EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015010475 (Gene tree)
Gene ID: -
Gene Symbol: nom1
Alias: -
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 18697 bases
Position: chr20:20758183-20776879
Accession: ZDB-GENE-060503-321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015028070	MA3	PF02847.17	6.7e-23	1	1
ENSORLP00015009644	MA3	PF02847.17	7.9e-23	1	1
ENSORLP00015028070	MIF4G	PF02854.19	1.5e-18	1	1
ENSORLP00015009644	MIF4G	PF02854.19	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015016017	-	3765	-	ENSORLP00015009644	829 (aa)	-	-
ENSORLT00015016055	-	3807	-	ENSORLP00015028070	767 (aa)	-	-

Gene Model

Click here to download ENSORLG00015010475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015010475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015010475	nom1	98	53.245	ENSG00000146909	NOM1	94	53.121	Homo_sapiens
ENSORLG00015010475	nom1	69	85.929	ENSAPOG00000012073	nom1	100	73.918	Acanthochromis_polyacanthus
ENSORLG00015010475	nom1	90	55.966	ENSAMEG00000001412	NOM1	71	64.522	Ailuropoda_melanoleuca
ENSORLG00015010475	nom1	99	71.669	ENSACIG00000018050	nom1	68	85.932	Amphilophus_citrinellus
ENSORLG00015010475	nom1	69	85.178	ENSAOCG00000006229	nom1	100	73.918	Amphiprion_ocellaris
ENSORLG00015010475	nom1	99	73.106	ENSAPEG00000015994	nom1	100	73.561	Amphiprion_percula
ENSORLG00015010475	nom1	99	72.280	ENSATEG00000005405	nom1	100	72.889	Anabas_testudineus
ENSORLG00015010475	nom1	86	58.383	ENSAPLG00000006585	NOM1	96	57.975	Anas_platyrhynchos
ENSORLG00015010475	nom1	86	56.268	ENSACAG00000011192	NOM1	92	51.716	Anolis_carolinensis
ENSORLG00015010475	nom1	99	74.548	ENSACLG00000000033	nom1	98	73.212	Astatotilapia_calliptera
ENSORLG00015010475	nom1	69	73.585	ENSAMXG00000041486	nom1	98	58.451	Astyanax_mexicanus
ENSORLG00015010475	nom1	97	50.362	ENSBTAG00000016435	NOM1	94	49.880	Bos_taurus
ENSORLG00015010475	nom1	97	51.704	ENSCJAG00000004336	NOM1	94	51.493	Callithrix_jacchus
ENSORLG00015010475	nom1	90	55.271	ENSCAFG00020005121	NOM1	79	54.964	Canis_lupus_dingo
ENSORLG00015010475	nom1	97	52.842	ENSTSYG00000000227	NOM1	93	52.586	Carlito_syrichta
ENSORLG00015010475	nom1	68	66.603	ENSCAPG00000016273	NOM1	97	67.387	Cavia_aperea
ENSORLG00015010475	nom1	97	49.167	ENSCPOG00000025538	NOM1	77	54.571	Cavia_porcellus
ENSORLG00015010475	nom1	89	66.667	ENSCCAG00000014944	NOM1	96	66.570	Cebus_capucinus
ENSORLG00015010475	nom1	89	57.039	ENSCLAG00000000267	NOM1	79	57.122	Chinchilla_lanigera
ENSORLG00015010475	nom1	93	56.414	ENSCPBG00000018215	NOM1	80	68.061	Chrysemys_picta_bellii
ENSORLG00015010475	nom1	91	37.360	ENSCING00000005248	-	92	37.464	Ciona_intestinalis
ENSORLG00015010475	nom1	68	65.399	ENSCANG00000041984	NOM1	88	66.406	Colobus_angolensis_palliatus
ENSORLG00015010475	nom1	90	57.266	ENSCGRG00001020293	Nom1	95	52.259	Cricetulus_griseus_chok1gshd
ENSORLG00015010475	nom1	68	64.952	ENSCGRG00000005405	Nom1	95	66.012	Cricetulus_griseus_crigri
