EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015010408 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial (putative)
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 13215 bases
Position: chr11:8272759-8285973
Accession: ZDB-GENE-060503-575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015028036	tRNA-synt_1g	PF09334.11	7.9e-14	1	1
ENSORLP00015028036	Anticodon_1	PF08264.13	2.7e-35	1	1
ENSORLP00015028036	tRNA-synt_1	PF00133.22	1.7e-189	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015031451	-	3672	-	ENSORLP00015028036	1089 (aa)	-	-

Gene Model

Click here to download ENSORLG00015010408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015010408's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015010408	vars2	92	50.396	ENSORLG00015009001	vars	79	50.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015010408	vars2	95	75.361	ENSAPOG00000007396	vars2	99	73.573	Acanthochromis_polyacanthus
ENSORLG00015010408	vars2	95	50.945	ENSAMEG00000012997	VARS2	91	51.707	Ailuropoda_melanoleuca
ENSORLG00015010408	vars2	99	72.953	ENSACIG00000004344	vars2	95	75.814	Amphilophus_citrinellus
ENSORLG00015010408	vars2	95	75.457	ENSAOCG00000000476	vars2	95	75.536	Amphiprion_ocellaris
ENSORLG00015010408	vars2	95	75.361	ENSAPEG00000008646	vars2	92	75.536	Amphiprion_percula
ENSORLG00015010408	vars2	96	76.753	ENSATEG00000012291	vars2	94	77.264	Anabas_testudineus
ENSORLG00015010408	vars2	95	53.053	ENSACAG00000022093	VARS2	91	54.320	Anolis_carolinensis
ENSORLG00015010408	vars2	96	50.760	ENSANAG00000038018	VARS2	92	51.976	Aotus_nancymaae
ENSORLG00015010408	vars2	99	72.744	ENSACLG00000018673	vars2	99	72.744	Astatotilapia_calliptera
ENSORLG00015010408	vars2	96	67.049	ENSAMXG00000017773	vars2	92	70.382	Astyanax_mexicanus
ENSORLG00015010408	vars2	96	51.420	ENSBTAG00000010698	VARS2	93	52.233	Bos_taurus
ENSORLG00015010408	vars2	96	50.856	ENSCJAG00000019826	VARS2	92	52.174	Callithrix_jacchus
ENSORLG00015010408	vars2	92	52.783	ENSCAFG00000000454	VARS2	89	53.807	Canis_familiaris
ENSORLG00015010408	vars2	83	56.354	ENSCAFG00020019387	VARS2	89	56.472	Canis_lupus_dingo
ENSORLG00015010408	vars2	96	50.902	ENSCHIG00000007847	VARS2	94	51.503	Capra_hircus
ENSORLG00015010408	vars2	97	50.988	ENSTSYG00000009904	VARS2	92	52.423	Carlito_syrichta
ENSORLG00015010408	vars2	88	51.983	ENSCAPG00000017770	VARS2	99	51.983	Cavia_aperea
ENSORLG00015010408	vars2	99	49.816	ENSCPOG00000021834	VARS2	92	51.724	Cavia_porcellus
ENSORLG00015010408	vars2	96	50.760	ENSCCAG00000037907	VARS2	92	52.075	Cebus_capucinus
ENSORLG00015010408	vars2	96	50.951	ENSCATG00000032554	VARS2	92	52.372	Cercocebus_atys
ENSORLG00015010408	vars2	96	51.233	ENSCLAG00000002889	VARS2	94	51.895	Chinchilla_lanigera
ENSORLG00015010408	vars2	95	51.681	ENSCSAG00000008327	VARS2	91	52.888	Chlorocebus_sabaeus
ENSORLG00015010408	vars2	91	55.242	ENSCPBG00000021502	VARS2	96	55.242	Chrysemys_picta_bellii
ENSORLG00015010408	vars2	96	50.856	ENSCANG00000014991	VARS2	91	52.174	Colobus_angolensis_palliatus
ENSORLG00015010408	vars2	96	51.521	ENSCGRG00001021535	Vars2	92	52.663	Cricetulus_griseus_chok1gshd
