
ENSORLP00015009315	zf-C2H2	PF00096.26	9.4e-25	4	4
ENSORLP00015009315	zf-met	PF12874.7	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015015583	-	5000	-	ENSORLP00015009315	301 (aa)	-	-

Gene Model

Click here to download ENSORLG00015010104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015010104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015010104	-	55	33.557	ENSORLG00015007986	-	80	43.137
ENSORLG00015010104	-	74	36.842	ENSORLG00015022006	-	87	36.842
ENSORLG00015010104	-	88	39.744	ENSORLG00015016558	-	94	39.744
ENSORLG00015010104	-	62	35.000	ENSORLG00015007128	-	96	35.556
ENSORLG00015010104	-	50	41.096	ENSORLG00015018099	-	65	41.096
ENSORLG00015010104	-	54	38.346	ENSORLG00015018781	zgc:66448	71	40.789
ENSORLG00015010104	-	60	38.346	ENSORLG00015010892	-	90	38.843
ENSORLG00015010104	-	53	35.294	ENSORLG00015000258	-	93	35.294
ENSORLG00015010104	-	56	42.500	ENSORLG00015016420	-	89	42.500
ENSORLG00015010104	-	50	37.255	ENSORLG00015002548	-	59	37.255
ENSORLG00015010104	-	56	46.000	ENSORLG00015012776	-	93	46.000
ENSORLG00015010104	-	51	36.667	ENSORLG00015007132	-	54	35.862
ENSORLG00015010104	-	52	35.772	ENSORLG00015012627	-	75	35.772
ENSORLG00015010104	-	55	36.842	ENSORLG00015007742	-	85	40.000
ENSORLG00015010104	-	57	44.231	ENSORLG00015008496	-	98	39.286
ENSORLG00015010104	-	54	35.878	ENSORLG00015007164	-	90	35.878
ENSORLG00015010104	-	56	40.594	ENSORLG00015007168	-	72	40.594
ENSORLG00015010104	-	52	37.121	ENSORLG00015019986	-	53	37.121
ENSORLG00015010104	-	60	38.346	ENSORLG00015012892	-	94	38.346
ENSORLG00015010104	-	50	44.068	ENSORLG00015014006	-	81	44.068
ENSORLG00015010104	-	97	58.514	ENSORLG00015005524	scrt2	97	58.514
ENSORLG00015010104	-	52	46.591	ENSORLG00015011401	-	88	46.591
ENSORLG00015010104	-	50	41.772	ENSORLG00015007853	zbtb41	60	41.772
ENSORLG00015010104	-	52	35.294	ENSORLG00015009684	znf319b	69	35.294
ENSORLG00015010104	-	53	36.090	ENSORLG00015012062	-	71	41.975
ENSORLG00015010104	-	78	38.202	ENSORLG00015005877	sall3b	54	38.202
ENSORLG00015010104	-	69	39.286	ENSORLG00015010765	-	77	39.286
ENSORLG00015010104	-	53	39.416	ENSORLG00015013102	-	85	42.574
ENSORLG00015010104	-	54	36.047	ENSORLG00015016085	-	91	38.060
ENSORLG00015010104	-	51	39.130	ENSORLG00015016741	-	93	39.130
ENSORLG00015010104	-	51	51.111	ENSORLG00015011871	-	86	51.111
ENSORLG00015010104	-	50	51.786	ENSORLG00015012339	-	93	51.786
ENSORLG00015010104	-	51	39.080	ENSORLG00015011524	-	71	39.080
ENSORLG00015010104	-	50	46.429	ENSORLG00015012951	-	79	46.512
ENSORLG00015010104	-	56	44.318	ENSORLG00015014823	-	89	40.602
ENSORLG00015010104	-	58	44.872	ENSORLG00015007200	ZNF319	62	44.872
