EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSORLG00015010733 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Oryzias_latipes_hsok
Status: putative
Strand: Plus strand
Length: 8538 bases
Position: chr4:32084585-32093122
Accession: 101158935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSORLP00015028237	RRM_1	PF00076.22	4e-14	1	1
ENSORLP00015028237	SAP	PF02037.27	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSORLT00015031566	-	3215	XM_011474532	ENSORLP00015028237	805 (aa)	XP_011472834	-

Gene Model

Click here to download ENSORLG00015010733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSORLG00015010733's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSORLG00015010733	safb	66	39.524	ENSG00000160633	SAFB	78	63.934	Homo_sapiens
ENSORLG00015010733	safb	100	77.764	ENSAPOG00000022508	safb	98	78.282	Acanthochromis_polyacanthus
ENSORLG00015010733	safb	67	40.939	ENSAMEG00000012254	SAFB	95	42.444	Ailuropoda_melanoleuca
ENSORLG00015010733	safb	100	70.545	ENSACIG00000006247	safb	98	70.756	Amphilophus_citrinellus
ENSORLG00015010733	safb	95	77.146	ENSAOCG00000006308	safb	100	76.894	Amphiprion_ocellaris
ENSORLG00015010733	safb	100	76.831	ENSAPEG00000023342	safb	98	77.206	Amphiprion_percula
ENSORLG00015010733	safb	100	74.140	ENSATEG00000004998	safb	98	75.182	Anabas_testudineus
ENSORLG00015010733	safb	60	42.105	ENSAPLG00000006355	-	99	46.707	Anas_platyrhynchos
ENSORLG00015010733	safb	60	39.789	ENSAPLG00000005780	-	97	43.554	Anas_platyrhynchos
ENSORLG00015010733	safb	66	42.173	ENSANAG00000028821	SAFB	94	43.307	Aotus_nancymaae
ENSORLG00015010733	safb	100	72.804	ENSACLG00000001926	safb	98	73.219	Astatotilapia_calliptera
ENSORLG00015010733	safb	97	58.907	ENSAMXG00000018154	safb	96	59.788	Astyanax_mexicanus
ENSORLG00015010733	safb	98	42.484	ENSBTAG00000007875	SAFB	95	42.506	Bos_taurus
ENSORLG00015010733	safb	67	41.290	ENSCAFG00000018803	SAFB	81	42.793	Canis_familiaris
ENSORLG00015010733	safb	67	41.290	ENSCAFG00020018943	SAFB	94	42.667	Canis_lupus_dingo
ENSORLG00015010733	safb	60	49.472	ENSCHIG00000007262	SAFB	95	42.603	Capra_hircus
ENSORLG00015010733	safb	58	41.894	ENSTSYG00000001851	-	95	42.023	Carlito_syrichta
ENSORLG00015010733	safb	64	42.664	ENSCCAG00000020193	SAFB	94	43.082	Cebus_capucinus
ENSORLG00015010733	safb	66	39.524	ENSCATG00000029994	SAFB	94	41.594	Cercocebus_atys
ENSORLG00015010733	safb	66	39.524	ENSCSAG00000009949	SAFB	94	41.594	Chlorocebus_sabaeus
ENSORLG00015010733	safb	92	42.543	ENSCPBG00000010928	-	96	44.205	Chrysemys_picta_bellii
ENSORLG00015010733	safb	88	44.005	ENSCPBG00000010936	-	96	45.191	Chrysemys_picta_bellii
ENSORLG00015010733	safb	94	40.297	ENSCANG00000019754	-	93	40.378	Colobus_angolensis_palliatus
ENSORLG00015010733	safb	95	35.605	ENSCANG00000004774	-	60	64.706	Colobus_angolensis_palliatus
ENSORLG00015010733	safb	65	63.019	ENSCSEG00000019870	safb	98	65.409	Cynoglossus_semilaevis
ENSORLG00015010733	safb	100	66.667	ENSCVAG00000002226	safb	98	66.709	Cyprinodon_variegatus
ENSORLG00015010733	safb	96	57.826	ENSDARG00000020467	safb	96	57.738	Danio_rerio
ENSORLG00015010733	safb	68	39.810	ENSDNOG00000015746	SAFB	95	41.379	Dasypus_novemcinctus
ENSORLG00015010733	safb	99	60.162	ENSELUG00000022327	safb	98	59.587	Esox_lucius
ENSORLG00015010733	safb	67	42.812	ENSFCAG00000011835	SAFB	94	42.810	Felis_catus
ENSORLG00015010733	safb	65	43.449	ENSFALG00000013882	-	87	45.190	Ficedula_albicollis