ENSORLG00015010408	vars2	96	51.521	ENSCGRG00000014112	Vars2	92	52.663	Cricetulus_griseus_crigri
ENSORLG00015010408	vars2	99	61.464	ENSCSEG00000015432	vars2	86	81.935	Cynoglossus_semilaevis
ENSORLG00015010408	vars2	65	76.056	ENSCVAG00000017765	vars2	98	76.056	Cyprinodon_variegatus
ENSORLG00015010408	vars2	99	64.917	ENSDARG00000056717	vars2	94	67.790	Danio_rerio
ENSORLG00015010408	vars2	80	49.317	ENSDORG00000008516	Vars2	94	49.317	Dipodomys_ordii
ENSORLG00015010408	vars2	94	45.946	ENSETEG00000014844	VARS2	92	46.482	Echinops_telfairi
ENSORLG00015010408	vars2	96	50.760	ENSEASG00005019997	VARS2	94	54.930	Equus_asinus_asinus
ENSORLG00015010408	vars2	96	51.187	ENSECAG00000018202	VARS2	92	52.315	Equus_caballus
ENSORLG00015010408	vars2	99	66.758	ENSELUG00000017824	vars2	94	68.719	Esox_lucius
ENSORLG00015010408	vars2	94	51.622	ENSFCAG00000010531	VARS2	92	52.772	Felis_catus
ENSORLG00015010408	vars2	95	50.958	ENSFDAG00000017216	VARS2	92	51.823	Fukomys_damarensis
ENSORLG00015010408	vars2	93	68.245	ENSFHEG00000013932	vars2	92	70.763	Fundulus_heteroclitus
ENSORLG00015010408	vars2	90	67.211	ENSGMOG00000018960	vars2	99	67.211	Gadus_morhua
ENSORLG00015010408	vars2	93	73.333	ENSGAFG00000004737	vars2	92	73.333	Gambusia_affinis
ENSORLG00015010408	vars2	93	73.043	ENSGACG00000001464	vars2	99	73.043	Gasterosteus_aculeatus
ENSORLG00015010408	vars2	91	55.334	ENSGAGG00000011652	VARS2	99	55.334	Gopherus_agassizii
ENSORLG00015010408	vars2	96	50.856	ENSGGOG00000014587	VARS2	92	52.075	Gorilla_gorilla
ENSORLG00015010408	vars2	99	70.230	ENSHBUG00000002448	vars2	94	74.593	Haplochromis_burtoni
ENSORLG00015010408	vars2	96	51.478	ENSHGLG00000012886	VARS2	90	52.089	Heterocephalus_glaber_female
ENSORLG00015010408	vars2	96	51.478	ENSHGLG00100016535	VARS2	94	51.992	Heterocephalus_glaber_male
ENSORLG00015010408	vars2	67	72.925	ENSHCOG00000017907	vars2	97	72.925	Hippocampus_comes
ENSORLG00015010408	vars2	93	68.213	ENSIPUG00000015573	Vars2	93	68.213	Ictalurus_punctatus
ENSORLG00015010408	vars2	96	50.906	ENSSTOG00000009924	VARS2	94	51.506	Ictidomys_tridecemlineatus
ENSORLG00015010408	vars2	97	51.695	ENSJJAG00000011144	Vars2	94	52.872	Jaculus_jaculus
ENSORLG00015010408	vars2	99	72.777	ENSKMAG00000001393	vars2	99	72.777	Kryptolebias_marmoratus
ENSORLG00015010408	vars2	51	78.442	ENSLBEG00000005480	-	81	78.442	Labrus_bergylta
ENSORLG00015010408	vars2	100	70.620	ENSLBEG00000011949	vars2	99	70.712	Labrus_bergylta
ENSORLG00015010408	vars2	95	50.663	ENSLACG00000001576	-	97	50.965	Latimeria_chalumnae
ENSORLG00015010408	vars2	96	51.567	ENSLAFG00000015183	VARS2	94	52.093	Loxodonta_africana
ENSORLG00015010408	vars2	96	51.280	ENSMFAG00000042367	VARS2	92	52.709	Macaca_fascicularis
ENSORLG00015010408	vars2	96	51.469	ENSMMUG00000018609	VARS2	92	52.906	Macaca_mulatta
ENSORLG00015010408	vars2	96	51.185	ENSMNEG00000043163	VARS2	92	52.611	Macaca_nemestrina
ENSORLG00015010408	vars2	96	51.046	ENSMLEG00000041728	VARS2	89	52.470	Mandrillus_leucophaeus
ENSORLG00015010408	vars2	96	73.992	ENSMAMG00000020339	vars2	94	74.485	Mastacembelus_armatus