ENSORLG00015010104	-	96	40.067	ENSORLG00015008609	snai2	98	40.067
ENSORLG00015010104	-	53	36.842	ENSORLG00015012158	-	70	36.842
ENSORLG00015010104	-	54	35.766	ENSORLG00015011153	-	85	47.619
ENSORLG00015010104	-	50	38.571	ENSORLG00015013160	-	99	42.105
ENSORLG00015010104	-	54	35.897	ENSORLG00015012840	-	53	35.897
ENSORLG00015010104	-	99	73.754	ENSORLG00015019165	scrt1b	99	74.751
ENSORLG00015010104	-	54	38.462	ENSORLG00015015776	-	95	39.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015010104	-	97	61.074	ENSAPOG00000003680	scrt2	96	61.074	Acanthochromis_polyacanthus
ENSORLG00015010104	-	100	84.488	ENSAPOG00000015197	-	100	84.488	Acanthochromis_polyacanthus
ENSORLG00015010104	-	99	75.083	ENSAPOG00000009279	scrt1b	99	75.083	Acanthochromis_polyacanthus
ENSORLG00015010104	-	97	60.870	ENSACIG00000012604	scrt2	96	60.870	Amphilophus_citrinellus
ENSORLG00015010104	-	100	89.439	ENSACIG00000006586	-	100	89.439	Amphilophus_citrinellus
ENSORLG00015010104	-	97	54.603	ENSACIG00000001296	-	96	57.097	Amphilophus_citrinellus
ENSORLG00015010104	-	99	73.333	ENSACIG00000013613	scrt1b	99	73.333	Amphilophus_citrinellus
ENSORLG00015010104	-	99	75.083	ENSAOCG00000003910	scrt1b	99	75.083	Amphiprion_ocellaris
ENSORLG00015010104	-	100	89.109	ENSAOCG00000023304	-	100	89.109	Amphiprion_ocellaris
ENSORLG00015010104	-	97	61.074	ENSAOCG00000021557	scrt2	96	61.074	Amphiprion_ocellaris
ENSORLG00015010104	-	99	74.751	ENSAPEG00000000869	scrt1b	99	74.751	Amphiprion_percula
ENSORLG00015010104	-	100	89.109	ENSAPEG00000005677	-	100	89.109	Amphiprion_percula
ENSORLG00015010104	-	97	61.074	ENSAPEG00000022558	scrt2	96	61.074	Amphiprion_percula
ENSORLG00015010104	-	100	82.838	ENSATEG00000011660	-	100	82.838	Anabas_testudineus
ENSORLG00015010104	-	99	73.422	ENSATEG00000002302	scrt1b	99	74.751	Anabas_testudineus
ENSORLG00015010104	-	100	57.958	ENSATEG00000023998	scrt2	99	57.958	Anabas_testudineus
ENSORLG00015010104	-	97	51.343	ENSATEG00000003195	-	97	51.343	Anabas_testudineus
ENSORLG00015010104	-	68	78.431	ENSACAG00000016109	SCRT2	91	78.431	Anolis_carolinensis
ENSORLG00015010104	-	99	74.751	ENSACLG00000007162	scrt1b	99	74.751	Astatotilapia_calliptera
ENSORLG00015010104	-	100	88.449	ENSACLG00000012046	-	100	88.449	Astatotilapia_calliptera
ENSORLG00015010104	-	98	70.270	ENSAMXG00000042624	SCRT1	99	70.270	Astyanax_mexicanus
ENSORLG00015010104	-	99	77.667	ENSAMXG00000038085	scrt1a	99	77.667	Astyanax_mexicanus
ENSORLG00015010104	-	84	66.142	ENSAMXG00000034158	scrt2	87	66.142	Astyanax_mexicanus
ENSORLG00015010104	-	54	60.123	WBGene00000468	ces-1	61	58.929	Caenorhabditis_elegans
