EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015010161 (Gene tree)
Gene ID: -
Gene Symbol: RAB41
Alias: -
Full Name: ras-related protein Rab-6B
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 10828 bases
Position: chr10:13423419-13434246
Accession: 101168376
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015027840	MMR_HSR1	PF01926.23	8.5e-05	1	1
ENSORLP00015009359	MMR_HSR1	PF01926.23	0.00012	1	1
ENSORLP00015027870	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015015641	RAB41-202	3512	-	ENSORLP00015009359	230 (aa)	-	-
ENSORLT00015015668	RAB41-204	3512	-	ENSORLP00015027870	230 (aa)	-	-
ENSORLT00015015616	RAB41-201	3033	-	ENSORLP00015027840	211 (aa)	XP_004073166	UPI0002A48E2F
ENSORLT00015015660	RAB41-203	3512	-	ENSORLP00015009376	230 (aa)	-	-

Gene Model

Click here to download ENSORLG00015010161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015010161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015010161	RAB41	74	42.675	ENSORLG00015014594	rab3db	71	44.586
ENSORLG00015010161	RAB41	75	38.608	ENSORLG00015000893	-	73	40.506
ENSORLG00015010161	RAB41	92	39.000	ENSORLG00015010986	rab1ab	96	39.000
ENSORLG00015010161	RAB41	81	30.114	ENSORLG00015020441	-	86	30.114
ENSORLG00015010161	RAB41	79	38.728	ENSORLG00015004739	rab18a	83	38.728
ENSORLG00015010161	RAB41	98	81.159	ENSORLG00015013537	rab6bb	99	81.159
ENSORLG00015010161	RAB41	75	30.726	ENSORLG00015014268	rabl2	67	32.051
ENSORLG00015010161	RAB41	74	37.580	ENSORLG00015016946	rab11ba	59	38.217
ENSORLG00015010161	RAB41	73	38.312	ENSORLG00015010042	rab35b	76	38.312
ENSORLG00015010161	RAB41	94	35.577	ENSORLG00015022289	-	98	35.577
ENSORLG00015010161	RAB41	72	32.919	ENSORLG00015020495	rasl11a	63	32.919
ENSORLG00015010161	RAB41	81	33.143	ENSORLG00015002191	rheb	93	34.857
ENSORLG00015010161	RAB41	91	34.762	ENSORLG00015019569	rab25b	99	34.135
ENSORLG00015010161	RAB41	75	38.509	ENSORLG00015014829	rab34a	61	38.509
ENSORLG00015010161	RAB41	70	42.953	ENSORLG00015016047	zgc:101559	64	42.953
ENSORLG00015010161	RAB41	93	39.409	ENSORLG00015015327	rab33a	72	38.462
ENSORLG00015010161	RAB41	74	39.623	ENSORLG00015003202	RAB39B	75	39.623
ENSORLG00015010161	RAB41	92	38.308	ENSORLG00015000618	-	96	39.175
ENSORLG00015010161	RAB41	83	31.111	ENSORLG00015001298	rhebl1	99	32.609
ENSORLG00015010161	RAB41	74	32.911	ENSORLG00015003353	zgc:55558	84	32.911
ENSORLG00015010161	RAB41	90	36.316	ENSORLG00015013638	rab15	87	36.316
ENSORLG00015010161	RAB41	69	37.671	ENSORLG00015004033	rab23	74	39.474
ENSORLG00015010161	RAB41	74	37.580	ENSORLG00015020173	rab11bb	72	38.217
ENSORLG00015010161	RAB41	76	38.509	ENSORLG00015010098	zgc:171927	76	38.509
ENSORLG00015010161	RAB41	96	84.729	ENSORLG00015006970	rab6ba	98	84.729
ENSORLG00015010161	RAB41	74	36.306	ENSORLG00015010257	rab11a	73	36.943
ENSORLG00015010161	RAB41	92	36.500	ENSORLG00015006820	-	96	36.500
ENSORLG00015010161	RAB41	75	30.488	ENSORLG00015002284	rerg	80	30.675
ENSORLG00015010161	RAB41	75	38.608	ENSORLG00015006881	rab14	73	40.506
ENSORLG00015010161	RAB41	74	38.217	ENSORLG00015016999	RAB11B	72	38.854
ENSORLG00015010161	RAB41	82	32.022	ENSORLG00015010289	rras	90	32.022
ENSORLG00015010161	RAB41	79	40.351	ENSORLG00015007182	rab18b	83	41.520
ENSORLG00015010161	RAB41	77	41.104	ENSORLG00015013564	-	80	43.396
ENSORLG00015010161	RAB41	87	36.816	ENSORLG00015012872	rab33ba	84	36.816
ENSORLG00015010161	RAB41	84	42.938	ENSORLG00015012854	rab5aa	82	42.938
ENSORLG00015010161	RAB41	73	39.490	ENSORLG00015004273	rab42a	72	39.490
ENSORLG00015010161	RAB41	92	37.186	ENSORLG00015020900	rab2a	91	37.186
ENSORLG00015010161	RAB41	78	38.798	ENSORLG00015007869	rab12	76	38.798
ENSORLG00015010161	RAB41	86	41.758	ENSORLG00015017737	rab5ab	84	42.308
ENSORLG00015010161	RAB41	75	38.509	ENSORLG00015000584	rab34b	59	38.509
ENSORLG00015010161	RAB41	76	42.857	ENSORLG00015020972	rab30	79	42.857
ENSORLG00015010161	RAB41	82	41.379	ENSORLG00015021900	rab5c	80	41.954
ENSORLG00015010161	RAB41	83	32.584	ENSORLG00015006780	-	99	32.990
ENSORLG00015010161	RAB41	75	37.654	ENSORLG00015015121	si:dkey-13a21.4	79	37.654
ENSORLG00015010161	RAB41	76	37.888	ENSORLG00015012725	rab25a	53	38.509
ENSORLG00015010161	RAB41	70	40.909	ENSORLG00015013453	-	65	39.490
ENSORLG00015010161	RAB41	91	34.804	ENSORLG00015004265	rab9b	93	34.804
ENSORLG00015010161	RAB41	92	36.000	ENSORLG00015002344	-	96	36.000
ENSORLG00015010161	RAB41	98	88.889	ENSORLG00015006162	rab6a	99	88.889
ENSORLG00015010161	RAB41	75	43.038	ENSORLG00015015518	-	79	43.671
ENSORLG00015010161	RAB41	77	41.667	ENSORLG00015000142	si:dkey-34d22.5	76	41.667
ENSORLG00015010161	RAB41	74	38.854	ENSORLG00015004377	RAB15	75	40.764
ENSORLG00015010161	RAB41	92	32.075	ENSORLG00015019591	rab11al	95	32.075
ENSORLG00015010161	RAB41	74	32.911	ENSORLG00015011467	kras	96	31.148