ENSORLG00015010408	vars2	99	72.652	ENSMZEG00005017669	vars2	99	72.652	Maylandia_zebra
ENSORLG00015010408	vars2	99	51.613	ENSMAUG00000018946	Vars2	93	52.827	Mesocricetus_auratus
ENSORLG00015010408	vars2	79	56.387	ENSMICG00000005365	VARS2	94	57.327	Microcebus_murinus
ENSORLG00015010408	vars2	89	57.215	ENSMOCG00000014607	Vars2	92	58.964	Microtus_ochrogaster
ENSORLG00015010408	vars2	93	73.327	ENSMMOG00000012122	vars2	94	73.327	Mola_mola
ENSORLG00015010408	vars2	92	51.378	ENSMODG00000015848	VARS2	92	51.220	Monodelphis_domestica
ENSORLG00015010408	vars2	93	73.643	ENSMALG00000009217	vars2	99	73.643	Monopterus_albus
ENSORLG00015010408	vars2	96	51.192	MGP_CAROLIEiJ_G0021529	Vars2	97	54.750	Mus_caroli
ENSORLG00015010408	vars2	96	50.760	ENSMUSG00000038838	Vars2	98	54.374	Mus_musculus
ENSORLG00015010408	vars2	96	50.856	MGP_PahariEiJ_G0020523	Vars2	96	54.514	Mus_pahari
ENSORLG00015010408	vars2	96	51.046	MGP_SPRETEiJ_G0022436	Vars2	97	54.577	Mus_spretus
ENSORLG00015010408	vars2	95	51.659	ENSMPUG00000011643	VARS2	92	52.830	Mustela_putorius_furo
ENSORLG00015010408	vars2	92	52.226	ENSMLUG00000002356	VARS2	87	52.876	Myotis_lucifugus
ENSORLG00015010408	vars2	97	47.235	ENSNGAG00000020607	Vars2	91	48.802	Nannospalax_galili
ENSORLG00015010408	vars2	62	66.201	ENSNBRG00000001624	vars2	58	66.201	Neolamprologus_brichardi
ENSORLG00015010408	vars2	95	50.480	ENSNLEG00000005625	VARS2	91	51.443	Nomascus_leucogenys
ENSORLG00015010408	vars2	77	56.167	ENSMEUG00000014475	VARS2	89	56.167	Notamacropus_eugenii
ENSORLG00015010408	vars2	87	51.741	ENSOPRG00000000682	VARS2	82	61.184	Ochotona_princeps
ENSORLG00015010408	vars2	96	50.524	ENSODEG00000017965	VARS2	94	51.312	Octodon_degus
ENSORLG00015010408	vars2	93	55.371	ENSONIG00000004734	vars2	99	55.371	Oreochromis_niloticus
ENSORLG00015010408	vars2	73	43.073	ENSOANG00000000398	-	93	43.073	Ornithorhynchus_anatinus
ENSORLG00015010408	vars2	96	48.774	ENSOCUG00000021496	VARS2	60	49.471	Oryctolagus_cuniculus
ENSORLG00015010408	vars2	100	97.062	ENSORLG00000010632	vars2	100	97.062	Oryzias_latipes
ENSORLG00015010408	vars2	100	97.704	ENSORLG00020018584	vars2	100	97.704	Oryzias_latipes_hni
ENSORLG00015010408	vars2	100	90.909	ENSOMEG00000008360	vars2	100	90.909	Oryzias_melastigma
ENSORLG00015010408	vars2	95	51.877	ENSOGAG00000006087	VARS2	89	52.935	Otolemur_garnettii
ENSORLG00015010408	vars2	96	50.190	ENSOARG00000010844	VARS2	93	50.775	Ovis_aries
ENSORLG00015010408	vars2	96	50.951	ENSPPAG00000041141	VARS2	92	52.075	Pan_paniscus
ENSORLG00015010408	vars2	94	51.524	ENSPPRG00000006751	VARS2	90	52.569	Panthera_pardus
ENSORLG00015010408	vars2	94	51.429	ENSPTIG00000017799	VARS2	97	52.404	Panthera_tigris_altaica
ENSORLG00015010408	vars2	96	50.951	ENSPTRG00000034497	VARS2	92	52.075	Pan_troglodytes
ENSORLG00015010408	vars2	96	51.236	ENSPANG00000018481	VARS2	92	53.957	Papio_anubis
ENSORLG00015010408	vars2	95	66.473	ENSPKIG00000011372	vars2	92	67.498	Paramormyrops_kingsleyae
ENSORLG00015010408	vars2	58	63.208	ENSPSIG00000006206	VARS2	92	62.946	Pelodiscus_sinensis