ENSORLG00015010104	-	87	54.982	ENSCPBG00000027613	SCRT2	100	54.982	Chrysemys_picta_bellii
ENSORLG00015010104	-	99	72.000	ENSCPBG00000018899	SCRT1	99	72.000	Chrysemys_picta_bellii
ENSORLG00015010104	-	100	60.061	ENSCSEG00000021542	scrt2	99	60.061	Cynoglossus_semilaevis
ENSORLG00015010104	-	100	87.129	ENSCSEG00000014892	-	100	87.129	Cynoglossus_semilaevis
ENSORLG00015010104	-	99	72.607	ENSCSEG00000008596	scrt1b	99	74.086	Cynoglossus_semilaevis
ENSORLG00015010104	-	99	75.415	ENSCVAG00000009561	scrt1b	99	75.415	Cyprinodon_variegatus
ENSORLG00015010104	-	100	56.928	ENSCVAG00000021038	scrt2	99	56.928	Cyprinodon_variegatus
ENSORLG00015010104	-	100	89.439	ENSCVAG00000003190	-	100	89.439	Cyprinodon_variegatus
ENSORLG00015010104	-	99	76.744	ENSDARG00000100821	scrt1a	99	76.744	Danio_rerio
ENSORLG00015010104	-	99	74.333	ENSDARG00000040214	scrt1b	99	74.333	Danio_rerio
ENSORLG00015010104	-	100	75.166	ENSELUG00000022228	scrt1a	100	75.166	Esox_lucius
ENSORLG00015010104	-	96	61.981	ENSELUG00000023883	scrt2	95	60.625	Esox_lucius
ENSORLG00015010104	-	98	76.094	ENSELUG00000005435	scrt1b	98	76.094	Esox_lucius
ENSORLG00015010104	-	66	77.500	ENSFALG00000005718	SCRT2	83	77.500	Ficedula_albicollis
ENSORLG00015010104	-	99	75.083	ENSFHEG00000014820	scrt1b	99	75.083	Fundulus_heteroclitus
ENSORLG00015010104	-	100	89.769	ENSFHEG00000009794	-	100	89.769	Fundulus_heteroclitus
ENSORLG00015010104	-	100	62.013	ENSFHEG00000005732	scrt2	99	62.013	Fundulus_heteroclitus
ENSORLG00015010104	-	97	54.037	ENSGMOG00000019519	scrt2	96	54.037	Gadus_morhua
ENSORLG00015010104	-	55	94.444	ENSGMOG00000013833	-	56	94.444	Gadus_morhua
ENSORLG00015010104	-	99	72.667	ENSGMOG00000000629	scrt1b	99	72.667	Gadus_morhua
ENSORLG00015010104	-	64	79.275	ENSGALG00000028912	SCRT2	97	59.667	Gallus_gallus
ENSORLG00015010104	-	100	59.062	ENSGAFG00000003093	scrt2	99	59.062	Gambusia_affinis
ENSORLG00015010104	-	100	82.724	ENSGAFG00000009650	-	100	82.724	Gambusia_affinis
ENSORLG00015010104	-	99	75.415	ENSGAFG00000007636	scrt1b	99	75.415	Gambusia_affinis
ENSORLG00015010104	-	99	72.910	ENSGACG00000008982	scrt1b	99	72.910	Gasterosteus_aculeatus
ENSORLG00015010104	-	100	83.828	ENSGACG00000004072	-	100	83.828	Gasterosteus_aculeatus
ENSORLG00015010104	-	96	60.481	ENSGAGG00000020761	SCRT2	96	60.481	Gopherus_agassizii
ENSORLG00015010104	-	68	71.226	ENSGAGG00000020760	-	81	71.226	Gopherus_agassizii
ENSORLG00015010104	-	98	73.401	ENSGAGG00000011736	SCRT1	99	73.401	Gopherus_agassizii
ENSORLG00015010104	-	100	89.109	ENSHBUG00000019101	-	100	89.109	Haplochromis_burtoni
ENSORLG00015010104	-	97	61.074	ENSHBUG00000012492	scrt2	96	61.074	Haplochromis_burtoni