ENSORLG00015010475	nom1	95	68.826	ENSCSEG00000000932	nom1	96	67.614	Cynoglossus_semilaevis
ENSORLG00015010475	nom1	100	72.335	ENSCVAG00000007562	nom1	100	71.599	Cyprinodon_variegatus
ENSORLG00015010475	nom1	100	62.763	ENSDARG00000060027	nom1	100	75.205	Danio_rerio
ENSORLG00015010475	nom1	68	54.373	ENSDORG00000015682	Nom1	97	47.612	Dipodomys_ordii
ENSORLG00015010475	nom1	64	38.614	FBgn0035336	CG9004	60	38.150	Drosophila_melanogaster
ENSORLG00015010475	nom1	80	56.398	ENSETEG00000003104	NOM1	86	57.282	Echinops_telfairi
ENSORLG00015010475	nom1	56	51.376	ENSEBUG00000010077	nom1	89	53.713	Eptatretus_burgeri
ENSORLG00015010475	nom1	90	59.110	ENSEASG00005001489	NOM1	94	53.103	Equus_asinus_asinus
ENSORLG00015010475	nom1	72	63.929	ENSECAG00000007596	NOM1	88	53.054	Equus_caballus
ENSORLG00015010475	nom1	72	77.455	ENSELUG00000006266	nom1	98	67.146	Esox_lucius
ENSORLG00015010475	nom1	90	56.999	ENSFCAG00000006467	NOM1	94	53.014	Felis_catus
ENSORLG00015010475	nom1	89	57.246	ENSFALG00000006904	NOM1	99	57.163	Ficedula_albicollis
ENSORLG00015010475	nom1	97	52.295	ENSFDAG00000016241	NOM1	62	66.078	Fukomys_damarensis
ENSORLG00015010475	nom1	100	71.484	ENSFHEG00000015974	nom1	98	71.273	Fundulus_heteroclitus
ENSORLG00015010475	nom1	99	59.769	ENSGMOG00000005129	nom1	100	62.374	Gadus_morhua
ENSORLG00015010475	nom1	88	57.331	ENSGALG00000006437	NOM1	78	56.882	Gallus_gallus
ENSORLG00015010475	nom1	100	71.319	ENSGAFG00000003211	nom1	100	70.344	Gambusia_affinis
ENSORLG00015010475	nom1	90	57.386	ENSGAGG00000014347	NOM1	83	57.143	Gopherus_agassizii
ENSORLG00015010475	nom1	72	64.337	ENSGGOG00000010920	NOM1	87	52.876	Gorilla_gorilla
ENSORLG00015010475	nom1	99	74.122	ENSHBUG00000014616	nom1	98	73.333	Haplochromis_burtoni
ENSORLG00015010475	nom1	95	55.274	ENSHGLG00000007392	NOM1	95	52.063	Heterocephalus_glaber_female
ENSORLG00015010475	nom1	86	66.561	ENSHGLG00100014407	NOM1	94	67.881	Heterocephalus_glaber_male
ENSORLG00015010475	nom1	68	72.381	ENSIPUG00000013980	nom1	98	59.512	Ictalurus_punctatus
ENSORLG00015010475	nom1	71	63.869	ENSSTOG00000031736	NOM1	89	67.255	Ictidomys_tridecemlineatus
ENSORLG00015010475	nom1	63	67.146	ENSJJAG00000011716	Nom1	96	67.925	Jaculus_jaculus
ENSORLG00015010475	nom1	100	71.895	ENSLBEG00000009252	nom1	100	71.795	Labrus_bergylta
ENSORLG00015010475	nom1	91	60.504	ENSLACG00000011777	NOM1	98	57.143	Latimeria_chalumnae
ENSORLG00015010475	nom1	99	63.802	ENSLOCG00000012452	nom1	100	61.871	Lepisosteus_oculatus
ENSORLG00015010475	nom1	97	47.952	ENSLAFG00000007119	NOM1	96	47.094	Loxodonta_africana
ENSORLG00015010475	nom1	98	49.119	ENSMMUG00000039033	NOM1	94	50.488	Macaca_mulatta
ENSORLG00015010475	nom1	68	65.779	ENSMLEG00000037062	NOM1	96	66.992	Mandrillus_leucophaeus
ENSORLG00015010475	nom1	99	71.611	ENSMAMG00000004118	nom1	100	70.678	Mastacembelus_armatus
ENSORLG00015010475	nom1	99	74.548	ENSMZEG00005000384	nom1	98	73.156	Maylandia_zebra