ENSORLG00015010408	vars2	96	68.726	ENSPMGG00000000465	vars2	94	70.683	Periophthalmus_magnuspinnatus
ENSORLG00015010408	vars2	96	51.659	ENSPEMG00000014691	Vars2	92	52.750	Peromyscus_maniculatus_bairdii
ENSORLG00015010408	vars2	96	50.718	ENSPCIG00000015040	VARS2	91	52.044	Phascolarctos_cinereus
ENSORLG00015010408	vars2	94	72.444	ENSPFOG00000017616	vars2	94	72.444	Poecilia_formosa
ENSORLG00015010408	vars2	94	72.585	ENSPLAG00000019778	vars2	94	73.267	Poecilia_latipinna
ENSORLG00015010408	vars2	99	70.258	ENSPMEG00000011123	vars2	94	73.069	Poecilia_mexicana
ENSORLG00015010408	vars2	90	66.633	ENSPREG00000014998	vars2	93	66.837	Poecilia_reticulata
ENSORLG00015010408	vars2	96	50.951	ENSPPYG00000016424	VARS2	92	52.174	Pongo_abelii
ENSORLG00015010408	vars2	63	53.667	ENSPCAG00000006946	VARS2	76	53.667	Procavia_capensis
ENSORLG00015010408	vars2	96	50.570	ENSPCOG00000014839	VARS2	91	51.307	Propithecus_coquereli
ENSORLG00015010408	vars2	97	50.000	ENSPVAG00000004197	VARS2	92	51.533	Pteropus_vampyrus
ENSORLG00015010408	vars2	86	78.747	ENSPNYG00000010314	vars2	99	78.747	Pundamilia_nyererei
ENSORLG00015010408	vars2	99	65.693	ENSPNAG00000026793	vars2	94	68.262	Pygocentrus_nattereri
ENSORLG00015010408	vars2	96	50.521	ENSRNOG00000000833	Vars2	92	51.572	Rattus_norvegicus
ENSORLG00015010408	vars2	96	50.570	ENSRBIG00000032725	VARS2	92	51.976	Rhinopithecus_bieti
ENSORLG00015010408	vars2	96	50.760	ENSRROG00000043847	VARS2	92	52.075	Rhinopithecus_roxellana
ENSORLG00015010408	vars2	96	49.907	ENSSBOG00000033240	VARS2	90	51.064	Saimiri_boliviensis_boliviensis
ENSORLG00015010408	vars2	95	51.052	ENSSHAG00000009307	VARS2	92	52.071	Sarcophilus_harrisii
ENSORLG00015010408	vars2	96	66.286	ENSSFOG00015016187	vars2	93	67.387	Scleropages_formosus
ENSORLG00015010408	vars2	99	72.192	ENSSMAG00000020842	vars2	99	72.192	Scophthalmus_maximus
ENSORLG00015010408	vars2	99	74.401	ENSSDUG00000011598	vars2	94	76.870	Seriola_dumerili
ENSORLG00015010408	vars2	91	76.667	ENSSLDG00000015492	vars2	92	76.667	Seriola_lalandi_dorsalis
ENSORLG00015010408	vars2	78	59.064	ENSSPUG00000014700	VARS2	87	59.064	Sphenodon_punctatus
ENSORLG00015010408	vars2	99	71.311	ENSSPAG00000004654	vars2	94	73.058	Stegastes_partitus
ENSORLG00015010408	vars2	96	51.328	ENSSSCG00000001384	VARS2	91	55.761	Sus_scrofa
ENSORLG00015010408	vars2	94	71.078	ENSTRUG00000005264	vars2	94	71.078	Takifugu_rubripes
ENSORLG00015010408	vars2	96	68.069	ENSTNIG00000005916	vars2	93	68.928	Tetraodon_nigroviridis
ENSORLG00015010408	vars2	80	52.381	ENSTTRG00000012243	VARS2	79	61.333	Tursiops_truncatus
ENSORLG00015010408	vars2	97	50.611	ENSUAMG00000026124	VARS2	99	51.848	Ursus_americanus
ENSORLG00015010408	vars2	97	50.659	ENSUMAG00000019894	VARS2	94	51.506	Ursus_maritimus
ENSORLG00015010408	vars2	96	50.997	ENSVVUG00000010754	VARS2	88	51.965	Vulpes_vulpes
ENSORLG00015010408	vars2	89	49.898	ENSXETG00000003036	vars2	99	49.898	Xenopus_tropicalis
ENSORLG00015010408	vars2	97	72.023	ENSXCOG00000003455	vars2	94	75.255	Xiphophorus_couchianus
ENSORLG00015010408	vars2	99	71.915	ENSXMAG00000013523	vars2	95	74.172	Xiphophorus_maculatus