ENSORLG00015010104	-	99	74.751	ENSHBUG00000016621	scrt1b	99	74.751	Haplochromis_burtoni
ENSORLG00015010104	-	99	74.419	ENSHCOG00000016704	scrt1b	99	74.419	Hippocampus_comes
ENSORLG00015010104	-	100	71.521	ENSHCOG00000016179	-	100	71.521	Hippocampus_comes
ENSORLG00015010104	-	97	60.772	ENSHCOG00000008116	scrt2	97	60.772	Hippocampus_comes
ENSORLG00015010104	-	98	68.581	ENSIPUG00000005547	-	99	68.581	Ictalurus_punctatus
ENSORLG00015010104	-	98	76.510	ENSIPUG00000004551	scrt1a	99	76.510	Ictalurus_punctatus
ENSORLG00015010104	-	100	58.133	ENSKMAG00000018087	scrt2	99	58.133	Kryptolebias_marmoratus
ENSORLG00015010104	-	100	91.089	ENSKMAG00000009489	-	100	91.089	Kryptolebias_marmoratus
ENSORLG00015010104	-	99	75.083	ENSKMAG00000005484	scrt1b	99	75.083	Kryptolebias_marmoratus
ENSORLG00015010104	-	100	57.186	ENSLBEG00000015419	scrt2	99	57.186	Labrus_bergylta
ENSORLG00015010104	-	100	86.711	ENSLBEG00000023388	-	100	86.711	Labrus_bergylta
ENSORLG00015010104	-	99	73.179	ENSLACG00000003588	SCRT1	99	73.179	Latimeria_chalumnae
ENSORLG00015010104	-	99	75.333	ENSLOCG00000007573	scrt1b	99	75.333	Lepisosteus_oculatus
ENSORLG00015010104	-	97	53.292	ENSLOCG00000002246	scrt2	97	54.859	Lepisosteus_oculatus
ENSORLG00015010104	-	96	91.111	ENSMFAG00000035496	SCRT1	92	88.966	Macaca_fascicularis
ENSORLG00015010104	-	99	73.754	ENSMAMG00000011698	scrt1b	99	75.083	Mastacembelus_armatus
ENSORLG00015010104	-	100	57.958	ENSMAMG00000001291	scrt2	99	57.958	Mastacembelus_armatus
ENSORLG00015010104	-	99	74.751	ENSMZEG00005005627	scrt1b	99	74.751	Maylandia_zebra
ENSORLG00015010104	-	97	61.074	ENSMZEG00005026445	scrt2	96	61.074	Maylandia_zebra
ENSORLG00015010104	-	100	89.109	ENSMZEG00005026702	-	100	89.109	Maylandia_zebra
ENSORLG00015010104	-	64	79.275	ENSMGAG00000016579	SCRT2	80	79.275	Meleagris_gallopavo
ENSORLG00015010104	-	100	87.829	ENSMMOG00000018345	-	100	87.829	Mola_mola
ENSORLG00015010104	-	99	73.422	ENSMMOG00000003327	scrt1b	99	73.422	Mola_mola
ENSORLG00015010104	-	100	58.182	ENSMMOG00000009272	scrt2	99	58.485	Mola_mola
ENSORLG00015010104	-	99	74.086	ENSMALG00000012704	scrt1b	99	75.415	Monopterus_albus
ENSORLG00015010104	-	97	61.905	ENSMALG00000013656	scrt2	96	61.905	Monopterus_albus
ENSORLG00015010104	-	50	81.879	ENSNGAG00000020815	Scrt2	75	80.519	Nannospalax_galili
ENSORLG00015010104	-	100	89.439	ENSNBRG00000014882	-	100	89.439	Neolamprologus_brichardi
ENSORLG00015010104	-	97	60.738	ENSNBRG00000007221	scrt2	96	60.738	Neolamprologus_brichardi
ENSORLG00015010104	-	99	73.000	ENSNBRG00000013983	scrt1b	99	73.000	Neolamprologus_brichardi