ENSORLG00015010733	safb	56	40.787	ENSFALG00000013881	-	96	44.131	Ficedula_albicollis
ENSORLG00015010733	safb	100	67.809	ENSFHEG00000004219	safb	98	67.875	Fundulus_heteroclitus
ENSORLG00015010733	safb	100	63.246	ENSGMOG00000014280	safb	98	64.190	Gadus_morhua
ENSORLG00015010733	safb	66	43.089	ENSGALG00000013365	-	96	44.714	Gallus_gallus
ENSORLG00015010733	safb	64	43.910	ENSGALG00000001948	-	95	47.198	Gallus_gallus
ENSORLG00015010733	safb	100	64.167	ENSGAFG00000016162	safb	98	64.442	Gambusia_affinis
ENSORLG00015010733	safb	100	69.294	ENSGACG00000011385	safb	98	69.508	Gasterosteus_aculeatus
ENSORLG00015010733	safb	94	47.111	ENSGAGG00000008424	-	97	47.951	Gopherus_agassizii
ENSORLG00015010733	safb	66	47.463	ENSGAGG00000017702	-	87	52.797	Gopherus_agassizii
ENSORLG00015010733	safb	66	39.683	ENSGGOG00000015109	SAFB	94	41.788	Gorilla_gorilla
ENSORLG00015010733	safb	100	64.970	ENSHBUG00000009218	safb	98	68.564	Haplochromis_burtoni
ENSORLG00015010733	safb	94	62.901	ENSHCOG00000001705	safb	98	64.512	Hippocampus_comes
ENSORLG00015010733	safb	99	58.872	ENSIPUG00000024869	safb2	99	59.953	Ictalurus_punctatus
ENSORLG00015010733	safb	60	37.436	ENSSTOG00000002783	SAFB	97	39.840	Ictidomys_tridecemlineatus
ENSORLG00015010733	safb	100	76.265	ENSKMAG00000022308	safb	98	76.876	Kryptolebias_marmoratus
ENSORLG00015010733	safb	100	73.113	ENSLBEG00000006015	safb	98	73.165	Labrus_bergylta
ENSORLG00015010733	safb	66	42.233	ENSLACG00000018090	SAFB	97	47.091	Latimeria_chalumnae
ENSORLG00015010733	safb	98	59.633	ENSLOCG00000003613	safb	98	59.860	Lepisosteus_oculatus
ENSORLG00015010733	safb	95	41.003	ENSLAFG00000003840	SAFB	95	42.841	Loxodonta_africana
ENSORLG00015010733	safb	64	39.799	ENSMFAG00000003885	SAFB	94	41.899	Macaca_fascicularis
ENSORLG00015010733	safb	95	41.275	ENSMMUG00000017970	SAFB	94	43.216	Macaca_mulatta
ENSORLG00015010733	safb	67	39.234	ENSMNEG00000035637	SAFB	94	41.611	Macaca_nemestrina
ENSORLG00015010733	safb	68	37.660	ENSMLEG00000038637	SAFB	94	41.117	Mandrillus_leucophaeus
ENSORLG00015010733	safb	100	75.060	ENSMAMG00000003357	safb	90	75.152	Mastacembelus_armatus
ENSORLG00015010733	safb	100	74.941	ENSMZEG00005009120	safb	98	75.152	Maylandia_zebra
ENSORLG00015010733	safb	64	40.000	ENSMGAG00000001101	-	97	43.512	Meleagris_gallopavo
ENSORLG00015010733	safb	64	43.894	ENSMGAG00000001051	-	78	56.410	Meleagris_gallopavo
ENSORLG00015010733	safb	64	42.478	ENSMICG00000008739	-	95	42.198	Microcebus_murinus
ENSORLG00015010733	safb	86	38.060	ENSMICG00000046795	-	68	68.116	Microcebus_murinus
ENSORLG00015010733	safb	94	42.746	ENSMODG00000001236	SAFB	93	43.080	Monodelphis_domestica
ENSORLG00015010733	safb	100	73.294	ENSMALG00000020330	safb	100	73.424	Monopterus_albus
ENSORLG00015010733	safb	98	41.747	ENSMLUG00000001081	SAFB	94	42.031	Myotis_lucifugus
ENSORLG00015010733	safb	66	40.032	ENSNLEG00000013551	SAFB	97	41.583	Nomascus_leucogenys
ENSORLG00015010733	safb	60	39.399	ENSOPRG00000011561	-	98	40.405	Ochotona_princeps
ENSORLG00015010733	safb	100	74.408	ENSONIG00000002318	safb	98	74.970	Oreochromis_niloticus
ENSORLG00015010733	safb	87	38.452	ENSOCUG00000014628	SAFB	96	38.072	Oryctolagus_cuniculus
ENSORLG00015010733	safb	100	98.637	ENSORLG00000016989	safb	100	98.637	Oryzias_latipes
ENSORLG00015010733	safb	98	87.089	ENSORLG00020000404	safb	100	87.376	Oryzias_latipes_hni