ENSORLG00015010475	nom1	91	57.768	ENSMGAG00000005051	NOM1	75	66.406	Meleagris_gallopavo
ENSORLG00015010475	nom1	98	52.721	ENSMAUG00000017988	Nom1	94	52.132	Mesocricetus_auratus
ENSORLG00015010475	nom1	97	50.305	ENSMICG00000017531	NOM1	94	51.779	Microcebus_murinus
ENSORLG00015010475	nom1	99	54.128	ENSMOCG00000015962	Nom1	94	52.855	Microtus_ochrogaster
ENSORLG00015010475	nom1	99	66.627	ENSMMOG00000004419	nom1	99	67.368	Mola_mola
ENSORLG00015010475	nom1	98	52.326	ENSMODG00000005177	NOM1	80	57.828	Monodelphis_domestica
ENSORLG00015010475	nom1	93	71.389	ENSMALG00000008800	nom1	99	69.825	Monopterus_albus
ENSORLG00015010475	nom1	98	52.158	MGP_CAROLIEiJ_G0027043	Nom1	93	50.656	Mus_caroli
ENSORLG00015010475	nom1	98	52.153	ENSMUSG00000001569	Nom1	93	51.267	Mus_musculus
ENSORLG00015010475	nom1	98	51.909	MGP_SPRETEiJ_G0028039	Nom1	93	51.741	Mus_spretus
ENSORLG00015010475	nom1	89	53.468	ENSMPUG00000009745	NOM1	98	54.124	Mustela_putorius_furo
ENSORLG00015010475	nom1	76	60.441	ENSMLUG00000009129	NOM1	87	64.639	Myotis_lucifugus
ENSORLG00015010475	nom1	99	74.611	ENSNBRG00000016429	nom1	95	84.499	Neolamprologus_brichardi
ENSORLG00015010475	nom1	98	52.184	ENSNLEG00000000238	NOM1	94	51.621	Nomascus_leucogenys
ENSORLG00015010475	nom1	77	54.502	ENSMEUG00000001108	NOM1	84	53.846	Notamacropus_eugenii
ENSORLG00015010475	nom1	58	53.398	ENSOPRG00000014676	NOM1	69	46.400	Ochotona_princeps
ENSORLG00015010475	nom1	89	56.749	ENSODEG00000009399	NOM1	73	65.234	Octodon_degus
ENSORLG00015010475	nom1	99	74.169	ENSONIG00000005958	nom1	100	74.779	Oreochromis_niloticus
ENSORLG00015010475	nom1	60	67.171	ENSOANG00000006139	-	97	67.609	Ornithorhynchus_anatinus
ENSORLG00015010475	nom1	99	44.387	ENSOCUG00000021448	-	97	53.565	Oryctolagus_cuniculus
ENSORLG00015010475	nom1	100	54.278	ENSOCUG00000004071	-	94	51.986	Oryctolagus_cuniculus
ENSORLG00015010475	nom1	100	98.438	ENSORLG00000010541	nom1	100	98.434	Oryzias_latipes
ENSORLG00015010475	nom1	100	98.435	ENSORLG00020010789	nom1	100	98.435	Oryzias_latipes_hni
ENSORLG00015010475	nom1	100	88.067	ENSOMEG00000004219	nom1	100	88.425	Oryzias_melastigma
ENSORLG00015010475	nom1	76	62.010	ENSOGAG00000001124	NOM1	84	67.578	Otolemur_garnettii
ENSORLG00015010475	nom1	89	54.266	ENSOARG00000007261	NOM1	71	63.585	Ovis_aries
ENSORLG00015010475	nom1	90	57.692	ENSPPAG00000041374	NOM1	94	52.876	Pan_paniscus
ENSORLG00015010475	nom1	90	56.628	ENSPTIG00000013532	NOM1	93	56.604	Panthera_tigris_altaica
ENSORLG00015010475	nom1	98	51.905	ENSPTRG00000019917	NOM1	94	52.876	Pan_troglodytes
ENSORLG00015010475	nom1	98	53.310	ENSPANG00000007605	NOM1	94	52.445	Papio_anubis
ENSORLG00015010475	nom1	100	57.969	ENSPKIG00000005825	nom1	100	57.651	Paramormyrops_kingsleyae
ENSORLG00015010475	nom1	70	66.605	ENSPSIG00000017848	NOM1	90	66.605	Pelodiscus_sinensis
ENSORLG00015010475	nom1	99	69.870	ENSPMGG00000002577	nom1	100	69.820	Periophthalmus_magnuspinnatus