ENSORLG00015010104	-	97	85.761	ENSONIG00000019809	-	100	85.761	Oreochromis_niloticus
ENSORLG00015010104	-	97	57.045	ENSONIG00000003152	-	96	57.045	Oreochromis_niloticus
ENSORLG00015010104	-	99	74.751	ENSONIG00000006007	scrt1b	99	74.751	Oreochromis_niloticus
ENSORLG00015010104	-	100	57.530	ENSONIG00000016758	scrt2	99	57.229	Oreochromis_niloticus
ENSORLG00015010104	-	99	73.754	ENSORLG00000025651	scrt1b	99	74.751	Oryzias_latipes
ENSORLG00015010104	-	100	98.007	ENSORLG00000022825	-	100	98.007	Oryzias_latipes
ENSORLG00015010104	-	97	58.514	ENSORLG00000024051	scrt2	97	58.514	Oryzias_latipes
ENSORLG00015010104	-	97	58.514	ENSORLG00020011478	scrt2	97	58.514	Oryzias_latipes_hni
ENSORLG00015010104	-	99	73.754	ENSORLG00020012967	scrt1b	99	74.751	Oryzias_latipes_hni
ENSORLG00015010104	-	100	92.691	ENSOMEG00000000286	-	100	92.691	Oryzias_melastigma
ENSORLG00015010104	-	99	73.754	ENSOMEG00000003925	scrt1b	99	74.751	Oryzias_melastigma
ENSORLG00015010104	-	97	59.133	ENSOMEG00000002661	scrt2	97	59.133	Oryzias_melastigma
ENSORLG00015010104	-	99	74.667	ENSPKIG00000022303	SCRT1	99	74.667	Paramormyrops_kingsleyae
ENSORLG00015010104	-	99	75.667	ENSPKIG00000020085	scrt1a	99	75.667	Paramormyrops_kingsleyae
ENSORLG00015010104	-	99	72.000	ENSPMGG00000002260	scrt1b	99	72.000	Periophthalmus_magnuspinnatus
ENSORLG00015010104	-	100	85.149	ENSPMGG00000021402	-	100	85.149	Periophthalmus_magnuspinnatus
ENSORLG00015010104	-	100	62.295	ENSPMGG00000016561	scrt2	99	62.295	Periophthalmus_magnuspinnatus
ENSORLG00015010104	-	100	90.033	ENSPFOG00000005616	-	100	90.033	Poecilia_formosa
ENSORLG00015010104	-	99	75.415	ENSPFOG00000017719	scrt1b	99	75.415	Poecilia_formosa
ENSORLG00015010104	-	100	57.229	ENSPFOG00000007738	scrt2	99	57.229	Poecilia_formosa
ENSORLG00015010104	-	99	75.415	ENSPLAG00000009876	scrt1b	99	75.415	Poecilia_latipinna
ENSORLG00015010104	-	100	90.033	ENSPLAG00000011718	-	100	90.033	Poecilia_latipinna
ENSORLG00015010104	-	100	61.564	ENSPLAG00000005765	scrt2	99	61.564	Poecilia_latipinna
ENSORLG00015010104	-	100	90.033	ENSPMEG00000011706	-	100	90.033	Poecilia_mexicana
ENSORLG00015010104	-	100	61.564	ENSPMEG00000001538	scrt2	99	61.564	Poecilia_mexicana
ENSORLG00015010104	-	99	75.415	ENSPMEG00000013274	scrt1b	99	75.415	Poecilia_mexicana
ENSORLG00015010104	-	99	75.415	ENSPREG00000018985	scrt1b	99	75.415	Poecilia_reticulata
ENSORLG00015010104	-	100	90.033	ENSPREG00000012166	-	100	90.033	Poecilia_reticulata
ENSORLG00015010104	-	100	57.229	ENSPREG00000001147	scrt2	99	57.229	Poecilia_reticulata
ENSORLG00015010104	-	99	74.751	ENSPNYG00000017733	scrt1b	99	74.751	Pundamilia_nyererei