ENSORLG00015010733	safb	100	90.741	ENSOMEG00000009066	safb	98	91.184	Oryzias_melastigma
ENSORLG00015010733	safb	64	41.402	ENSOGAG00000027769	SAFB	94	41.704	Otolemur_garnettii
ENSORLG00015010733	safb	60	44.444	ENSOARG00000007662	-	95	39.618	Ovis_aries
ENSORLG00015010733	safb	64	40.894	ENSPPAG00000035129	SAFB	94	41.630	Pan_paniscus
ENSORLG00015010733	safb	67	42.812	ENSPPRG00000017197	SAFB	94	42.810	Panthera_pardus
ENSORLG00015010733	safb	64	39.967	ENSPTRG00000010335	SAFB	94	41.538	Pan_troglodytes
ENSORLG00015010733	safb	64	39.632	ENSPANG00000007770	SAFB	94	41.899	Papio_anubis
ENSORLG00015010733	safb	99	57.534	ENSPKIG00000009902	safb	98	59.170	Paramormyrops_kingsleyae
ENSORLG00015010733	safb	94	44.878	ENSPSIG00000011679	-	96	46.341	Pelodiscus_sinensis
ENSORLG00015010733	safb	98	44.637	ENSPSIG00000009367	-	94	44.912	Pelodiscus_sinensis
ENSORLG00015010733	safb	100	67.853	ENSPFOG00000007745	safb	98	68.045	Poecilia_formosa
ENSORLG00015010733	safb	100	64.588	ENSPLAG00000001614	safb	98	65.108	Poecilia_latipinna
ENSORLG00015010733	safb	100	67.730	ENSPMEG00000021023	safb	100	67.571	Poecilia_mexicana
ENSORLG00015010733	safb	100	65.745	ENSPREG00000012496	safb	98	66.379	Poecilia_reticulata
ENSORLG00015010733	safb	66	39.524	ENSPPYG00000009428	SAFB	94	40.964	Pongo_abelii
ENSORLG00015010733	safb	64	37.748	ENSPCAG00000006475	SAFB	94	40.089	Procavia_capensis
ENSORLG00015010733	safb	95	40.300	ENSPCOG00000014090	SAFB	94	40.435	Propithecus_coquereli
ENSORLG00015010733	safb	74	53.636	ENSPVAG00000004913	SAFB	69	53.636	Pteropus_vampyrus
ENSORLG00015010733	safb	99	57.865	ENSPNAG00000021838	safb	97	59.390	Pygocentrus_nattereri
ENSORLG00015010733	safb	64	42.021	ENSRBIG00000042509	SAFB	94	42.959	Rhinopithecus_bieti
ENSORLG00015010733	safb	64	40.433	ENSRROG00000029278	SAFB	94	42.205	Rhinopithecus_roxellana
ENSORLG00015010733	safb	66	41.853	ENSSBOG00000026291	SAFB	94	42.652	Saimiri_boliviensis_boliviensis
ENSORLG00015010733	safb	99	57.143	ENSSFOG00015008156	safb	97	58.148	Scleropages_formosus
ENSORLG00015010733	safb	100	74.524	ENSSMAG00000009316	safb	98	75.091	Scophthalmus_maximus
ENSORLG00015010733	safb	100	71.514	ENSSDUG00000009652	safb	98	72.270	Seriola_dumerili
ENSORLG00015010733	safb	100	75.689	ENSSLDG00000001670	safb	98	76.284	Seriola_lalandi_dorsalis
ENSORLG00015010733	safb	60	39.789	ENSSARG00000010475	SAFB	97	40.398	Sorex_araneus
ENSORLG00015010733	safb	53	40.080	ENSSPUG00000009747	-	97	39.338	Sphenodon_punctatus
ENSORLG00015010733	safb	51	40.546	ENSSPUG00000009820	-	99	44.334	Sphenodon_punctatus
ENSORLG00015010733	safb	99	69.361	ENSSPAG00000015682	safb	98	69.951	Stegastes_partitus
ENSORLG00015010733	safb	65	42.693	ENSTGUG00000000502	-	97	44.469	Taeniopygia_guttata
ENSORLG00015010733	safb	64	43.456	ENSTGUG00000000489	-	96	46.441	Taeniopygia_guttata
ENSORLG00015010733	safb	100	71.429	ENSTRUG00000003567	safb	98	71.446	Takifugu_rubripes
ENSORLG00015010733	safb	78	68.943	ENSTNIG00000015470	safb	100	60.658	Tetraodon_nigroviridis
ENSORLG00015010733	safb	65	77.778	ENSTTRG00000013588	SAFB	61	77.778	Tursiops_truncatus
ENSORLG00015010733	safb	76	41.234	ENSUMAG00000009734	SAFB	85	42.640	Ursus_maritimus
ENSORLG00015010733	safb	67	41.290	ENSVVUG00000013720	SAFB	81	43.031	Vulpes_vulpes
ENSORLG00015010733	safb	64	43.174	ENSXETG00000008755	safb	97	45.064	Xenopus_tropicalis
ENSORLG00015010733	safb	100	67.975	ENSXMAG00000003458	safb	98	68.045	Xiphophorus_maculatus