ENSORLG00015010475	nom1	98	52.969	ENSPEMG00000024180	Nom1	93	52.163	Peromyscus_maniculatus_bairdii
ENSORLG00015010475	nom1	98	51.442	ENSPCIG00000027941	NOM1	77	56.944	Phascolarctos_cinereus
ENSORLG00015010475	nom1	100	71.338	ENSPFOG00000015771	nom1	100	70.804	Poecilia_formosa
ENSORLG00015010475	nom1	70	81.716	ENSPLAG00000007856	nom1	100	69.359	Poecilia_latipinna
ENSORLG00015010475	nom1	100	71.720	ENSPMEG00000014155	nom1	100	70.922	Poecilia_mexicana
ENSORLG00015010475	nom1	100	70.090	ENSPREG00000008850	nom1	100	69.798	Poecilia_reticulata
ENSORLG00015010475	nom1	98	50.120	ENSPPYG00000018222	NOM1	94	49.337	Pongo_abelii
ENSORLG00015010475	nom1	70	60.698	ENSPCAG00000000440	NOM1	79	60.698	Procavia_capensis
ENSORLG00015010475	nom1	69	64.474	ENSPCOG00000015222	NOM1	97	65.444	Propithecus_coquereli
ENSORLG00015010475	nom1	90	55.460	ENSPVAG00000014760	NOM1	94	50.061	Pteropus_vampyrus
ENSORLG00015010475	nom1	99	74.548	ENSPNYG00000006975	nom1	96	83.835	Pundamilia_nyererei
ENSORLG00015010475	nom1	72	70.962	ENSPNAG00000011085	nom1	90	73.524	Pygocentrus_nattereri
ENSORLG00015010475	nom1	98	53.183	ENSRNOG00000048969	AABR07059041.1	82	54.862	Rattus_norvegicus
ENSORLG00015010475	nom1	98	52.719	ENSRBIG00000037042	NOM1	94	52.433	Rhinopithecus_bieti
ENSORLG00015010475	nom1	98	52.482	ENSRROG00000037293	NOM1	94	52.190	Rhinopithecus_roxellana
ENSORLG00015010475	nom1	54	61.353	ENSSHAG00000002835	-	100	61.353	Sarcophilus_harrisii
ENSORLG00015010475	nom1	90	58.499	ENSSHAG00000017998	-	98	58.453	Sarcophilus_harrisii
ENSORLG00015010475	nom1	63	70.807	ENSSFOG00015003196	nom1	99	70.807	Scleropages_formosus
ENSORLG00015010475	nom1	100	71.479	ENSSMAG00000011047	nom1	100	70.740	Scophthalmus_maximus
ENSORLG00015010475	nom1	100	72.919	ENSSDUG00000006834	nom1	100	73.474	Seriola_dumerili
ENSORLG00015010475	nom1	69	84.053	ENSSLDG00000021812	nom1	100	72.877	Seriola_lalandi_dorsalis
ENSORLG00015010475	nom1	91	49.581	ENSSPUG00000002556	NOM1	89	66.667	Sphenodon_punctatus
ENSORLG00015010475	nom1	100	73.563	ENSSPAG00000000953	nom1	93	73.358	Stegastes_partitus
ENSORLG00015010475	nom1	89	57.826	ENSTGUG00000000702	-	75	65.970	Taeniopygia_guttata
ENSORLG00015010475	nom1	99	67.788	ENSTRUG00000010239	nom1	100	67.619	Takifugu_rubripes
ENSORLG00015010475	nom1	99	67.009	ENSTNIG00000012783	nom1	100	67.803	Tetraodon_nigroviridis
ENSORLG00015010475	nom1	95	52.222	ENSTTRG00000009691	NOM1	94	51.238	Tursiops_truncatus
ENSORLG00015010475	nom1	90	56.250	ENSUAMG00000025450	NOM1	94	51.371	Ursus_americanus
ENSORLG00015010475	nom1	90	56.590	ENSUMAG00000014275	NOM1	94	57.019	Ursus_maritimus
ENSORLG00015010475	nom1	90	55.301	ENSVVUG00000002608	NOM1	77	67.464	Vulpes_vulpes
ENSORLG00015010475	nom1	98	52.345	ENSXETG00000021611	nom1	82	69.756	Xenopus_tropicalis
ENSORLG00015010475	nom1	100	71.392	ENSXMAG00000002451	nom1	99	70.749	Xiphophorus_maculatus