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015010161	RAB41	100	92.417	ENSACIG00000010914	RAB41	100	92.417	Amphilophus_citrinellus
ENSORLG00015010161	RAB41	100	99.052	ENSAOCG00000022426	RAB41	100	99.052	Amphiprion_ocellaris
ENSORLG00015010161	RAB41	100	99.052	ENSAPEG00000007931	RAB41	100	99.052	Amphiprion_percula
ENSORLG00015010161	RAB41	94	68.687	ENSTSYG00000000768	RAB41	87	68.687	Carlito_syrichta
ENSORLG00015010161	RAB41	93	63.959	ENSCATG00000037380	RAB41	87	63.959	Cercocebus_atys
ENSORLG00015010161	RAB41	100	91.943	ENSCPBG00000014340	RAB41	100	91.943	Chrysemys_picta_bellii
ENSORLG00015010161	RAB41	100	99.052	ENSFHEG00000015996	RAB41	100	99.052	Fundulus_heteroclitus
ENSORLG00015010161	RAB41	100	99.052	ENSHBUG00000014338	RAB41	100	99.052	Haplochromis_burtoni
ENSORLG00015010161	RAB41	100	97.156	ENSLBEG00000008746	RAB41	100	97.156	Labrus_bergylta
ENSORLG00015010161	RAB41	93	65.482	ENSMFAG00000000762	RAB41	87	65.482	Macaca_fascicularis
ENSORLG00015010161	RAB41	93	65.482	ENSMMUG00000013937	RAB41	87	65.482	Macaca_mulatta
ENSORLG00015010161	RAB41	87	67.391	ENSMNEG00000045569	RAB41	82	67.391	Macaca_nemestrina
ENSORLG00015010161	RAB41	91	64.249	ENSMLEG00000038149	RAB41	86	64.249	Mandrillus_leucophaeus
ENSORLG00015010161	RAB41	100	91.981	ENSONIG00000002774	RAB41	100	91.981	Oreochromis_niloticus
ENSORLG00015010161	RAB41	100	100.000	ENSORLG00000027669	RAB41	100	100.000	Oryzias_latipes
ENSORLG00015010161	RAB41	100	99.052	ENSOMEG00000017258	RAB41	100	99.052	Oryzias_melastigma
ENSORLG00015010161	RAB41	93	64.975	ENSPANG00000007317	RAB41	87	64.975	Papio_anubis
ENSORLG00015010161	RAB41	98	93.204	ENSPKIG00000014618	-	98	93.204	Paramormyrops_kingsleyae
ENSORLG00015010161	RAB41	100	92.417	ENSPMGG00000017830	RAB41	100	92.417	Periophthalmus_magnuspinnatus
ENSORLG00015010161	RAB41	100	92.417	ENSPFOG00000011424	RAB41	100	92.417	Poecilia_formosa
ENSORLG00015010161	RAB41	100	92.417	ENSPREG00000009535	RAB41	100	92.417	Poecilia_reticulata
ENSORLG00015010161	RAB41	93	65.482	ENSRBIG00000027991	RAB41	87	65.482	Rhinopithecus_bieti
ENSORLG00015010161	RAB41	99	94.258	ENSSFOG00015011268	RAB41	99	94.258	Scleropages_formosus
ENSORLG00015010161	RAB41	100	90.654	ENSTNIG00000016831	RAB41	100	90.654	Tetraodon_nigroviridis
ENSORLG00015010161	RAB41	99	88.517	ENSXETG00000030938	rab41	99	88.517	Xenopus_tropicalis
ENSORLG00015010161	RAB41	100	92.417	ENSXCOG00000015802	RAB41	100	92.417	Xiphophorus_couchianus
ENSORLG00015010161	RAB41	100	99.052	ENSXMAG00000027787	RAB41	100	99.052	Xiphophorus_maculatus