EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSORLG00015010409 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Minus strand
Length: 26237 bases
Position: chr17:3482141-3508377
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015028016	zf-C2H2	PF00096.26	9.1e-17	1	4
ENSORLP00015028016	zf-C2H2	PF00096.26	9.1e-17	2	4
ENSORLP00015028016	zf-C2H2	PF00096.26	9.1e-17	3	4
ENSORLP00015028016	zf-C2H2	PF00096.26	9.1e-17	4	4
ENSORLP00015009601	zf-C2H2	PF00096.26	1.3e-11	1	2
ENSORLP00015009601	zf-C2H2	PF00096.26	1.3e-11	2	2
ENSORLP00015009601	zf-met	PF12874.7	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015015964	-	639	-	ENSORLP00015009601	212 (aa)	-	-
ENSORLT00015031447	-	4095	-	ENSORLP00015028016	407 (aa)	-	-

Gene Model

Click here to download ENSORLG00015010409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015010409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSORLG00015010409	-	59	48.077	ENSORLG00015012339	-	91	46.667
ENSORLG00015010409	-	67	45.763	ENSORLG00015007920	-	97	46.154
ENSORLG00015010409	-	90	48.077	ENSORLG00015011153	-	84	41.593
ENSORLG00015010409	-	59	45.690	ENSORLG00015012187	-	95	45.690
ENSORLG00015010409	-	51	51.786	ENSORLG00015015776	-	95	45.217
ENSORLG00015010409	-	57	54.000	ENSORLG00015012776	-	97	45.690
ENSORLG00015010409	-	50	50.000	ENSORLG00015009384	-	93	41.284
ENSORLG00015010409	-	54	46.154	ENSORLG00015007132	-	58	41.379
ENSORLG00015010409	-	89	50.847	ENSORLG00015007742	-	84	45.690
ENSORLG00015010409	-	54	51.724	ENSORLG00015003796	-	63	46.591
ENSORLG00015010409	-	81	40.678	ENSORLG00015010765	-	57	44.000
ENSORLG00015010409	-	65	40.845	ENSORLG00015013760	prdm5	68	36.975
ENSORLG00015010409	-	90	51.111	ENSORLG00015011730	-	94	44.828
ENSORLG00015010409	-	50	46.429	ENSORLG00015010933	-	91	46.429
ENSORLG00015010409	-	50	54.167	ENSORLG00015016741	-	93	43.333
ENSORLG00015010409	-	96	50.000	ENSORLG00015011871	-	98	48.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015010409	-	50	44.068	ENSDARG00000116177	znf1127	79	42.857	Danio_rerio
ENSORLG00015010409	-	59	49.020	ENSDARG00000100001	znf1096	78	48.387	Danio_rerio
ENSORLG00015010409	-	59	49.020	ENSDARG00000096189	si:dkey-54j5.2	76	44.248	Danio_rerio
ENSORLG00015010409	-	59	49.020	ENSDARG00000115450	CABZ01012382.1	76	44.248	Danio_rerio
ENSORLG00015010409	-	59	49.020	ENSDARG00000109381	CU457778.2	76	44.248	Danio_rerio
ENSORLG00015010409	-	64	52.000	ENSDARG00000099736	CABZ01075078.1	78	44.144	Danio_rerio
ENSORLG00015010409	-	51	50.847	ENSDARG00000095605	CR846087.3	85	44.144	Danio_rerio
ENSORLG00015010409	-	50	52.941	ENSDARG00000103244	CABZ01081752.3	84	41.259	Danio_rerio
ENSORLG00015010409	-	64	52.000	ENSDARG00000098430	znf1078	77	44.144	Danio_rerio
ENSORLG00015010409	-	89	54.000	ENSDARG00000114947	BX465848.1	87	45.045	Danio_rerio
ENSORLG00015010409	-	89	41.935	ENSDARG00000114437	zgc:173705	81	43.363	Danio_rerio
ENSORLG00015010409	-	59	49.123	ENSDARG00000102600	CABZ01003344.1	79	45.045	Danio_rerio
ENSORLG00015010409	-	59	45.614	ENSDARG00000091477	znf1066	81	46.154	Danio_rerio
ENSORLG00015010409	-	54	47.368	ENSPFOG00000022423	-	73	44.444	Poecilia_formosa
ENSORLG00015010409	-	50	50.000	ENSXETG00000031310	-	72	46.087	Xenopus_tropicalis