ENSORLG00015010104	-	100	88.779	ENSPNYG00000008865	-	100	88.779	Pundamilia_nyererei
ENSORLG00015010104	-	97	61.074	ENSPNYG00000013109	scrt2	96	61.074	Pundamilia_nyererei
ENSORLG00015010104	-	99	76.667	ENSPNAG00000017415	scrt1a	99	76.667	Pygocentrus_nattereri
ENSORLG00015010104	-	98	72.148	ENSPNAG00000027880	-	99	72.148	Pygocentrus_nattereri
ENSORLG00015010104	-	99	75.333	ENSSFOG00015001195	SCRT1	99	75.333	Scleropages_formosus
ENSORLG00015010104	-	100	74.172	ENSSMAG00000019207	scrt1b	100	74.172	Scophthalmus_maximus
ENSORLG00015010104	-	100	86.424	ENSSMAG00000005122	-	100	86.424	Scophthalmus_maximus
ENSORLG00015010104	-	98	59.688	ENSSDUG00000001637	scrt2	96	59.375	Seriola_dumerili
ENSORLG00015010104	-	100	89.769	ENSSDUG00000013215	-	100	89.769	Seriola_dumerili
ENSORLG00015010104	-	99	75.415	ENSSDUG00000007752	scrt1b	99	75.415	Seriola_dumerili
ENSORLG00015010104	-	100	57.357	ENSSLDG00000013565	scrt2	99	57.057	Seriola_lalandi_dorsalis
ENSORLG00015010104	-	100	89.769	ENSSLDG00000016454	-	100	89.769	Seriola_lalandi_dorsalis
ENSORLG00015010104	-	99	75.415	ENSSLDG00000017166	scrt1b	99	75.415	Seriola_lalandi_dorsalis
ENSORLG00015010104	-	97	60.606	ENSSPUG00000018637	SCRT2	97	60.606	Sphenodon_punctatus
ENSORLG00015010104	-	97	61.409	ENSSPAG00000014018	scrt2	96	61.409	Stegastes_partitus
ENSORLG00015010104	-	100	89.109	ENSSPAG00000006788	-	100	89.109	Stegastes_partitus
ENSORLG00015010104	-	99	75.415	ENSSPAG00000002200	scrt1b	99	75.415	Stegastes_partitus
ENSORLG00015010104	-	66	77.387	ENSTGUG00000006801	SCRT2	86	77.387	Taeniopygia_guttata
ENSORLG00015010104	-	97	60.828	ENSTRUG00000007620	scrt2	97	60.828	Takifugu_rubripes
ENSORLG00015010104	-	87	78.161	ENSTRUG00000019558	-	81	78.161	Takifugu_rubripes
ENSORLG00015010104	-	98	74.497	ENSTRUG00000011637	scrt1b	99	74.497	Takifugu_rubripes
ENSORLG00015010104	-	100	85.149	ENSTRUG00000012719	-	100	85.149	Takifugu_rubripes
ENSORLG00015010104	-	99	74.086	ENSTNIG00000018384	scrt1b	99	74.086	Tetraodon_nigroviridis
ENSORLG00015010104	-	100	62.500	ENSTNIG00000012473	scrt2	100	62.500	Tetraodon_nigroviridis
ENSORLG00015010104	-	100	59.375	ENSXCOG00000014367	scrt2	99	59.375	Xiphophorus_couchianus
ENSORLG00015010104	-	99	75.083	ENSXCOG00000019675	scrt1b	99	75.083	Xiphophorus_couchianus
ENSORLG00015010104	-	100	82.060	ENSXCOG00000019861	-	100	82.060	Xiphophorus_couchianus
ENSORLG00015010104	-	100	89.369	ENSXMAG00000015353	-	100	89.369	Xiphophorus_maculatus
ENSORLG00015010104	-	99	75.083	ENSXMAG00000027885	scrt1b	99	75.083	Xiphophorus_maculatus
ENSORLG00015010104	-	100	57.530	ENSXMAG00000028567	scrt2	99	57.530	Xiphophorus_maculatus